Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002447-TA|BGIBMGA002447-PA|undefined
(133 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-14|CAA86324.2| 442|Caenorhabditis elegans Hypothetical p... 34 0.039
Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical pr... 32 0.12
Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical pr... 32 0.12
AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type tran... 32 0.12
AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like tran... 32 0.12
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.21
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.21
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.21
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.21
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 31 0.36
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 31 0.36
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 31 0.36
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 0.48
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 0.48
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 30 0.48
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 30 0.48
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 30 0.48
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 30 0.48
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 30 0.48
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 30 0.48
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 0.63
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 0.63
AL021487-3|CAA16354.1| 75|Caenorhabditis elegans Hypothetical ... 29 0.84
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z82263-5|CAB62795.1| 75|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 28 2.6
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 2.6
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 2.6
Z92780-2|CAB07177.1| 115|Caenorhabditis elegans Hypothetical pr... 27 3.4
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 27 3.4
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 27 3.4
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 27 3.4
AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related p... 27 4.5
U49830-2|AAV58878.1| 324|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 27 5.9
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z77656-2|CAE17769.1| 724|Caenorhabditis elegans Hypothetical pr... 26 7.8
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 26 7.8
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 26 7.8
>Z46242-14|CAA86324.2| 442|Caenorhabditis elegans Hypothetical
protein F35G12.1a protein.
Length = 442
Score = 33.9 bits (74), Expect = 0.039
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 18 SPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAE--TPSDQLLQEVMKTFED 75
+P T S+ D + E ++ LY K Q Y E T + ++K+ +
Sbjct: 48 TPETRKSIFVDLVTNYGVNKEALNHAIS---LYSKNDQMYPEVRTSATASYVNLIKSIGN 104
Query: 76 IPSKVQQYPQMRRDIKSFLESQSDKS 101
+P V Q +MR +I + L+ ++DK+
Sbjct: 105 LPGGVMQVCEMRANILALLKRETDKT 130
>Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical
protein F33H1.1b protein.
Length = 805
Score = 32.3 bits (70), Expect = 0.12
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDI 76
P P+TS + I+ P KR+ LD L+RK+ + S + ++ KT ++
Sbjct: 6 PVPSTSSVLSAAEKNVKIETPSRKRKGLDIDALWRKKFKDVENQKSPEKSEKSEKTIKEE 65
Query: 77 PSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGT 118
P ++ +P R ++S + K + L + +H+ I+ + +
Sbjct: 66 P--LETHPSGERKLRS-----ASKDSKSLSKETHNTISTRSS 100
>Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical
protein F33H1.1a protein.
Length = 780
Score = 32.3 bits (70), Expect = 0.12
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDI 76
P P+TS + I+ P KR+ LD L+RK+ + S + ++ KT ++
Sbjct: 6 PVPSTSSVLSAAEKNVKIETPSRKRKGLDIDALWRKKFKDVENQKSPEKSEKSEKTIKEE 65
Query: 77 PSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGT 118
P ++ +P R ++S + K + L + +H+ I+ + +
Sbjct: 66 P--LETHPSGERKLRS-----ASKDSKSLSKETHNTISTRSS 100
>AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type
transcription factor DAF-19 short variant protein.
Length = 780
Score = 32.3 bits (70), Expect = 0.12
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDI 76
P P+TS + I+ P KR+ LD L+RK+ + S + ++ KT ++
Sbjct: 6 PVPSTSSVLSAAEKNVKIETPSRKRKGLDIDALWRKKFKDVENQKSPEKSEKSEKTIKEE 65
Query: 77 PSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGT 118
P ++ +P R ++S + K + L + +H+ I+ + +
Sbjct: 66 P--LETHPSGERKLRS-----ASKDSKSLSKETHNTISTRSS 100
>AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like
transcription factor DAF-19 protein.
