Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002440-TA|BGIBMGA002440-PA|IPR001283|Allergen V5/Tpx-1
related
(456 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC21E11.07 ||SPAC2C4.01|glycine cleavage T-protein|Schizosacch... 33 0.083
SPCC895.08c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.0
SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual 29 1.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 1.3
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 29 1.8
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 28 2.4
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 4.1
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 4.1
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 5.4
SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subun... 27 5.4
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 27 7.2
SPAC1D4.01 ||SPAC1F3.11|sequence orphan|Schizosaccharomyces pomb... 27 7.2
SPBC29A3.16 |||ribosome biogenesis protein Rrs1 |Schizosaccharom... 26 9.5
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 26 9.5
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 9.5
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch... 26 9.5
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 9.5
>SPAC21E11.07 ||SPAC2C4.01|glycine cleavage
T-protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 33.1 bits (72), Expect = 0.083
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 370 FFYPEDVDNGDEIENSTELYYDTTNLAVSDIVQEIEE 406
F YP+ +NG E E S ELY + +A SD ++ +++
Sbjct: 73 FIYPKVSNNGTENERSDELYVEIDKVAESDFLKHLKK 109
>SPCC895.08c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 490
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 352 RIQAELSEIKPNTEFTGHFFYPEDVDNGDEIENSTELYYDTTNLAVSDIVQE 403
++++ELS + P + + +FY ED D+GD ST +N++ D + +
Sbjct: 439 KLESELSHLPPYSPYRDSYFYLED-DDGDADTPSTASLDYFSNISPPDFLNK 489
>SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 656
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 365 EFTGHFFYPEDVDNGDEIENSTEL-YYDTTNLAVSDIVQEIEEIRKSTT 412
E HFF P +V DE+ + T++ ++ + L +SD +E ++ KST+
Sbjct: 553 ELVDHFFPPIEVSTRDEVSSFTDVNFWRSPLLELSD--EEEDDTNKSTS 599
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 212 IPDIEDEFNI---PFNYFSH--LRNFTRQAVSEITTNSNTCKDSLAVDDFIELLKKKLSE 266
+ D+EDE +I F Y + L+++ + ++ T++ T K + A ++E L K + +
Sbjct: 663 LEDLEDEKSIRSAEFCYIASKSLQSYANLWLKQLATSTKTSKAASAYGAYVEQLTKLMDK 722
Query: 267 DPMFKEIL 274
MF+ I+
Sbjct: 723 VSMFRSIV 730
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 165 STKRIISGPSTALGRDIDHNKPEYTM----NFNPNISEDNYKIKSQK 207
ST+R+ISG +L + KP Y M N +P +SE++ K Q+
Sbjct: 49 STQRLISGNPISLDVVPEWQKPSYYMLFISNIDPEVSENDIKYLFQR 95
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 180 DIDHNKPEYTMNFNPNISEDNYKIKSQKPVTYIPDIEDE 218
D +HN+PEY SE N K ++P+ ++ +E
Sbjct: 188 DSEHNEPEYHTESKNEESEHNTKSIREEPIHHVDSKNEE 226
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 170 ISGPSTALGRDIDHNKPEYTMNFNPNISEDNYKIKS---QKPVTYIPDIEDEFNIPF 223
++ P R +D T + N ++ Y + S QKPV +IP I+D F F
Sbjct: 975 LNDPYPVAARFLDAYPEASTQDLNTQDAQFFYSLCSNPFQKPVPFIPAIDDTFEFYF 1031
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 59 KFTPSSETGHSHYNYFTQLVW-ADSRQV-GCG 88
K+ PS++T SHY L W +D+R + CG
Sbjct: 234 KYLPSNQTNISHYGTVNGLAWTSDARYLASCG 265
