Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002444-TA|BGIBMGA002444-PA|IPR001958|Tetracycline
resistance protein, IPR011701|Major facilitator superfamily MFS_1,
IPR007114|Major facilitator superfamily
(398 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 31 0.29
SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|c... 31 0.29
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 31 0.29
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 31 0.38
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch... 29 1.2
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 29 1.5
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 27 3.5
SPBC691.05c ||SPBP22H7.01c|membrane transporter |Schizosaccharom... 27 3.5
SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|... 27 4.6
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 27 6.1
SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma... 26 8.1
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 31.1 bits (67), Expect = 0.29
Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 4/185 (2%)
Query: 208 SINWSKYWDIFLYKALVGFAMGVYYSNYALYLKTTYDLSPKY-VGYVISFQGVMGSISSY 266
++NW+ +W ++ +A ++ + L+ KY +G S V + Y
Sbjct: 129 ALNWT-FWRKMKTTSIYAYASLTIAWGSSVLSPASATLAKKYHIGMTTSLLNVSLFMLGY 187
Query: 267 FIGYINSFYKKDVDYSLRSLHVFLLL-SISLTGLIVSINVYNYVIWLIPLAMGNAVSRLV 325
+G I ++ L++ L L S+ + + ++ +I G V V
Sbjct: 188 CLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICRFFGGYGACVPLCV 247
Query: 326 TLEMVLKRSDGDHRGTLIGASNSVRSLSGVVAPMVAGF-TGQFLGVSYVIYASLAPTVLG 384
+RGT I +V + +VAP+V GF T +LG + Y + L
Sbjct: 248 VAAAFADMYPNRYRGTAITIFAAVIFVGPLVAPIVGGFLTKSYLGWRWTEYITSFMGFLS 307
Query: 385 LVMSY 389
+++ Y
Sbjct: 308 IILIY 312
>SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|chr
2|||Manual
Length = 812
Score = 31.1 bits (67), Expect = 0.29
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Query: 192 VLSLFNSFKQSFVVLYSINWSKYWDIF--LYKALVGFAMGVYYSNYALYLKTTYDLSPKY 249
VL + N F+ VVL+ + +S W F L+ +G G+Y L KY
Sbjct: 344 VLHMLNPFRTGQVVLFEVRYSGSWHFFELLFFCFLGIFGGLYGEFVMRLFFLIQKLRKKY 403
Query: 250 VGYVISFQGVMGSISSYFIGYINSFYKKDVDYSLRSL 286
+ ++ + + ++N + + D+ + L
Sbjct: 404 LSRWGVLDAAFVTVITSLVSFLNPWLRLDMTLGMELL 440
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 31.1 bits (67), Expect = 0.29
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 196 FNSFKQSFVVLYSINWSKYWDIFLYKALVGFAMGVYYSNYALYLKTTYDLSP--KYVGYV 253
F SF S VL+S S Y + + ++G G + LYL T Y + + Y+
Sbjct: 131 FISFAWSMTVLFSGFMSSYGGLIATRLILGLLEGCLFPALNLYLTTHYTRKEQCQRLSYL 190
Query: 254 ISFQGVMGSISSYF 267
+ G+ G+ F
Sbjct: 191 FASAGLAGAFGGLF 204
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 202 SFVVLYSINWSKYWDIFLYKALVGFAMGVYYSNYALYLKTTYDLSPKYVGYVISFQGVMG 261
S V +++ YW + L + L+G G ++ +LY+ TY + G +++ V
Sbjct: 120 SLVTIFTCFVRHYWSLVLTRLLLGICEGGFFPCLSLYISMTYKREEQ--GKRLAYLYVCS 177
Query: 262 SISSYFIGYI 271
S F G I
Sbjct: 178 CFSGAFGGLI 187
Score = 29.9 bits (64), Expect = 0.66
Identities = 13/59 (22%), Positives = 31/59 (52%)
Query: 339 RGTLIGASNSVRSLSGVVAPMVAGFTGQFLGVSYVIYASLAPTVLGLVMSYHYRTKRKV 397
