Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002445-TA|BGIBMGA002445-PA|IPR002466|Adenosine
deaminase/editase
(411 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00037-1|AAA50661.2| 495|Caenorhabditis elegans Adenosine deami... 65 7e-11
AF051275-1|AAC25097.1| 495|Caenorhabditis elegans putative RNA ... 65 7e-11
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 52 1e-06
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 52 1e-06
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 52 1e-06
Z79752-1|CAB02081.1| 323|Caenorhabditis elegans Hypothetical pr... 52 1e-06
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 51 2e-06
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 50 2e-06
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 47 3e-05
Z71267-6|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical ... 35 0.12
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 34 0.16
AL021492-7|CAE17999.1| 282|Caenorhabditis elegans Hypothetical ... 31 2.0
Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical p... 29 6.0
AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical... 29 6.0
>U00037-1|AAA50661.2| 495|Caenorhabditis elegans Adenosine
deaminase that acts onrna protein 2 protein.
Length = 495
Score = 65.3 bits (152), Expect = 7e-11
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 51 IEVLSLGTGSKCIGATKMSPLGDLLNDSHAEVFARRGFIHYLIQNIEK-ATNNLDSIFIK 109
+++++L TG+K + K+ G L D HAE+ ARRG + +L + K +T +SIF K
Sbjct: 163 LQIIALSTGNKGLRGDKIVNDGTALIDCHAEILARRGLLRFLYSEVLKFSTEPPNSIFTK 222
Query: 110 TDSKLKLKDSIEFIFYSSQLPCGDASIIPKNGEEIEEHFGDLIKVKRKTDESNCVHDTKR 169
+ L LK I F + + PCG A I K K S+ + ++ R
Sbjct: 223 GKNALVLKPGISFHLFINTAPCGVAR----------------IDKKLKPGTSDDLQNSSR 266
Query: 170 LKLSDIHRTGAKCLSNAEQDLKIPGKDYHVLGQVRTKPGRGDRTLSVSCSDKIARWVHLG 229
L+ I + L A + D ++G +R ++SCSDK+ R LG
Sbjct: 267 LRFK-IDKGMGTVLGGASEFEAPQTFDGIMMG---------ERMRTMSCSDKLLRANVLG 316
Query: 230 IHGALLDLICEPVY 243
+ GA+L +P+Y
Sbjct: 317 VQGAILSHFIDPIY 330
>AF051275-1|AAC25097.1| 495|Caenorhabditis elegans putative RNA
adenosine deaminase protein.
Length = 495
Score = 65.3 bits (152), Expect = 7e-11
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 51 IEVLSLGTGSKCIGATKMSPLGDLLNDSHAEVFARRGFIHYLIQNIEK-ATNNLDSIFIK 109
+++++L TG+K + K+ G L D HAE+ ARRG + +L + K +T +SIF K
Sbjct: 163 LQIIALSTGNKGLRGDKIVNDGTALIDCHAEILARRGLLRFLYSEVLKFSTEPPNSIFTK 222
Query: 110 TDSKLKLKDSIEFIFYSSQLPCGDASIIPKNGEEIEEHFGDLIKVKRKTDESNCVHDTKR 169
+ L LK I F + + PCG A I K K S+ + ++ R
Sbjct: 223 GKNALVLKPGISFHLFINTAPCGVAR----------------IDKKLKPGTSDDLQNSSR 266
Query: 170 LKLSDIHRTGAKCLSNAEQDLKIPGKDYHVLGQVRTKPGRGDRTLSVSCSDKIARWVHLG 229
L+ I + L A + D ++G +R ++SCSDK+ R LG
Sbjct: 267 LRFK-IDKGMGTVLGGASEFEAPQTFDGIMMG---------ERMRTMSCSDKLLRANVLG 316
Query: 230 IHGALLDLICEPVY 243
+ GA+L +P+Y
Sbjct: 317 VQGAILSHFIDPIY 330
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 51.6 bits (118), Expect = 1e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W LGI GALL + P++I + FG+ P +ESL+ A+ R
Sbjct: 715 KSLRVHCTADKLFKWNTLGIQGALLSNVLHPIFIDNIFFGSEAPVSDESLSYALQGRLGP 774
Query: 271 FNNTR 275
N R
Sbjct: 775 NENER 779
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 51.6 bits (118), Expect = 1e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W LGI GALL + P++I + FG+ P +ESL+ A+ R
Sbjct: 715 KSLRVHCTADKLFKWNTLGIQGALLSNVLHPIFIDNIFFGSEAPVSDESLSYALQGRLGP 774
Query: 271 FNNTR 275
N R
Sbjct: 775 NENER 779
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 51.6 bits (118), Expect = 1e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W LGI GALL + P++I + FG+ P +ESL+ A+ R
Sbjct: 786 KSLRVHCTADKLFKWNTLGIQGALLSNVLHPIFIDNIFFGSEAPVSDESLSYALQGRLGP 845
Query: 271 FNNTR 275
N R
Sbjct: 846 NENER 850
>Z79752-1|CAB02081.1| 323|Caenorhabditis elegans Hypothetical
protein D2005.1 protein.