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 139 QLCDPDYRALCGLNRNQALHFNNATSSTKRIISGPSTALGRDIDHNKPEYTMNFN 193
Q C+ D L N H +N T+S R+IS ++ L I + +P+YT ++
Sbjct: 29 QSCEQDLLTL----DNLVHHIHNGTTSNLRLISNINSILDH-IGNRRPKYTCEWD 78
>SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subunit
Rpc34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 5.4
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 317 TLLTDLVKAVIFRG-NSHVTEEVTESTYSVNGINPIRIQAELSEIKPNTEFTGHFFYPED 375
TL T+L +V+ R S ++ + +S SV NP R L ++ P+TE TG ++ +
Sbjct: 108 TLRTNLHVSVVDRCLKSLESKNLVKSIKSVK--NPTRKIYMLYDLVPSTELTGGPWFTDQ 165
Query: 376 VDNGDEIENSTELYY 390
+ + IEN ++ Y
Sbjct: 166 ELDVEFIENLKKVIY 180
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 372 YPEDVDNGDEIENSTELYYDTTNLAVSDIVQEIEEIRK-STTV 413
YP D+D EIE+S +++ ++ ++ + + +E+EE + TTV
Sbjct: 2050 YP-DIDIDFEIEDSEDVHANSPSVLIVQLTRELEEDEEVDTTV 2091
>SPAC1D4.01 ||SPAC1F3.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 249 DSLAVDDFIELLKKKLSEDPMFKEILTTRSPYNDGYTD 286
+ A D+FIE + K +S+D K I Y DG D
Sbjct: 248 EDAARDEFIEKMLKPISQDEESKGIYRRFRVYKDGTQD 285
>SPBC29A3.16 |||ribosome biogenesis protein Rrs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 381 EIENSTELYYDTTNLAVSDIVQEIEEIRKSTTVKDFLGEILDSDEVTEDAN 431
+IENS L +D N+A DI ++E + S + K+ L D V + N
Sbjct: 4 QIENSIPLDFDLGNMAAFDI-SPLDETKLSGSEKESFLFSLSRDNVQQLVN 53
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 9.5
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 178 GRDIDHNKPEYTMNFNPNISED-NYKIKSQKPVTYIPDIEDEFNIPFNYF--SHLRNFTR 234
G D ++ E + F ++ +D +I KPV +I + P Y + RN T
Sbjct: 540 GNARDMDRQEARVAFGSHVEDDVENEIIWYKPVPIKFEISKDEIHPRGYKCGGNERNLTP 599
Query: 235 QAVSEITTNSNTCKDSLAVDDFIEL 259
+A SEI N KD + ++L
Sbjct: 600 EATSEIEREKNESKDISTFNIILDL 624
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 382 IENSTELYYDTTNLAVSDIVQEIEEIRKSTT--VKDFLGEILDSDEVTEDANAFGVIMAN 439
+ +S + + + A+ D +E E+ TT +KDF +LD E A GV +
Sbjct: 137 VTSSYKKHREEVQKAIEDRKEEDEKSITDTTTGMKDFYASMLDRQEKIHQAAVEGVQNSK 196
Query: 440 ETPTE 444
+T E
Sbjct: 197 KTGAE 201
>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 815
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 216 EDEFNIPFNYFSHLRNFTRQAVSEITTNSNTCKDSLAVDDFIELLKKKLSEDPMFKEILT 275
ED F I N S + N+ QAVS + + + +++ ++ + L+ DP+ + +
Sbjct: 698 EDSF-IDINTLSSMLNYHTQAVSIHHPSFYISRSDVPLEEEFQIPNELLAVDPVAESMQE 756
Query: 276 TRSPYND--GYTDPSV 289
N+ G DP V
Sbjct: 757 NSDIINEAFGLVDPDV 772
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 157 LHFNNATSSTKRIISGPSTALGRDIDHNKPEYTMNFNPNISEDNYKIKSQKPVTYIP 213
+H N +++ T R +SG + + ++ T + P S D + +S + +P
Sbjct: 179 IHTNTSSNGTSRRVSGLGSFMAQNSSETSSNRTSAYLPGSSTDEQEKRSSVTLASMP 235
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,219,627
Number of Sequences: 5004
Number of extensions: 100383
Number of successful extensions: 288
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 282
Number of HSP's gapped (non-prelim): 18
length of query: 456
length of database: 2,362,478
effective HSP length: 75
effective length of query: 381
effective length of database: 1,987,178
effective search space: 757114818
effective search space used: 757114818
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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