GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002444-TA|BGIBMGA002444-PA|IPR001958|Tetracycline
resistance protein, IPR011701|Major facilitator superfamily MFS_1,
IPR007114|Major facilitator superfamily
         (398 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   5.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   8.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 11/78 (14%)

Query: 226  FAMGVYYSNYALYLK-----TTYDLSPK---YVGY---VISFQGVMGSISSYFIGYINSF 274
            F +  Y++N+A Y K        D+ P    ++ Y   V+ F+ ++      +  + N F
Sbjct: 1398 FKIVCYFTNWAWYRKGLGKYLPEDIDPDLCTHIVYGFAVLDFENLIVKAHDSWADFDNQF 1457

Query: 275  YKKDVDYSLRSLHVFLLL 292
            YK+   Y  + + V L L
Sbjct: 1458 YKRVTGYKAKGIKVSLAL 1475



 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 272  NSFYKKDVDYSLRSLHVFLLL 292
            N FYKK V Y  R + V + L
Sbjct: 2378 NEFYKKVVSYKSRGVKVLIAL 2398


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 253 VISFQGVMGSISSYFIGYIN-SFYKKDVD 280
           V+S  G  G   ++ + YIN + +KK V+
Sbjct: 367 VVSLSGTFGFFGTHILSYINKASFKKIVN 395


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 369 GVSYVIYASLAPTVLGLVMSYHYRTKRK 396
           G+  +I A L  T++  V   +YR K+K
Sbjct: 380 GILVLIIAPLIATLIATVTVNYYRHKQK 407


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 112 KQAEIYGKMAAISGVGITLGPMIGGHIMEDNP 143
           K  +I  K+A I G+     P++ G  + D P
Sbjct: 256 KLLQISEKVANIWGLKKVYAPVVDGEFLTDEP 287


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.142    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,802
Number of Sequences: 317
Number of extensions: 3446
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 5
length of query: 398
length of database: 114,650
effective HSP length: 58
effective length of query: 340
effective length of database: 96,264
effective search space: 32729760
effective search space used: 32729760
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)