Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002439-TA|BGIBMGA002439-PA|IPR003750|Protein of unknown
function DUF171
(405 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.16c |||DUF171 family protein|Schizosaccharomyces pombe|c... 108 2e-24
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 29 0.89
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 28 2.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 4.7
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 27 4.7
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 27 6.3
SPAC26H5.09c |||GFO/IDH/MocA family oxidoreductase|Schizosacchar... 27 6.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 6.3
SPAC13F5.07c |||previusly annotated as dubious, may not be prote... 26 8.3
>SPBC8D2.16c |||DUF171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 315
Score = 108 bits (259), Expect = 2e-24
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Query: 65 TVSIAVPSSILENAQSAELRTYLAGQIARAACVFCVDEVIVYDDIGEKLNTKKSKLEDSD 124
T+S+A+P S L A + +L+T +I+R ++ +DE+I+ +D NT+ L
Sbjct: 17 TISLALPISSLNVAYNLQLKTSFVWKISRIVSLYGIDEIILLEDPEYVQNTQVHTLSSDA 76
Query: 125 GVKVARKSCVQLARILQYLECPQYLRKHFFPIHKDLQFAGL--LNPLDAPHHLRQTNDFK 182
+K K L +L Y E P ++RK FP++ L++ L PL +F
Sbjct: 77 YLKDPTKF---LTDLLCYFETPFFMRKELFPLNPHLKYTSCFPLLPLRNDKASTVNIEFP 133
Query: 183 FREGITMNKKVKPGKGSQVNVGLLQD--VSTDKLLNPGMRVTVRMLPALKNGK-KLKGKI 239
+REGI + + +N GL + VS+ +L P RVTVR+ N + +L+G I
Sbjct: 134 YREGIVTHPSPQAKNKYIINAGLSHNVIVSSPSVLAPRTRVTVRLKAQSPNEEGQLQGDI 193
Query: 240 VSLTTPRAETGVYWGYTVRIASTLSQVFTQCPYKDGYDVTI 280
VS + PR + G YWGY VR + SQ+ PYK GYD +
Sbjct: 194 VSFSAPREKGGHYWGYKVR-SCLSSQLCKSSPYKGGYDFVV 233
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 29.5 bits (63), Expect = 0.89
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 306 FGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSRTIRTEEAILI--ALSGLRNKL 363
F G+H IE A E+ +Q K+ + H+V +G I E IL ++ L K+
Sbjct: 129 FNGIHAIERAFEAAQQGKITHTGAMV-HWVIAAVDEGKPIIVQEVPILSTDSIEALEEKI 187
Query: 364 QA 365
A
Sbjct: 188 HA 189
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 293 PDKEVKYNHVLIVFGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSRTIRT 348
P+ + Y ++V + I +L + L + L H VN L GS+T++T
Sbjct: 773 PEVDSSYKPKVLVSQIWNSIIISLYREHLLAIEHVQRLIYHQVNSLDGDGSKTLKT 828
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 4.7
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 314 AALESDEQLKVNDASLLFNHYVNVLPSQGSRTIRTEEAILIALSGLRNKLQANNEPMVFK 373
AAL ++ K N + +N NVL + R +EA+L L LR +L + PM K
Sbjct: 362 AALRKEKSKKTNYSVGAYNEDRNVLSNMLDNERREKEALLQELESLRVQL-SKKVPMPAK 420
Query: 374 GS 375
+
Sbjct: 421 NT 422
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 4.7
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 274 DGYDVTIGTSDR--GLSIDTLPDKEVKYNHVL-IVFGGLHGIEAALESDEQLKVNDASLL 330
DG D T+ G I PD + H LHGIE A V A ++
Sbjct: 277 DGIDYTMEDLKEAVGADISIYPDPKRTLQHRWRYPTLSLHGIEGAFSGSGAKTVIPAKVI 336
Query: 331 FNHYVNVLPSQGSRTIR--TEEAILIALSGL--RNKLQANN 367
+ +P+ S T+ +E + + L +NKL NN
Sbjct: 337 GKFSIRTVPNMESETVERLVKEHVTKVFNSLNSKNKLAFNN 377
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 87 LAGQIARAACVFCVDEVIVYDDIGEKLNTKKSKL---EDSDGVKVARKSCVQLARILQYL 143
L +IA+ C+ V V +YD ++ S+ ED GV A+ + +LA + QY+
Sbjct: 48 LGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSSQYFLTEDDIGVPRAKVTVSKLAELNQYV 107
>SPAC26H5.09c |||GFO/IDH/MocA family
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 300 NHVLIVFGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQG 342
+ + +FG H + A LES Q+ + F ++ LP +G
Sbjct: 187 DQAITLFGTPHSVTAKLESQRQIPPLEVEDCFRIVLHYLPQEG 229
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.6 bits (56), Expect = 6.3
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 331 FNHYVN-VLPSQGSRTIRTEEAILIALSGLRNKLQANNEPMV-FKGSGIALSSAFPNFKP 388
FN + V PS + R ++ + A S + +K + +E +AL+ + P F P
Sbjct: 1289 FNSFSGTVRPSNSEKLQRPQQLSVAATSAVDSKTASISEEQAKIDKQKVALNPSAPEFVP 1348
Query: 389 DSDHSGA 395
DS S A
Sbjct: 1349 DSTPSDA 1355
>SPAC13F5.07c |||previusly annotated as dubious, may not be protein
coding|Schizosaccharomyces pombe|chr 1|||Manual
Length = 105
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 109 IGEKLNTKKSKLEDSDGVKVARKS 132
+GEK+N KL+ S KV RK+
Sbjct: 52 LGEKMNVNSQKLKTSSPPKVVRKN 75
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,663,278
Number of Sequences: 5004
Number of extensions: 65776
Number of successful extensions: 162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 154
Number of HSP's gapped (non-prelim): 9
length of query: 405
length of database: 2,362,478
effective HSP length: 74
effective length of query: 331
effective length of database: 1,992,182
effective search space: 659412242
effective search space used: 659412242
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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