Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002441-TA|BGIBMGA002441-PA|undefined
(90 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M94132-1|AAA59164.1| 984|Homo sapiens MUC2 protein. 33 0.18
M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 33 0.18
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 33 0.18
AF257166-1|AAG18515.1| 147|Homo sapiens intestinal mucin 2 prot... 33 0.18
AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens ... 30 1.3
X56677-1|CAA40000.1| 319|Homo sapiens MyoD protein. 29 1.7
X17650-1|CAA35640.1| 267|Homo sapiens Myf-3 protein C-terminal ... 29 1.7
BT007157-1|AAP35821.1| 320|Homo sapiens myogenic factor 3 protein. 29 1.7
BC064493-1|AAH64493.1| 320|Homo sapiens myogenic differentiatio... 29 1.7
AF027148-1|AAC29001.1| 320|Homo sapiens myogenic determining fa... 29 1.7
AK126066-1|BAC86423.1| 533|Homo sapiens protein ( Homo sapiens ... 28 4.0
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 28 4.0
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 28 4.0
D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein. 27 9.2
BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein. 27 9.2
BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein. 27 9.2
AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein. 27 9.2
AJ488947-1|CAD35759.1| 855|Homo sapiens polyserase-IB protein p... 27 9.2
AJ488946-1|CAD35758.1| 1059|Homo sapiens polyserase-IA protein p... 27 9.2
AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein. 27 9.2
AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein. 27 9.2
>M94132-1|AAA59164.1| 984|Homo sapiens MUC2 protein.
Length = 984
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 4 ARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGD 63
A L+ S+ P + P + + TE + + +TL P I +T A + T TSG
Sbjct: 12 AELTTSNPPPESSTPQTSRSTSSPL-TESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGG 70
Query: 64 VTGSSGLRPPVLTAVSPPPLRRRMT 88
T L PP T SPP R T
Sbjct: 71 HT----LSPPPSTTTSPPGTPTRGT 91
>M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 41. ).
Length = 278
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 4 ARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGD 63
A L+ S+ P + P + + TE + + +TL P I +T A + T TSG
Sbjct: 133 AELTTSNPPPESSTPQTSRSTSSPL-TESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGG 191
Query: 64 VTGSSGLRPPVLTAVSPPPLRRRMT 88
T L PP T SPP R T
Sbjct: 192 HT----LSPPPSTTTSPPGTPTRGT 212
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 4 ARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGD 63
A L+ S+ P + P + + TE + + +TL P I +T A + T TSG
Sbjct: 4207 AELTTSNPPPESSTPQTSRSTSSPL-TESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGG 4265
Query: 64 VTGSSGLRPPVLTAVSPPPLRRRMT 88
T L PP T SPP R T
Sbjct: 4266 HT----LSPPPSTTTSPPGTPTRGT 4286
>AF257166-1|AAG18515.1| 147|Homo sapiens intestinal mucin 2
protein.
Length = 147
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 4 ARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGD 63
A L+ S+ P + P + + TE + + +TL P I +T A + T TSG
Sbjct: 1 AELTTSNPPPESSTPQTSRSTSSPL-TESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGG 59
Query: 64 VTGSSGLRPPVLTAVSPPPLRRRMT 88
T L PP T SPP R T
Sbjct: 60 HT----LSPPPSTTTSPPGTPTRGT 80
>AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ42981 fis, clone BRTHA2007422. ).
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 29 DTEISRIATTLQPDIPITVEAREADDTYEAETSGDVTGS--SGLRPPVLTAVSPPP 82
DTE++R+ P + R ++ + + G + S SGL P + A+SPPP
Sbjct: 97 DTELARVRVARPAATPESTLQRGSEPVFRVQGRGGLALSPASGLCPRLRPALSPPP 152
>X56677-1|CAA40000.1| 319|Homo sapiens MyoD protein.
