Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002437-TA|BGIBMGA002437-PA|undefined
(163 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0224 - 8033098-8034552 32 0.20
08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675 29 1.4
06_03_0978 - 26494069-26495223 29 1.4
03_02_0465 - 8688454-8689899 29 2.4
09_04_0109 - 14674980-14675004,14675861-14676468 28 3.2
09_03_0001 - 11373469-11373862,11374072-11374264,11374414-113744... 28 3.2
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 28 3.2
06_03_1465 + 30342163-30342258,30343011-30343562 28 3.2
05_03_0629 + 16376575-16376689,16376792-16376839,16376927-163770... 28 3.2
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278... 28 3.2
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 28 3.2
11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600 27 5.6
10_07_0066 - 12554812-12554926,12555128-12555528 27 7.4
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 27 7.4
11_08_0069 + 28148713-28148829,28149205-28149327,28149372-28149824 27 9.7
03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477 27 9.7
03_02_0141 + 5867591-5867736,5867926-5868010,5868096-5868137,586... 27 9.7
>02_02_0224 - 8033098-8034552
Length = 484
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 80 SPSHSAPTTRWPVAVEQLINK-VDTEISRIATTLQPDIPTAVETRE 124
S S P WP+ EQ +N + TE++ +A L P P V +RE
Sbjct: 379 SVSSGVPMIAWPLHAEQKMNAAILTEVAGVALPLSPVAPGGVVSRE 424
>08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675
Length = 264
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 95 EQLINKVDTE--ISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGLRPPVLTAVS 152
+ LI+ +D+E I R+ QP I +E E + T T ++ T + PP A +
Sbjct: 86 QTLIDVLDSEWVICRVFKK-QPPIEHWLEMEEVETTTTTTTVQEHTPNRRRLPPAEAAAA 144
Query: 153 PPP 155
PPP
Sbjct: 145 PPP 147
>06_03_0978 - 26494069-26495223
Length = 384
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 21 IPQLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSL 60
+P L+ +L +S+TWN F++ P + P A + +SL
Sbjct: 47 LPFLYHRLFRTVSSTWNRFLT-VSPAKFPSAAAASVSLSL 85
>03_02_0465 - 8688454-8689899
Length = 481
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 116 IPTAVETREADDTYEAETSRDVTSSSGLRPPVLTAVSPPPL 156
I +A+ A + A D S GL+ +L A+SPPPL
Sbjct: 55 ILSAIRAPSAAPAFPAGVLLDEAHSYGLQDQLLAALSPPPL 95
>09_04_0109 - 14674980-14675004,14675861-14676468
Length = 210
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 137 VTSSSGLRPPVLTAVSPPPLRR 158
V +S LRP V AVSPPP R
Sbjct: 34 VAASFALRPMVAAAVSPPPRHR 55
>09_03_0001 -
11373469-11373862,11374072-11374264,11374414-11374482,
11374858-11374984,11375223-11375485,11375697-11375785,
11375832-11375909,11376070-11376141,11376234-11376372,
11378857-11379323,11380781-11381345,11382553-11382622
Length = 841
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 71 LAVMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAV-ETREADDTY 129
++++ADARL + ++ W V ++ IS +AT +P + T V + +E+
Sbjct: 761 ISLVADARLKDLYDI-SSMWKVVDTAMLC-----ISEVATQ-RPTMSTVVLQLKESLALE 813
Query: 130 EAETSRDVTSSS 141
EA SRD+T+SS
Sbjct: 814 EARDSRDITTSS 825
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 28.3 bits (60), Expect = 3.2
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 31 NMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPSHSAPTTRW 90
N S ++ + Y P SP AL + V+Q G +++L + + S PT
Sbjct: 874 NTSGVFSNSNTNYSP--SP-ALSTQAVPPAKVVQNGNSLKLPTLPKLNPAAQRSNPTESN 930
Query: 91 PVAVEQLIN--KVDTEISRIATTL---QPDIPTAVETREADDTYEAETSRDVTSSSG 142
VEQ N ++ T++S T L + V+T++ +D T+ D G
Sbjct: 931 KAEVEQADNLKEISTKVSPAQTPLVKIPKNSEMGVKTKKDNDGASHATTVDQNPKGG 987
>06_03_1465 + 30342163-30342258,30343011-30343562
Length = 215
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 77 ARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIP-------TAVETREADDTY 129
ARL+ S T+WP + + E+S + I +AVET T
