GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002439-TA|BGIBMGA002439-PA|IPR003750|Protein of unknown
function DUF171
         (405 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-989|AAF58861.1|  485|Drosophila melanogaster CG12128-PA...   400   e-111
AY118466-1|AAM49835.1|  485|Drosophila melanogaster GM02932p pro...   399   e-111
AY113589-1|AAM29594.1|  250|Drosophila melanogaster RH40775p pro...   186   6e-47
AE013599-990|AAS64882.1|  250|Drosophila melanogaster CG12128-PB...   186   6e-47

>AE013599-989|AAF58861.1|  485|Drosophila melanogaster CG12128-PA,
           isoform A protein.
          Length = 485

 Score =  400 bits (986), Expect = e-111
 Identities = 199/359 (55%), Positives = 253/359 (70%), Gaps = 6/359 (1%)

Query: 10  PGKSWREINKERKSLXXXXXXXXXXXXXXXVALXXXXXXXXXXXXXXXXXXXXISTVSIA 69
           P KSW+++N+ERK+L                A                      ST+SIA
Sbjct: 19  PHKSWKKVNEERKALKRQRKQDKLLKELQQ-AKEAESQAGKAANEVQAKDKPNPSTLSIA 77

Query: 70  VPSSILENAQSAELRTYLAGQIARAACVFCVDEVIVYDDIG--EKLNTKKSKLEDSDGVK 127
           VP SILENAQS ELR Y+AGQIARAAC+F V+EVIV+DD+G      TK+S   D +G  
Sbjct: 78  VPGSILENAQSNELRAYVAGQIARAACIFRVNEVIVFDDVGIATARETKRSYEADGEGSS 137

Query: 128 VA--RKSCVQLARILQYLECPQYLRKHFFPIHKDLQFAGLLNPLDAPHHLRQTNDFKFRE 185
               R S +QLARILQYLECPQYLRK+FFP+HKDL+++GLLNPLD PHHLRQ + F++RE
Sbjct: 138 TGTVRSSSLQLARILQYLECPQYLRKYFFPLHKDLKYSGLLNPLDTPHHLRQQSKFRYRE 197

Query: 186 GITMNKKVKPGKGSQVNVGLLQDVSTDKLLNPGMRVTVRMLPALKNGKKLKGKIVSLTTP 245
           G+  +KK K G  S  NVGLL DV  DK + PG+RVTV+M P  ++ +K +G +VS   P
Sbjct: 198 GVICDKKAKEGH-SYANVGLLNDVLVDKAIEPGVRVTVKMEPQSESCRKQRGTLVSPDEP 256

Query: 246 RAETGVYWGYTVRIASTLSQVFTQCPYKDGYDVTIGTSDRGLSIDTLPDKEVKYNHVLIV 305
           R ETGVYWGY VRIA ++S++FT+ PY  GYDVT+GTSDRG ++  +P++   +NH+LIV
Sbjct: 257 RRETGVYWGYQVRIAHSMSEIFTKSPYATGYDVTVGTSDRGTNVHEVPNRSYNFNHMLIV 316

Query: 306 FGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSRTIRTEEAILIALSGLRNKLQ 364
           FGGL G+E+AL +DE+L V+D  LLF+HYVNVLP QGSRTIRTEEA+LIAL+ L+ KLQ
Sbjct: 317 FGGLQGLESALANDEKLTVDDPELLFDHYVNVLPRQGSRTIRTEEALLIALAALQEKLQ 375


>AY118466-1|AAM49835.1|  485|Drosophila melanogaster GM02932p
           protein.
          Length = 485

 Score =  399 bits (982), Expect = e-111
 Identities = 198/359 (55%), Positives = 252/359 (70%), Gaps = 6/359 (1%)

Query: 10  PGKSWREINKERKSLXXXXXXXXXXXXXXXVALXXXXXXXXXXXXXXXXXXXXISTVSIA 69
           P KSW+++N+ERK+L                A                      ST+SIA
Sbjct: 19  PHKSWKKVNEERKALKRQRKQDKLLKELQQ-AKEAESQAGKAANEVQAKDKPNPSTLSIA 77

Query: 70  VPSSILENAQSAELRTYLAGQIARAACVFCVDEVIVYDDIG--EKLNTKKSKLEDSDGVK 127
           VP SILENAQS ELR Y+AGQIARAAC+F V+EVIV+DD+G      TK+S   D +G  
Sbjct: 78  VPGSILENAQSNELRAYVAGQIARAACIFRVNEVIVFDDVGIATARETKRSYEADGEGSS 137