Length = 319
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 21 VEQLINKVDTEISRIATTLQPDIPITVEAR--EADDTYEAETSGDVTGSSGLRPPVLTAV 78
+ ++ ++ TE L D+P R EA E E+SGD T S P
Sbjct: 251 LSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGA 310
Query: 79 SPPPL 83
+P P+
Sbjct: 311 NPNPI 315
>X17650-1|CAA35640.1| 267|Homo sapiens Myf-3 protein C-terminal
fragment (267 AA) protein.
Length = 267
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 21 VEQLINKVDTEISRIATTLQPDIPITVEAR--EADDTYEAETSGDVTGSSGLRPPVLTAV 78
+ ++ ++ TE L D+P R EA E E+SGD T S P
Sbjct: 199 LSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGA 258
Query: 79 SPPPL 83
+P P+
Sbjct: 259 NPNPI 263
>BT007157-1|AAP35821.1| 320|Homo sapiens myogenic factor 3 protein.
Length = 320
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 21 VEQLINKVDTEISRIATTLQPDIPITVEAR--EADDTYEAETSGDVTGSSGLRPPVLTAV 78
+ ++ ++ TE L D+P R EA E E+SGD T S P
Sbjct: 252 LSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGA 311
Query: 79 SPPPL 83
+P P+
Sbjct: 312 NPNPI 316
>BC064493-1|AAH64493.1| 320|Homo sapiens myogenic differentiation 1
protein.
Length = 320
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 21 VEQLINKVDTEISRIATTLQPDIPITVEAR--EADDTYEAETSGDVTGSSGLRPPVLTAV 78
+ ++ ++ TE L D+P R EA E E+SGD T S P
Sbjct: 252 LSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGA 311
Query: 79 SPPPL 83
+P P+
Sbjct: 312 NPNPI 316
>AF027148-1|AAC29001.1| 320|Homo sapiens myogenic determining
factor 3 protein.
Length = 320
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 21 VEQLINKVDTEISRIATTLQPDIPITVEAR--EADDTYEAETSGDVTGSSGLRPPVLTAV 78
+ ++ ++ TE L D+P R EA E E+SGD T S P
Sbjct: 252 LSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGA 311
Query: 79 SPPPL 83
+P P+
Sbjct: 312 NPNPI 316
>AK126066-1|BAC86423.1| 533|Homo sapiens protein ( Homo sapiens
cDNA FLJ44078 fis, clone TESTI4039038. ).
Length = 533
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 7 SPSHSAPTTRWPVAVEQLINKVDTEISRIAT--TLQPDIPITVEARE 51
S S AP+ WPVA LI K +SR T L PI V+A E
Sbjct: 305 SRSQIAPSILWPVASVWLITKTGMILSRAITQGCLAIGHPIRVKAAE 351
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 4 ARLSPSH-SAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSG 62
A +PS S P T PV+ + + + +S + + + EA + T E +
Sbjct: 443 ATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMP 502
Query: 63 DVTGSSGLRPPVLTAVSPPPL 83
T S G P +VS P+
Sbjct: 503 TSTPSEGSTPLTSMSVSTMPV 523
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 11 SAPTTRWPVAVEQLINKVDTEISRIATT-LQPDIPI--TVEAREADDTYEAETSGDVTGS 67
S P TR P++V L+ V +E S ++TT +IP+ + EA + T E + T +
Sbjct: 274 STPLTRMPLSV-MLV--VSSEASTLSTTPAATNIPVITSTEASSSPTTAEGTSIPTSTYT 330
Query: 68 SGLRPPVLTAVSPPPL 83
G P T S P+
Sbjct: 331 EGSTPLTSTPASTMPV 346
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 4 ARLSPSH-SAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSG 62
A +PS S P T PV+ + + + +S + + + EA + T E +
Sbjct: 443 ATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMP 502
Query: 63 DVTGSSGLRPPVLTAVSPPPL 83
T S G P +VS P+
Sbjct: 503 TSTPSEGSTPLTSMSVSTMPV 523
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 11 SAPTTRWPVAVEQLINKVDTEISRIATT-LQPDIPI--TVEAREADDTYEAETSGDVTGS 67
S P TR P++V L+ V +E S ++TT +IP+ + EA + T E + T +
Sbjct: 274 STPLTRMPLSV-MLV--VSSEASTLSTTPAATNIPVITSTEASSSPTTAEGTSIPTSTYT 330
Query: 68 SGLRPPVLTAVSPPPL 83
G P T S P+
Sbjct: 331 EGSTPLTSTPASTMPV 346
>D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.
