Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002440-TA|BGIBMGA002440-PA|IPR001283|Allergen V5/Tpx-1
related
(456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0211 + 1568646-1568716,1568722-1569085 35 0.12
07_01_0207 + 1528951-1529499 35 0.16
07_01_0203 + 1469575-1470045 35 0.16
07_01_0199 - 1420982-1421452 35 0.16
07_01_0195 - 1387831-1388301 35 0.16
07_01_0191 - 1354678-1355148 35 0.16
07_01_0187 - 1321525-1321995 35 0.16
07_01_0206 + 1484107-1484583 34 0.27
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 34 0.27
01_04_0090 - 15940935-15941438 34 0.27
07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898 33 0.47
07_01_0205 + 1481380-1481892 33 0.63
04_03_0202 + 12637271-12637499,12638217-12638821 32 0.83
02_05_1005 - 33445738-33446274 32 1.1
07_01_0958 - 8041483-8042013 31 1.4
06_02_0304 + 14053190-14053717 31 1.9
07_01_0209 + 1544347-1544796 30 3.3
05_07_0345 - 29417029-29417769 30 3.3
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 30 4.4
02_05_1001 + 33423562-33424098 29 5.8
10_02_0159 + 6020441-6020971 29 7.7
07_01_0210 + 1555941-1556390 29 7.7
07_01_0208 + 1532691-1533209 29 7.7
>07_01_0211 + 1568646-1568716,1568722-1569085
Length = 144
Score = 35.1 bits (77), Expect = 0.12
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 69 SHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
S ++TQ+VW++S +GC V ++S G ++ + CN++P GN KP Y
Sbjct: 97 SSCGHYTQVVWSNSTAIGCARVV----CDNSHG-----VF-ITCNYSPPGNYNGKPPY 144
>07_01_0207 + 1528951-1529499
Length = 182
Score = 34.7 bits (76), Expect = 0.16
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 19/115 (16%)
Query: 17 SGSVSVGQNIATIHGDAPGLTPLS-----LVDVWYMELLHVNVSILGKFTPSSETGHSHY 71
+G+ + G+NI + G A G S V W E + G P+ E+
Sbjct: 82 NGTATYGENIYVVVGPAGGNDTSSSPAAAAVGAWAAEEQWYDPDTNGCSAPAGES----C 137
Query: 72 NYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
+++TQLVW + +GC V D+G ++ ++CN+ P GN D+ Y
Sbjct: 138 DHYTQLVWNATTAIGCAEVVCD---GDAG------VF-VICNYYPPGNIPDQSPY 182
>07_01_0203 + 1469575-1470045
Length = 156
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 FTPSSETGHSHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
+ +S G + ++TQ+VW D+ VGC AV NR ++ +C + P GN
Sbjct: 100 YASNSCVGGAMCGHYTQVVWRDTTAVGCAAVAC---------NANRGVF-FICTYFPAGN 149
Query: 120 SKDKPVY 126
+++ Y
Sbjct: 150 VQNQRPY 156
>07_01_0199 - 1420982-1421452
Length = 156
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 FTPSSETGHSHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
+ +S G + ++TQ+VW D+ VGC AV NR ++ +C + P GN
Sbjct: 100 YASNSCVGGAMCGHYTQVVWRDTTAVGCAAVAC---------NANRGVF-FICTYFPAGN 149
Query: 120 SKDKPVY 126
+++ Y
Sbjct: 150 VQNQRPY 156
>07_01_0195 - 1387831-1388301
Length = 156
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 FTPSSETGHSHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
+ +S G + ++TQ+VW D+ VGC AV NR ++ +C + P GN
Sbjct: 100 YASNSCVGGAMCGHYTQVVWRDTTAVGCAAVAC---------NANRGVF-FICTYFPAGN 149
Query: 120 SKDKPVY 126
+++ Y
Sbjct: 150 VQNQRPY 156
>07_01_0191 - 1354678-1355148
Length = 156
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 FTPSSETGHSHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
+ +S G + ++TQ+VW D+ VGC AV NR ++ +C + P GN
Sbjct: 100 YASNSCVGGAMCGHYTQVVWRDTTAVGCAAVAC---------NANRGVF-FICTYFPAGN 149