Length = 323
Score = 51.6 bits (118), Expect = 1e-06
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W LGI GALL + P++I + FG+ P +ESL+ A+ R
Sbjct: 145 KSLRVHCTADKLFKWNTLGIQGALLSNVLHPIFIDNIFFGSEAPVSDESLSYALQGRLGP 204
Query: 271 FNNTR 275
N R
Sbjct: 205 NENER 209
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 50.8 bits (116), Expect = 2e-06
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W +GI GALL + P++I + FG+ P +ESL+ A+ R
Sbjct: 786 KSLRVHCTADKLFKWNTMGIQGALLSNVLHPIFIDNIFFGSEAPVSDESLSYALQGRLGP 845
Query: 271 FNNTR 275
N R
Sbjct: 846 NENER 850
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W LGI GALL + P++I + FG+ P +E+L+ A+ R
Sbjct: 715 KSLRVHCTADKLFKWNTLGIQGALLSNVLHPIFIDNIFFGSEAPVSDETLSYALQGRLGP 774
Query: 271 FNNTR 275
N R
Sbjct: 775 NENER 779
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 212 RTLSVSCS-DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVPYCEESLNRAILKRSNE 270
++L V C+ DK+ +W LGI GA L + P++I + FG+ P +E L+ A+ R
Sbjct: 715 KSLRVHCTADKLFKWNTLGIQGAPLSNVLHPIFIDNIFFGSEAPVSDEPLSYALQGRLGP 774
Query: 271 FNNTR 275
N R
Sbjct: 775 NENER 779
>Z71267-6|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical
protein W01A8.7 protein.
Length = 266
Score = 38.3 bits (85), Expect = 0.010
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 DKIARWVHLGIHGALLDLICEPVYIKHFIFGASVP 254
+K+ RW+ LG+ GALL I P++I I G + P
Sbjct: 136 NKLRRWIMLGVQGALLSNILAPIHISKIIIGTTPP 170
Score = 35.1 bits (77), Expect = 0.092
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 85 RRGFIHYLIQNIEKATNNLDSI--FIKTDSKLKLKDSIEFIFYSS 127
R+GFI +LI+ I+K N S+ I D++L++K S + YS+
Sbjct: 83 RKGFIRFLIKEIKKTENTNTSLLFMINDDAELEMKPSCQIYLYST 127
>AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical
protein R02D3.4 protein.
Length = 782
Score = 34.7 bits (76), Expect = 0.12
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Query: 247 FIFGASVPYCEESLNRAILKRSNEFNNTRAPKFYQSFITFSDIKSEGKYRPAPGSIVWIN 306
FIF V E L I K + N+ K Q +T +K+E +Y +P S + I+
Sbjct: 505 FIFNEKVTPKLEPLISLITKTTLSENDV--DKCKQCIVTLYQMKNERQYVISPESDIKIS 562
Query: 307 LTNPILEVAVQGRKLGLTKKGKSISPDASLIISKYNIYKIFLKLLNRNKELKVSIFGDES 366
+ + Q R + + K I + IYK ++ LN +K L+V + DE+
Sbjct: 563 SVRNLKDPDEQLR-VTFVELAKHIMKYVTFSEKHKEIYKTYMTTLNVDKLLEVDLDDDEA 621
Query: 367 IENI 370
++ +
Sbjct: 622 VDKM 625
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 34.3 bits (75), Expect = 0.16
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 31 ADDEWTVLSCIVKYETEHDTIEVLSLGTGSKCIGATKMSPLGDLLNDSHAEVFARRGFIH 90
AD W LS V E D +LS TG G+ K+S + ++L HA A+ +++
Sbjct: 141 ADKSW--LSAQVDIE-HRDLFSLLSQKTGWHVTGS-KISDVFNVLYRKHANGVAQPDWVN 196
Query: 91 YLIQNIEKATNNLDSIFIKTDSKLKLK 117
+++ N+ + SI +D K K++
Sbjct: 197 HVLANVTELKRQYRSIQFNSDEKSKMR 223
>AL021492-7|CAE17999.1| 282|Caenorhabditis elegans Hypothetical
protein Y45F10D.14 protein.
Length = 282
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 368 ENIPYNKMKIKSKQYRDRWENLKENFFRIWTVK 400
E YNK KI+ K+ ++R E K+ R++ +K
Sbjct: 156 EKYKYNKQKIREKEEKERKEKQKQGRIRVFKIK 188
>Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 336 LIISKY-NIYKIFLKLLNRNKELKVSIFGDESIENIPYNKMKIKSKQYRDRWENLK 390
+I+ +Y NI++I+L +L + + K S+ + S + + + + + ++W NL+
Sbjct: 307 IIVKEYTNIFRIYLSILVKQNKRKRSVSQESSNKTVVSKSKRKELAEEVEKWMNLR 362
>AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 336 LIISKY-NIYKIFLKLLNRNKELKVSIFGDESIENIPYNKMKIKSKQYRDRWENLK 390
+I+ +Y NI++I+L +L + + K S+ + S + + + + + ++W NL+
Sbjct: 307 IIVKEYTNIFRIYLSILVKQNKRKRSVSQESSNKTVVSKSKRKELAEEVEKWMNLR 362
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,283
Number of Sequences: 27539
Number of extensions: 483632
Number of successful extensions: 1161
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1144
Number of HSP's gapped (non-prelim): 18
length of query: 411
length of database: 12,573,161
effective HSP length: 83
effective length of query: 328
effective length of database: 10,287,424
effective search space: 3374275072
effective search space used: 3374275072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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