GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002447-TA|BGIBMGA002447-PA|undefined
         (133 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   2.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   3.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   3.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   4.6  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   4.6  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    22   6.0  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 70  MKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGTCCKKYSASIK 128
           + T +DI  K++  P+++   K  +  +S K+  +LFEL         T C+ +S  I+
Sbjct: 279 VSTHKDILRKLKADPELQSFGKQVVRIRSTKNGGLLFELKKS----DQTECESFSGKIQ 333


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 50   YRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQM 86
            ++K+ +  A   S     ++ K F D+   VQ+Y Q+
Sbjct: 3179 FKKKPEQQAHEVSTLEHSQIDKQFHDLKQTVQEYRQL 3215


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 50   YRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQM 86
            ++K+ +  A   S     ++ K F D+   VQ+Y Q+
Sbjct: 3182 FKKKPEQQAHEVSTLEHSQIDKQFHDLKQTVQEYRQL 3218


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 18  SPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDIP 77
           S  + P   PD +R        K   LD     + QQQ   + P   L ++   +  + P
Sbjct: 438 SAMSGPIATPDTSRPAKSVKLFKPYLLDEEPKQQSQQQ---QRPDSALAEDDKDSTRESP 494

Query: 78  SKVQQYPQMRR 88
           + V+Q+ Q ++
Sbjct: 495 AIVEQHHQQQQ 505


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 8   SGAAKKPQIPSPATSPSVMPDAARTF 33
           + A+  P IPS + SP+   D ++T+
Sbjct: 163 ASASTPPTIPSASPSPTRSTDLSQTY 188


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 11  AKKPQIPSPATSPSVMPDAARTFIKRPE 38
           A K Q P+ A  P    +   T  KRP+
Sbjct: 95  APKKQAPAKAKEPKAKAERQSTLRKRPK 122


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.129    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,585
Number of Sequences: 2123
Number of extensions: 4766
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 6
length of query: 133
length of database: 516,269
effective HSP length: 58
effective length of query: 75
effective length of database: 393,135
effective search space: 29485125
effective search space used: 29485125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)