Query: 120 SKDKPVY 126
+++ Y
Sbjct: 150 VQNQRPY 156
>07_01_0187 - 1321525-1321995
Length = 156
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 FTPSSETGHSHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
+ +S G + ++TQ+VW D+ VGC AV NR ++ +C + P GN
Sbjct: 100 YASNSCVGGAMCGHYTQVVWRDTTAVGCAAVAC---------NANRGVF-FICTYFPAGN 149
Query: 120 SKDKPVY 126
+++ Y
Sbjct: 150 VQNQRPY 156
>07_01_0206 + 1484107-1484583
Length = 158
Score = 33.9 bits (74), Expect = 0.27
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 23 GQNIATIHGDAPGLTPLSLVDVWYMELLHVNVSILGKFTPSSETGHSHYNYFTQLVWADS 82
G+N+ +G TP + W E + + E G +HY TQ+VW +
Sbjct: 69 GENLWWSYGAGTTGTPADAMSYWLAEKAKYYYD--SNYCSAGELGCTHY---TQVVWRRT 123
Query: 83 RQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
VGC V ++ G TI + CN+ P GN K++ Y
Sbjct: 124 AYVGCARVAC-----NTNG--IGTI--IACNYFPRGNMKNERPY 158
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 33.9 bits (74), Expect = 0.27
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 74 FTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
+TQL+W +S +VGC +VT +DS G T + CN+ P GN
Sbjct: 272 YTQLMWTNSTRVGCASVT----CDDSAG--GGTF--IACNYDPPGN 309
Score = 29.5 bits (63), Expect = 5.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 73 YFTQLVWADSRQVGCGAV 90
++TQ+VWA + +VGC AV
Sbjct: 121 HYTQMVWAKTTKVGCAAV 138
>01_04_0090 - 15940935-15941438
Length = 167
Score = 33.9 bits (74), Expect = 0.27
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
Query: 73 YFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
++TQ+VW DS VGC V NR I+ ++CN+ P GN
Sbjct: 124 HYTQVVWRDSTNVGCARVRC---------DANRGIF-IICNYEPRGN 160
>07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898
Length = 301
Score = 33.1 bits (72), Expect = 0.47
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 73 YFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
++TQ+VW+ + Q+GC VT R+ + CN+ P GN K Y
Sbjct: 255 HYTQVVWSRTTQIGCARVT-------GCNINGRSSTLIACNYNPRGNINGKRPY 301
>07_01_0205 + 1481380-1481892
Length = 170
Score = 32.7 bits (71), Expect = 0.63
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 15/104 (14%)
Query: 23 GQNIATIHGDAPGLTPLSLVDVWYMELLHVNVSILGKFTPSSETGHSHYNYFTQLVWADS 82
G+N+ +G TP + W E + + S S+ G ++TQ+VW +
Sbjct: 82 GENLWWSYGAGTTGTPADAMSYWVGEKPYYDYS-------SNSCGGRECRHYTQVVWRRT 134
Query: 83 RQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
VGC V + N + CN+ PGGN ++ Y
Sbjct: 135 AYVGCARV--------ACNTNNGIGTIIACNYYPGGNIYNERPY 170
>04_03_0202 + 12637271-12637499,12638217-12638821
Length = 277
Score = 32.3 bits (70), Expect = 0.83
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 58 GKFTPSSETGHSHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPG 117
G +S S +TQ+VW ++ QVGCG + DSG LVC++ P
Sbjct: 220 GAAAAASSGSSSPCTRYTQVVWRNTTQVGCGRIVC-----DSGDS------LLVCDYFPP 268
Query: 118 GN 119
GN
Sbjct: 269 GN 270
>02_05_1005 - 33445738-33446274
Length = 178
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 17 SGSVSVGQNIATIHGDAPGLTPLSLVDVWYMELLHVNVSILGKFTPSSETGHSHYNYFTQ 76
+ S + G N+ +G P V W E H + E GH + Q
Sbjct: 87 AASAAGGVNVFRGYG-GEAWQPSDAVAAWAEEAQHYDYGA-NACAAGKECGH-----YKQ 139
Query: 77 LVWADSRQVGCGAVT 91
++W DS QVGC VT
Sbjct: 140 MMWRDSTQVGCATVT 154
>07_01_0958 - 8041483-8042013
Length = 176
