GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002440-TA|BGIBMGA002440-PA|IPR001283|Allergen V5/Tpx-1
related
         (456 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    27   0.21 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   2.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.5  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 153 RNQALHFNNATSSTKRIISGPSTALGRDIDHNKPEYTMNFNPNISEDN 200
           +++ L+ NN  SST + I GP     + ++ + P  T + +P + + +
Sbjct: 84  KSRKLNNNNVVSSTNQEIRGPKRKTWK-VEEDSPSPTSSVSPEVKDSS 130


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 102 QKNRTIYRLVC----NFAPGGNSKDKPVYLSGMPCSRCPKGQLCDPD 144
           +K R + R+ C    N  P     D+PV+  G  C  CP G L D D
Sbjct: 72  KKRRIVARVQCRSIKNECPEPTC-DEPVHRPGRCCKTCP-GDLYDSD 116


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 223 FNYFSHLRNFTRQAVSEITTNSNTCKDSLAVDDFIEL 259
           F YF  + N   +  S +TT S    D L+ D F ++
Sbjct: 95  FAYFLEVSNNNFKTYSNVTTCSYYSLDDLSEDTFYDI 131


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 342 TYSVNGINPIRIQAELSEIKPNTE-FTGHFFY 372
           T  VN +NP  ++  L++ K NT+ F  HF +
Sbjct: 77  TGGVNLLNPEDVELVLTDTKQNTKSFIYHFLH 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 144  DYRALCGLNRNQALH-FNNATSSTKRIISGPSTALGRDIDHNKPEYT 189
            D++ LCG      L   N       +    P   LGRD D  KP+ T
Sbjct: 2169 DFKNLCGCEEYPLLRTINRVLRGYAK--PDPKCILGRDNDKTKPKPT 2213


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,987
Number of Sequences: 317
Number of extensions: 4977
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 456
length of database: 114,650
effective HSP length: 59
effective length of query: 397
effective length of database: 95,947
effective search space: 38090959
effective search space used: 38090959
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)