Sbjct: 72 ARLAASVRGAATKWPAQLPSSATVAEVEVSGVLADAMAAIASASAAVFSAVETMSTMATA 131
Query: 130 EAETSRDVTSSSGLRPPVLTAV 151
A ++ +SSS + P+L ++
Sbjct: 132 AAASTCSSSSSSSSKTPLLISL 153
>05_03_0629 +
16376575-16376689,16376792-16376839,16376927-16377012,
16377791-16377878,16378387-16378472,16378604-16378690,
16379111-16379293,16379387-16379470,16379590-16379651,
16379752-16379827,16379906-16379968,16380060-16380141,
16380840-16380916,16381502-16381549,16381681-16381743
Length = 415
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 131 AETSRDVTSSSGLRPPVLTAVSPPPLRRRM 160
A S SS+ RPP+L+ SPPP R+
Sbjct: 8 AAASSTAASSATFRPPLLSLRSPPPSSLRL 37
>05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,
2787114-2787176,2787299-2787397,2787726-2787884,
2788420-2788491,2788567-2788699,2788813-2788877,
2789016-2789091,2789236-2789337,2789524-2789716,
2790576-2790654,2792939-2793007,2793261-2793311,
2793680-2793742,2793926-2794041,2794263-2794347,
2794898-2794957,2795594-2795639,2796011-2796084,
2796350-2796400,2796474-2796674,2796747-2796791,
2797063-2797156,2797226-2797371,2797510-2797739,
2798136-2798196,2798290-2798347,2799020-2799513
Length = 1151
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 112 LQPDIPTAVETREADDTYEAETSRDVTSSSGLRPP 146
+ PD P E EADD S + SG RPP
Sbjct: 970 VDPDAPEEDEENEADDVDGYTQSAPASRRSGTRPP 1004
>01_07_0016 -
40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 74 MADARLSPSHSAPTTR--WPVAVEQLINKVDTEISRIATTLQPDI 116
M +L + AP R WP +L N DT IS L+PD+
Sbjct: 756 MRHGQLGRMNEAPVVRDEWPANFGRLDNVTDTNISGRLPQLEPDL 800
>11_06_0523 - 24570683-24571126,24571210-24571808,24573300-24573600
Length = 447
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 123 READDTYEAETSRDVTSSSGLRPPVLTAV 151
R+ + + + R TSS+GLRPP L A+
Sbjct: 272 RDGSEPWTSTRRRYDTSSTGLRPPPLAAI 300
>10_07_0066 - 12554812-12554926,12555128-12555528
Length = 171
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 67 ETVRLAVMADARLSPSHSAPTTRWPVAVEQLINK-VDTEISRIATTLQPDIPTAVETREA 125
E +RLA A + P+H+A P+A + + + + RI TT +P AV +
Sbjct: 93 ELMRLAGSACSPPQPAHAAALPEMPIARKASLQRFLQKRKHRITTTSEPYKKAAVASPAP 152
Query: 126 DDTYEAETSRD 136
+ ++ +D
Sbjct: 153 EKSFAVAPVKD 163
>06_01_0844 -
6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 12 TKLFPTPSAIPQLWEKLHENMSN 34
+K+F T + +P LWE+L ++ N
Sbjct: 174 SKIFSTENVVPVLWEQLKVSLKN 196
>11_08_0069 + 28148713-28148829,28149205-28149327,28149372-28149824
Length = 230
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 120 VETREADDTYEAETSRDVTSSSGLRPPVLTAVSPPPLRRRMTH 162
+E ADD Y +S + SG + P L + +RR+ TH
Sbjct: 15 LEHAAADDDYGGASSYHLPLPSGFKIPRLPTTACALMRRKKTH 57
>03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477
Length = 668
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 108 IATTLQPDIPTAVETREADDTYEAETSRDVTSS 140
+A L+ IP+ +T DDT + TS ++SS
Sbjct: 83 VAEMLRDYIPSCAKTCSGDDTLSSSTSSSLSSS 115
>03_02_0141 +
5867591-5867736,5867926-5868010,5868096-5868137,
5868255-5868423,5868792-5868844,5869022-5869240,
5869507-5869553,5869732-5869786
Length = 271
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 9 SPLTKLFPTPSAIPQLWEKLHENMSNTWNEFV---SEYDPVESPRALKSMPGM 58
+P + P+P+++ Q N+ N W+ + + Y P LK MPG+
Sbjct: 13 APSSSPSPSPASLRQWRPAAQRNLRNQWSRLLAAKARYMPGMDLGVLKDMPGI 65
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.125 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,040,915
Number of Sequences: 37544
Number of extensions: 188956
Number of successful extensions: 567
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 558
Number of HSP's gapped (non-prelim): 17
length of query: 163
length of database: 14,793,348
effective HSP length: 77
effective length of query: 86
effective length of database: 11,902,460
effective search space: 1023611560
effective search space used: 1023611560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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