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 73 YFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
++TQ+VW+ + Q+GC VT R+ + CN+ P GN + Y
Sbjct: 130 HYTQVVWSRTTQIGCARVT-------GCNINGRSSTLIACNYNPRGNINGERPY 176
>06_02_0304 + 14053190-14053717
Length = 175
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 73 YFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
++TQ+ WA + ++GC AVT DSG +VC++ P GN+ + Y
Sbjct: 122 HYTQVTWARTTRLGCAAVTC-----DSGAT------FVVCSYDPPGNTNGRGPY 164
>07_01_0209 + 1544347-1544796
Length = 149
Score = 30.3 bits (65), Expect = 3.3
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 23 GQNIATIHGDAPG-LTPLSLVDVWYMELLHVNVSILGKFTPSSETGHSHYNYFTQLVWAD 81
G+NI G A G T S V W E + G + S+ G S ++TQ+VW D
Sbjct: 61 GENI--FWGSAGGDWTAASAVSAWVSEKQWYDH---GSNSCSAPEGSS-CGHYTQVVWRD 114
Query: 82 SRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
S +GC V D G ++ + CN++P GN
Sbjct: 115 STAIGCARVVCD---GDLG------VF-ITCNYSPPGN 142
>05_07_0345 - 29417029-29417769
Length = 246
Score = 30.3 bits (65), Expect = 3.3
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 73 YFTQLVWADSRQVGCG 88
+FTQ+VW D++ VGCG
Sbjct: 203 HFTQIVWNDTKLVGCG 218
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 234 RQAVSEITTNSNTCKDSLAVDDFIELLKKKLSEDPMFKEILTTRSPY 280
R V E AV DF+ LL KKL +D + +E+ TR PY
Sbjct: 80 RLVVGEAAKEQAVGSPGRAVHDFMRLLGKKLGDDDVQREM--TRLPY 124
>02_05_1001 + 33423562-33424098
Length = 178
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 23 GQNIATIHGDAPGLTPLSLVDVWYMELLHVNVSILGKFTPSSETGHSHYNYFTQLVWADS 82
G+N+ HG G P +V W + + HY TQ+VW +
Sbjct: 90 GENL--FHGSGVGWAPADVVAAWVSRERALYDAASNSCRGGDAAACGHY---TQVVWRRT 144
Query: 83 RQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGN 119
VGC T +GG R Y VC++ P GN
Sbjct: 145 TAVGCALATC------AGG---RGTYG-VCSYNPPGN 171
>10_02_0159 + 6020441-6020971
Length = 176
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
Query: 73 YFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVYLS 128
++TQ+VW S ++GC V NR ++ + CN+ P GN + +L+
Sbjct: 125 HYTQVVWRKSVRIGCARVVC---------AANRGVF-ITCNYDPPGNFNGERPFLT 170
>07_01_0210 + 1555941-1556390
Length = 149
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 69 SHYNYFTQLVWADSRQVGCGAVTFKERYEDSGGQKNRTIYRLVCNFAPGGNSKDKPVY 126
S ++TQ+VW++S +GC V ++S G ++ + CN++P GN + Y
Sbjct: 102 SSCGHYTQVVWSNSTAIGCARVV----CDNSLG-----VF-ITCNYSPPGNVDGESPY 149
>07_01_0208 + 1532691-1533209
Length = 172
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 23 GQNIATIHGDAPG-LTPLSLVDVWYMELLHVNVSILGKFTPSSET-GHSHYNYFTQLVWA 80
G+N+ G A G T S V W E N + PS ++ GH +TQ+VW
Sbjct: 84 GENL--FWGSAGGNWTAASAVSAWVSEKQWYNHTSNSCSAPSGQSCGH-----YTQVVWR 136
Query: 81 DSRQVGCGAV 90
S +GC V
Sbjct: 137 SSTAIGCARV 146
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,102,349
Number of Sequences: 37544
Number of extensions: 558915
Number of successful extensions: 1243
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1229
Number of HSP's gapped (non-prelim): 24
length of query: 456
length of database: 14,793,348
effective HSP length: 84
effective length of query: 372
effective length of database: 11,639,652
effective search space: 4329950544
effective search space used: 4329950544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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