Length = 805
Score = 32.3 bits (70), Expect = 0.12
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDI 76
P P+TS + I+ P KR+ LD L+RK+ + S + ++ KT ++
Sbjct: 6 PVPSTSSVLSAAEKNVKIETPSRKRKGLDIDALWRKKFKDVENQKSPEKSEKSEKTIKEE 65
Query: 77 PSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGT 118
P ++ +P R ++S + K + L + +H+ I+ + +
Sbjct: 66 P--LETHPSGERKLRS-----ASKDSKSLSKETHNTISTRSS 100
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.21
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSD 63
T T K P+ SPA+ A +K P K +S + K + D
Sbjct: 1397 TKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGD 1456
Query: 64 QLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVK 116
++ + K+ P+K ++ P+ D+KS ++ + + E+S + K
Sbjct: 1457 EVKE---KSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEK 1506
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.21
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSD 63
T T K P+ SPA+ A +K P K +S + K + D
Sbjct: 1397 TKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGD 1456
Query: 64 QLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVK 116
++ + K+ P+K ++ P+ D+KS ++ + + E+S + K
Sbjct: 1457 EVKE---KSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEK 1506
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.5 bits (68), Expect = 0.21
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSD 63
T T K P+ SPA+ A +K P K +S + K + D
Sbjct: 1397 TKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGD 1456
Query: 64 QLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVK 116
++ + K+ P+K ++ P+ D+KS ++ + + E+S + K
Sbjct: 1457 EVKE---KSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEK 1506
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.5 bits (68), Expect = 0.21
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSD 63
T T K P+ SPA+ A +K P K +S + K + D
Sbjct: 1397 TKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGD 1456
Query: 64 QLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVK 116
++ + K+ P+K ++ P+ D+KS ++ + + E+S + K
Sbjct: 1457 EVKE---KSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEK 1506
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSL--DNMDLYRKQQQYYAETPSDQLLQEVMKTFE 74
P P P+ P +TF R E +++ + D DL + Q+Y +++ EV K+ +
Sbjct: 412 PPPTKRPAPPPRFKKTFKPRSEEEKKKIIGDCEDLPDLEDQWYLRAALNEMQSEV-KSAD 470
Query: 75 DIP-SKVQQYPQMRR 88
++P K+ + +M R
Sbjct: 471 ELPWKKMLTFKEMLR 485
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSL--DNMDLYRKQQQYYAETPSDQLLQEVMKTFE 74
P P P+ P +TF R E +++ + D DL + Q+Y +++ EV K+ +
Sbjct: 1183 PPPTKRPAPPPRFKKTFKPRSEEEKKKIIGDCEDLPDLEDQWYLRAALNEMQSEV-KSAD 1241
Query: 75 DIP-SKVQQYPQMRR 88
++P K+ + +M R
Sbjct: 1242 ELPWKKMLTFKEMLR 1256
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSL--DNMDLYRKQQQYYAETPSDQLLQEVMKTFE 74
P P P+ P +TF R E +++ + D DL + Q+Y +++ EV K+ +
Sbjct: 1180 PPPTKRPAPPPRFKKTFKPRSEEEKKKIIGDCEDLPDLEDQWYLRAALNEMQSEV-KSAD 1238
Query: 75 DIP-SKVQQYPQMRR 88
++P K+ + +M R
Sbjct: 1239 ELPWKKMLTFKEMLR 1253
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 63 DQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFL 94
+Q+ E+ K + +PS V+Q+ Q+++DI SFL
Sbjct: 1694 EQVEVELDKHRDKVPSLVEQHEQLKKDIDSFL 1725
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 63 DQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFL 94
+Q+ E+ K + +PS V+Q+ Q+++DI SFL
Sbjct: 1694 EQVEVELDKHRDKVPSLVEQHEQLKKDIDSFL 1725
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 TPTTSGAAKKPQIPSPATSPS--VMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
T + SG K Q PS S + VMP R T+R ++ + + +QQQY + P
Sbjct: 214 THSESGGRKDYQDPSRYISSNSFVMPSNMRPSFPSNSTRRNTVHHRGEHPQQQQYQQQPP 273
Query: 62 S 62
S
Sbjct: 274 S 274
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 TPTTSGAAKKPQIPSPATSPS--VMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
T + SG K Q PS S + VMP R T+R ++ + + +QQQY + P
Sbjct: 262 THSESGGRKDYQDPSRYISSNSFVMPSNMRPSFPSNSTRRNTVHHRGEHPQQQQYQQQPP 321
Query: 62 S 62
S
Sbjct: 322 S 322
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 TPTTSGAAKKPQIPSPATSPS--VMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
T + SG K Q PS S + VMP R T+R ++ + + +QQQY + P
Sbjct: 418 THSESGGRKDYQDPSRYISSNSFVMPSNMRPSFPSNSTRRNTVHHRGEHPQQQQYQQQPP 477
Query: 62 S 62
S
Sbjct: 478 S 478
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 TPTTSGAAKKPQIPSPATSPS--VMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