Length = 1630
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 39 LQPDIPITVEAREADDTYEAETSGDVTGSSGLRPPVLTAVSPPPLRRR 86
++P+ +T+ +D Y GLR P+L SP PLR+R
Sbjct: 817 VEPENAVTITPLRPEDDYSPRERR----GGGLRLPLLPPESPGPLRQR 860
>BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein.
Length = 682
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 39 LQPDIPITVEAREADDTYEAETSGDVTGSSGLRPPVLTAVSPPPLRRR 86
++P+ +T+ +D Y GLR P+L SP PLR+R
Sbjct: 113 VEPENAVTITPLRPEDDYSPRERR----GGGLRLPLLPPESPGPLRQR 156
>BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein.
Length = 832
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 39 LQPDIPITVEAREADDTYEAETSGDVTGSSGLRPPVLTAVSPPPLRRR 86
++P+ +T+ +D Y GLR P+L SP PLR+R
Sbjct: 19 VEPENAVTITPLRPEDDYSPRERR----GGGLRLPLLPPESPGPLRQR 62
>AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.
Length = 1630
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 39 LQPDIPITVEAREADDTYEAETSGDVTGSSGLRPPVLTAVSPPPLRRR 86
++P+ +T+ +D Y GLR P+L SP PLR+R
Sbjct: 817 VEPENAVTITPLRPEDDYSPRERR----GGGLRLPLLPPESPGPLRQR 860
>AJ488947-1|CAD35759.1| 855|Homo sapiens polyserase-IB protein
protein.
Length = 855
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 6 LSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVT 65
++P+ +AP+T WP + E + T+ + +T+ D + +E E V
Sbjct: 446 MAPAPAAPSTAWPTSPESPVVSTPTKSMQALSTVPLDWVTVPKLQECGARPAMEKPTRVV 505
Query: 66 GSSG 69
G G
Sbjct: 506 GGFG 509
>AJ488946-1|CAD35758.1| 1059|Homo sapiens polyserase-IA protein
protein.
Length = 1059
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 6 LSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPITVEAREADDTYEAETSGDVT 65
++P+ +AP+T WP + E + T+ + +T+ D + +E E V
Sbjct: 446 MAPAPAAPSTAWPTSPESPVVSTPTKSMQALSTVPLDWVTVPKLQECGARPAMEKPTRVV 505
Query: 66 GSSG 69
G G
Sbjct: 506 GGFG 509
>AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.
Length = 1601
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 39 LQPDIPITVEAREADDTYEAETSGDVTGSSGLRPPVLTAVSPPPLRRR 86
++P+ +T+ +D Y GLR P+L SP PLR+R
Sbjct: 788 VEPENAVTITPLRPEDDYSPRERR----GGGLRLPLLPPESPGPLRQR 831
>AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.
Length = 1630
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 39 LQPDIPITVEAREADDTYEAETSGDVTGSSGLRPPVLTAVSPPPLRRR 86
++P+ +T+ +D Y GLR P+L SP PLR+R
Sbjct: 817 VEPENAVTITPLRPEDDYSPRERR----GGGLRLPLLPPESPGPLRQR 860
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.127 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,388,925
Number of Sequences: 224733
Number of extensions: 469159
Number of successful extensions: 986
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 953
Number of HSP's gapped (non-prelim): 50
length of query: 90
length of database: 73,234,838
effective HSP length: 68
effective length of query: 22
effective length of database: 57,952,994
effective search space: 1274965868
effective search space used: 1274965868
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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