GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002441-TA|BGIBMGA002441-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.34 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 0.34
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 28  VDTEISRIATTLQPDIPITVEAREADDT 55
           V+  + R+ T   PD+PI ++ ++   T
Sbjct: 768 VEAILKRVQTPFDPDVPIELQIQKQSHT 795


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 76  TAVSPPPLRRR 86
           T VSPPP +RR
Sbjct: 900 TVVSPPPTKRR 910


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 76  TAVSPPPLRRR 86
           T VSPPP +RR
Sbjct: 938 TVVSPPPTKRR 948


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.127    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,409
Number of Sequences: 429
Number of extensions: 980
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.6 bits)
S2: 37 (19.0 bits)