T + SG K Q PS S + VMP R T+R ++ + + +QQQY + P
Sbjct: 418 THSESGGRKDYQDPSRYISSNSFVMPSNMRPSFPSNSTRRNTVHHRGEHPQQQQYQQQPP 477
Query: 62 S 62
S
Sbjct: 478 S 478
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 4 TPTTSGAAKKPQIPSPATSPS--VMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
T + SG K Q PS S + VMP R T+R ++ + + +QQQY + P
Sbjct: 262 THSESGGRKDYQDPSRYISSNSFVMPSNMRPSFPSNSTRRNTVHHRGEHPQQQQYQQQPP 321
Query: 62 S 62
S
Sbjct: 322 S 322
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 63 DQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFL 94
+Q+ E+ K + +PS V+Q+ Q+++DI SFL
Sbjct: 1694 EQVEVELDKHRDKVPSLVEQHEQLKKDIDSFL 1725
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 0.63
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 2 FHTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
F T G A Q P P T+ ++ + KRR L+N +LY++++ AE
Sbjct: 466 FGNETPRGPASDYQYP-PVTASTLCHRLIHFATQLSTAKRRVLENPELYKREKMTKAEQR 524
Query: 62 SDQLLQEVMKTFEDIPSKV 80
+ + + V + D+P K+
Sbjct: 525 ARRKM--VREKIADMPGKL 541
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 0.63
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 2 FHTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
F T G A Q P P T+ ++ + KRR L+N +LY++++ AE
Sbjct: 466 FGNETPRGPASDYQYP-PVTASTLCHRLIHFATQLSTAKRRVLENPELYKREKMTKAEQR 524
Query: 62 SDQLLQEVMKTFEDIPSKV 80
+ + + V + D+P K+
Sbjct: 525 ARRKM--VREKIADMPGKL 541
>AL021487-3|CAA16354.1| 75|Caenorhabditis elegans Hypothetical
protein Y45F10B.3 protein.
Length = 75
Score = 29.5 bits (63), Expect = 0.84
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRS 43
P + A KP P PA +P+ P A + K+ T ++S
Sbjct: 34 PPKTAEAPKPAPPPPAPAPAAAPSAGKYQYKKSSTYQKS 72
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQ 64
P + ++ P SPS D R + + P +RRS DN +R + + Y + D+
Sbjct: 346 PEVKRSHQRSPSPRRRRSPSPKKDKKRDYRREPARRRRSSDN---HRDRDRSYRDNNRDR 402
>Z82263-5|CAB62795.1| 75|Caenorhabditis elegans Hypothetical
protein C47A4.5 protein.
Length = 75
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRS 43
P + A KP P PA +P+ P + K+ T ++S
Sbjct: 34 PPKTAEAPKPAPPPPAPAPAAAPSTGKYQYKKSSTYQKS 72
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQ 64
P + ++ P SPS D R + + P +RRS DN +R + + Y + D+
Sbjct: 346 PEVKRSHQRSPSPRRRRSPSPKKDKKRDYRREPARRRRSSDN---HRDRDRSYRDNNRDR 402
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQ 64
P + ++ P SPS D R + + P +RRS DN +R + + Y + D+
Sbjct: 277 PEVKRSHQRSPSPRRRRSPSPKKDKKRDYRREPARRRRSSDN---HRDRDRSYRDNNRDR 333
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 61 PSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQ 97
P+D LLQ V KT ++P++ + P +R I +LE Q
Sbjct: 629 PTDILLQNVEKTHVNVPNEEEDAPILRSRI-DWLEMQ 664
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
TPT S + P++P P SPS A T P T R D +R Y E P
Sbjct: 354 TPTASSSGGYPRVPVPRHSPSFTSSA--TVYPLPGTGGRPRFGSDAHR---HLYEEVP 406
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 27.9 bits (59), Expect = 2.6
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETP 61
TPT S + P++P P SPS A T P T R D +R Y E P
Sbjct: 354 TPTASSSGGYPRVPVPRHSPSFTSSA--TVYPLPGTGGRPRFGSDAHR---HLYEEVP 406
>Z92780-2|CAB07177.1| 115|Caenorhabditis elegans Hypothetical
protein C45G3.4 protein.
Length = 115
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 16 IPSPATSPSVMPDAARTFIKRPETKRRSLDN-MDLYRKQQQYYAETPSDQLLQEVM 70
+P P TS S P ++ + I++ + KR+ N + Y +TP +LL + +
Sbjct: 58 LPPPPTSSSPRPTSSNSIIQKSDGKRKDQKNEKQASPIIVEVYDDTPQSKLLPKFL 113
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 27.5 bits (58), Expect = 3.4
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 4 TPTTSGA-AKKPQI-PSPATSPSVMP-DAARTFIKRPETKRRSLDNMDLYRKQQQYYAET 60
TP T A + P I PS ATS S M D ++ +R + ++R++ RK++ +
Sbjct: 331 TPNTFRAPSPAPSIAPSVATSVSAMEHDTIESYYER-QAQKRAMQKEQNMRKRRVDDVKM 389
Query: 61 PSDQLLQEVMKTFEDIPSKVQQYPQMRR 88
+ + ++ M F DI +++ P R+
Sbjct: 390 ITGEEMKGNMADFSDILTRLDLAPPSRK 417
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQ 64
P+TS A + SP++ P+ A T K +K+ SLDN R++ Q + P Q
Sbjct: 311 PSTSSVANSQRREGGGQSPTLTPENANTIEK---SKKVSLDNSK--RREVQKQRKRPQKQ 365
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 50 YRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDI 90
YRK ++ D+ ++E + EDI + ++Y ++R+DI
Sbjct: 364 YRKSREIEEPVVVDRFVEEEVDEKEDIDAIFEKYRKVRKDI 404
>AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related
protein 1 protein.