R T +G + ++ +L+GV+A V + LG + + ++ T+ M ++ + + K+
Sbjct: 396 RATALGCNQTIGNLAGVIAGQVYRSSPYKLGHGFALGCTVVGTLTATAMRFYLQRQNKI 454
>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 29.1 bits (62), Expect = 1.2
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 221 KALVGFAMGVYYSNYALYLKTTYDLSPKY--VGYVISFQGVMGSISSYFIGYINSFYKKD 278
+ L+G V + L++ Y ++ + +++++ G+ G I + Y YK++
Sbjct: 147 RTLLGILESVITPAFVLFIAQWYRKEEQFFRMAFLVAWNGLGGLIGGS-MSY--GLYKRE 203
Query: 279 VDYSLRSLHVFLLLSISLTGLIVSINVYNYVIWLIPLAMGNA-VSRLVTLEMVLKRSDGD 337
++ +L ++ + +L I +TGLI IN ++ IP A ++VLKR D D
Sbjct: 204 LENNL-TMSPWRILFI-ITGLITIINGV-FIFIHIPDEPSKAWFLSEKEKDLVLKRLDTD 260
Query: 338 HRG 340
H G
Sbjct: 261 HAG 263
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 228 MGVYYSNYALYLKTTYDLSPKYVGYVISFQGVMGSISSYFIGYINSFYKKDVDYSLRSLH 287
MG +YA LK + + + SF+ ++G ++YF GY ++ + + L LH
Sbjct: 325 MGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLH 384
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 332 KRSDGDHRGTLIGASNSVRSLSGVVAPMVAGFTGQFLGVSYVIYASLAPTVLGLVMS 388
++ D +HR + G ++ +G P+VA T +F ++ AS G V++
Sbjct: 143 RKKDNEHRDEMEGLEKVMKQRAGNTGPLVANSTEEFEAWKRMMKASSGEAGAGNVIT 199
>SPBC691.05c ||SPBP22H7.01c|membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 668
Score = 27.5 bits (58), Expect = 3.5
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 207 YSINWSKYWDIFLY--KALVGFAMGVYYSNYALYLKTTYDLSPKYVGYVISFQGVMG 261
+ I WSKYW L K + Y S ALY D V +V+SF G++G
Sbjct: 148 FDIKWSKYWYQLLLGNKKQLDSINAEYGSQVALYFAFA-DFFKTGV-FVLSFWGILG 202
>SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 27.1 bits (57), Expect = 4.6
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 98 LAKALVPDYENNEQKQAEIYGKMAAISGVGITLGPMIGGHIMEDNPNGAFMFIAFIVGIC 157
L K L+P+Y++ E+ +Y A +S T DN + + +
Sbjct: 26 LEKGLLPEYDSKEEGALPLYSDHARLSNSPNTHRENNPSR-STDNSSPLLIKLLISFTSI 84
Query: 158 FIFNAALVCFL 168
+FNA VC+L
Sbjct: 85 ILFNAPAVCYL 95
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/51 (17%), Positives = 24/51 (47%)
Query: 337 DHRGTLIGASNSVRSLSGVVAPMVAGFTGQFLGVSYVIYASLAPTVLGLVM 387
D+ + G N+ ++ ++ ++ GF G F G +V + ++ ++
Sbjct: 79 DYPSGIRGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATIL 129
>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 255 SFQGVMGSISSYFIGYINSFYKKDVDYSLRSLHVFLLLSISLTGLIVSINVYNYVIWLIP 314
S + + SI Y+ Y Y+ + + LL IS+ I N ++W+ P
Sbjct: 138 SLETTLTSIGFYYFSYYLK-YENSSPEQRKKAYSSLLGFISVAAFACFIRPTNILVWIFP 196
Query: 315 LAMGN 319
L N
Sbjct: 197 LLFWN 201
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.142 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,588,548
Number of Sequences: 5004
Number of extensions: 61887
Number of successful extensions: 199
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 187
Number of HSP's gapped (non-prelim): 17
length of query: 398
length of database: 2,362,478
effective HSP length: 74
effective length of query: 324
effective length of database: 1,992,182
effective search space: 645466968
effective search space used: 645466968
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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