GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002446-TA|BGIBMGA002446-PA|IPR003577|Ras small GTPase,
Ras type, IPR003579|Ras small GTPase, Rab type, IPR013753|Ras
         (232 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%)

Query: 53  RGC--LA-EHVRWGDAFAVVYSV 72
           RGC  LA  H+RW  AFA+  +V
Sbjct: 499 RGCYQLAINHIRWNSAFAIAPAV 521


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%)

Query: 53  RGC--LA-EHVRWGDAFAVVYSV 72
           RGC  LA  H+RW  AFA+  +V
Sbjct: 589 RGCYQLAINHIRWNSAFAIAPAV 611


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 44  ILDTSNCAIRGCLAEH 59
           ILDT+ C+++  L EH
Sbjct: 205 ILDTARCSMKWTLIEH 220


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,111
Number of Sequences: 429
Number of extensions: 1168
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 232
length of database: 140,377
effective HSP length: 56
effective length of query: 176
effective length of database: 116,353
effective search space: 20478128
effective search space used: 20478128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)