Query: 128 VA--RKSCVQLARILQYLECPQYLRKHFFPIHKDLQFAGLLNPLDAPHHLRQTNDFKFRE 185
               R S +QLARILQYLECPQYLRK+FFP+HKDL+++GLLNPLD PHHLRQ + F++RE
Sbjct: 138 TGTVRSSSLQLARILQYLECPQYLRKYFFPLHKDLKYSGLLNPLDTPHHLRQQSKFRYRE 197

Query: 186 GITMNKKVKPGKGSQVNVGLLQDVSTDKLLNPGMRVTVRMLPALKNGKKLKGKIVSLTTP 245
           G+  +KK K G  S  NVGLL DV  DK + PG+RVTV+M P  ++ +K +G +VS   P
Sbjct: 198 GVICDKKAKEGH-SYANVGLLNDVLVDKAIEPGVRVTVKMEPQSESCRKQRGTLVSPDEP 256

Query: 246 RAETGVYWGYTVRIASTLSQVFTQCPYKDGYDVTIGTSDRGLSIDTLPDKEVKYNHVLIV 305
           R ETGVYWGY VRIA ++S++FT+ PY  GYDVT+GTSDRG ++  +P++   +NH+LIV
Sbjct: 257 RRETGVYWGYQVRIAHSMSEIFTKSPYATGYDVTVGTSDRGTNVHEVPNRSYNFNHMLIV 316

Query: 306 FGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSRTIRTEEAILIALSGLRNKLQ 364
           FGGL G+E+AL +DE+L V+D  LLF+HYVNVLP QGSRTIRTEEA+LIAL+  + KLQ
Sbjct: 317 FGGLQGLESALANDEKLTVDDPELLFDHYVNVLPRQGSRTIRTEEALLIALAAFQEKLQ 375


>AY113589-1|AAM29594.1|  250|Drosophila melanogaster RH40775p
           protein.
          Length = 250

 Score =  186 bits (452), Expect = 6e-47
 Identities = 84/140 (60%), Positives = 111/140 (79%)

Query: 225 MLPALKNGKKLKGKIVSLTTPRAETGVYWGYTVRIASTLSQVFTQCPYKDGYDVTIGTSD 284
           M P  ++ +K +G +VS   PR ETGVYWGY VRIA ++S++FT+ PY  GYDVT+GTSD
Sbjct: 1   MEPQSESCRKQRGTLVSPDEPRRETGVYWGYQVRIAHSMSEIFTKSPYATGYDVTVGTSD 60

Query: 285 RGLSIDTLPDKEVKYNHVLIVFGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSR 344
           RG ++  +P++   +NH+LIVFGGL G+E+AL +DE+L V+D  LLF+HYVNVLP QGSR
Sbjct: 61  RGTNVHEVPNRSYNFNHMLIVFGGLQGLESALANDEKLTVDDPELLFDHYVNVLPRQGSR 120

Query: 345 TIRTEEAILIALSGLRNKLQ 364
           TIRTEEA+LIAL+ L+ KLQ
Sbjct: 121 TIRTEEALLIALAALQEKLQ 140


>AE013599-990|AAS64882.1|  250|Drosophila melanogaster CG12128-PB,
           isoform B protein.
          Length = 250

 Score =  186 bits (452), Expect = 6e-47
 Identities = 84/140 (60%), Positives = 111/140 (79%)

Query: 225 MLPALKNGKKLKGKIVSLTTPRAETGVYWGYTVRIASTLSQVFTQCPYKDGYDVTIGTSD 284
           M P  ++ +K +G +VS   PR ETGVYWGY VRIA ++S++FT+ PY  GYDVT+GTSD
Sbjct: 1   MEPQSESCRKQRGTLVSPDEPRRETGVYWGYQVRIAHSMSEIFTKSPYATGYDVTVGTSD 60

Query: 285 RGLSIDTLPDKEVKYNHVLIVFGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSR 344
           RG ++  +P++   +NH+LIVFGGL G+E+AL +DE+L V+D  LLF+HYVNVLP QGSR
Sbjct: 61  RGTNVHEVPNRSYNFNHMLIVFGGLQGLESALANDEKLTVDDPELLFDHYVNVLPRQGSR 120

Query: 345 TIRTEEAILIALSGLRNKLQ 364
           TIRTEEA+LIAL+ L+ KLQ
Sbjct: 121 TIRTEEALLIALAALQEKLQ 140


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.134    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,463,259
Number of Sequences: 52641
Number of extensions: 681909
Number of successful extensions: 1370
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1360
Number of HSP's gapped (non-prelim): 6
length of query: 405
length of database: 24,830,863
effective HSP length: 87
effective length of query: 318
effective length of database: 20,251,096
effective search space: 6439848528
effective search space used: 6439848528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)