Length = 455
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 52 KQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQM 86
+QQQ + P+ ++ +++++ FED+ K Q Q+
Sbjct: 98 QQQQEQTKAPTQKMEEDLVQFFEDVTIKEDQLKQL 132
>U49830-2|AAV58878.1| 324|Caenorhabditis elegans Hypothetical
protein C33F10.4b protein.
Length = 324
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 60 TPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGTC 119
T + +L ++ P V PQ+ + I + Q D + + S D I VK +C
Sbjct: 196 TSTIRLPNSLINLLSGSPDTVISVPQVFKSILNVPNVQEDHIVMCIPSTSSDNILVKASC 255
Query: 120 CK 121
K
Sbjct: 256 AK 257
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAA 30
P A+K P+PA++P PDAA
Sbjct: 31 PPPKSASKMTAPPAPASAPPAAPDAA 56
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 7.8
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 14 PQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTF 73
PQ P P P V D +T KR + N Y +Y A + ++ +
Sbjct: 1446 PQQPPPVQLPQVDVDPPKTAAKRKKGGGNPKKNASSYPAAGEYDAWI---EQMRMRFRLC 1502
Query: 74 EDIPSKVQQYPQMRRDIKSFL-ESQSDKSIR 103
DIP K Q+ P++ R F+ +D ++R
Sbjct: 1503 PDIPKK-QKEPRLNRPGCEFVSHGLTDMAVR 1532
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDN-MDLYRKQ 53
T TT+G++ IP A + SV A +P+ K ++DN YR Q
Sbjct: 8 TTTTTGSSAPSVIPPTAPTASVKTKAPTKGPVQPQKKPTTVDNGRRAYRNQ 58
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDN-MDLYRKQ 53
T TT+G++ IP A + SV A +P+ K ++DN YR Q
Sbjct: 8 TTTTTGSSAPSVIPPTAPTASVKTKAPTKGPVQPQKKPTTVDNGRRAYRNQ 58
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 7.8
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 14 PQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTF 73
PQ P P P V D +T KR + N Y +Y A + ++ +
Sbjct: 1446 PQQPPPVQLPQVDVDPPKTAAKRKKGGGNPKKNASSYPAAGEYDAWI---EQMRMRFRLC 1502
Query: 74 EDIPSKVQQYPQMRRDIKSFL-ESQSDKSIR 103
DIP K Q+ P++ R F+ +D ++R
Sbjct: 1503 PDIPKK-QKEPRLNRPGCEFVSHGLTDMAVR 1532
>Z77656-2|CAE17769.1| 724|Caenorhabditis elegans Hypothetical
protein F07B10.4 protein.
Length = 724
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 40 KRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKT 72
KR+ DN+DL++ + + +QL +++MKT
Sbjct: 344 KRKYFDNIDLFKFSCGFSGKNLVEQLSRDLMKT 376
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 81 QQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGT 118
+Q Q R+I++ ++ D + L HD+I +KGT
Sbjct: 549 EQMEQRLREIEAIVDGLDDLVTKDRTLLRHDIITLKGT 586
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 26.2 bits (55), Expect = 7.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 43 SLDNMDLYRKQQQYYAETPSDQL--LQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDK 100
SLD M+ + Q Y SDQ+ Q V T +D S + P + R ++ ++ +
Sbjct: 435 SLDAMEAHASSQDRYFTAESDQIKVAQGVSATMKDRGSCHKFIPYLIRGVQHGMQDIGVR 494
Query: 101 SIR 103
S+R
Sbjct: 495 SLR 497
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.129 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,312,012
Number of Sequences: 27539
Number of extensions: 132929
Number of successful extensions: 728
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 697
Number of HSP's gapped (non-prelim): 56
length of query: 133
length of database: 12,573,161
effective HSP length: 74
effective length of query: 59
effective length of database: 10,535,275
effective search space: 621581225
effective search space used: 621581225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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