Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002437-TA|BGIBMGA002437-PA|undefined
(163 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U84011-1|AAB48470.1| 1516|Homo sapiens glycogen debranching enzy... 33 0.36
U84010-1|AAB48469.1| 1532|Homo sapiens glycogen debranching enzy... 33 0.36
U84009-1|AAB48468.1| 1532|Homo sapiens glycogen debranching enzy... 33 0.36
U84008-1|AAB48467.1| 1532|Homo sapiens glycogen debranching enzy... 33 0.36
U84007-1|AAB48466.1| 1532|Homo sapiens glycogen debranching enzy... 33 0.36
M85168-1|AAB41040.1| 1515|Homo sapiens glycogen debranching enzy... 33 0.36
BC078663-1|AAH78663.1| 1532|Homo sapiens amylo-1, 6-glucosidase,... 33 0.36
AB208867-1|BAD92104.1| 1533|Homo sapiens amylo-1,6-glucosidase, ... 33 0.36
AB035443-1|BAA88405.1| 1532|Homo sapiens glycogen-debranching en... 33 0.36
X58964-1|CAA41730.1| 979|Homo sapiens MHC class II regulatory ... 29 5.8
BC049826-1|AAH49826.1| 979|Homo sapiens regulatory factor X, 1 ... 29 5.8
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 29 5.8
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 29 5.8
AL645608-8|CAI15571.2| 676|Homo sapiens chromosome 1 open readi... 29 7.7
AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens ... 29 7.7
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 29 7.7
AF048730-1|AAC39664.1| 726|Homo sapiens cyclin T1 protein. 29 7.7
AF045161-1|AAC39638.1| 726|Homo sapiens cyclin T protein. 29 7.7
>U84011-1|AAB48470.1| 1516|Homo sapiens glycogen debranching enzyme
isoform 6 protein.
Length = 1516
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 281 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 339
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 340 TFIPHDKGPAAIEECCN 356
>U84010-1|AAB48469.1| 1532|Homo sapiens glycogen debranching enzyme
isoform 4 protein.
Length = 1532
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 297 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 355
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 356 TFIPHDKGPAAIEECCN 372
>U84009-1|AAB48468.1| 1532|Homo sapiens glycogen debranching enzyme
isoform 3 protein.
Length = 1532
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 297 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 355
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 356 TFIPHDKGPAAIEECCN 372
>U84008-1|AAB48467.1| 1532|Homo sapiens glycogen debranching enzyme
isoform 2 protein.
Length = 1532
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 297 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 355
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 356 TFIPHDKGPAAIEECCN 372
>U84007-1|AAB48466.1| 1532|Homo sapiens glycogen debranching enzyme
isoform 1 protein.
Length = 1532
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 297 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 355
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 356 TFIPHDKGPAAIEECCN 372
>M85168-1|AAB41040.1| 1515|Homo sapiens glycogen debranching enzyme
protein.
Length = 1515
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 280 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 338
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 339 TFIPHDKGPAAIEECCN 355
>BC078663-1|AAH78663.1| 1532|Homo sapiens amylo-1, 6-glucosidase,
4-alpha-glucanotransferase (glycogen debranching enzyme
protein.
Length = 1532
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 297 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 355
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 356 TFIPHDKGPAAIEECCN 372
>AB208867-1|BAD92104.1| 1533|Homo sapiens amylo-1,6-glucosidase,
4-alpha-glucanotransferase isoform 1 variant protein.
Length = 1533
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 298 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 356
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 357 TFIPHDKGPAAIEECCN 373
>AB035443-1|BAA88405.1| 1532|Homo sapiens glycogen-debranching
enzyme protein.
Length = 1532
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 23 QLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPS 82
+LWE +++ +F E+ R KS P LT+IQ E R D ++ +
Sbjct: 297 KLWEFFQVDVNKAVEQF-RRLLTQENRRVTKSDPNQHLTIIQDPEYRRFGCTVDMNIALT 355
Query: 83 HSAPTTRWPVAVEQLIN 99
P + P A+E+ N
Sbjct: 356 TFIPHDKGPAAIEECCN 372
>X58964-1|CAA41730.1| 979|Homo sapiens MHC class II regulatory
factor RFX protein.
Length = 979
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 104 EISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGLRPPVL--TAVSPP 154
E + +AT+L P P E E ++ E E +D++ ++G P L + PP
Sbjct: 908 EFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPETLEPP 960
>BC049826-1|AAH49826.1| 979|Homo sapiens regulatory factor X, 1
(influences HLA class II expression) protein.
Length = 979
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 104 EISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGLRPPVL--TAVSPP 154
E + +AT+L P P E E ++ E E +D++ ++G P L + PP
Sbjct: 908 EFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPETLEPP 960
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 77 ARLSPSH-SAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSR 135
A +PS S P T PV+ + + + +S + + T+ E + T E +
Sbjct: 443 ATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMP 502
Query: 136 DVTSSSGLRPPVLTAVSPPPL 156
T S G P +VS P+
Sbjct: 503 TSTPSEGSTPLTSMSVSTMPV 523
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 77 ARLSPSH-SAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSR 135
A +PS S P T PV+ + + + +S + + T+ E + T E +
Sbjct: 443 ATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMP 502
Query: 136 DVTSSSGLRPPVLTAVSPPPL 156
T S G P +VS P+
Sbjct: 503 TSTPSEGSTPLTSMSVSTMPV 523
>AL645608-8|CAI15571.2| 676|Homo sapiens chromosome 1 open reading
frame 170 protein.
Length = 676
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 78 RLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDV 137
R + H+ TT W + K D +S A+ QPD AV T ++ + + +
Sbjct: 159 RRAKLHTVSTTVWEALPDVSRAKSDMAVSTPASEPQPDRDMAVSTPASEPQSDRDMAVS- 217
Query: 138 TSSSGLRPPVLTAVSPP 154
T +S +P AVS P
Sbjct: 218 TPASEPQPDTDMAVSTP 234
>AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens
cDNA FLJ41861 fis, clone NTONG2008672. ).
Length = 676
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 78 RLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDV 137
R + H+ TT W + K D +S A+ QPD AV T ++ + + +
Sbjct: 159 RRAKLHTVSTTVWEALPDVSRAKSDMAVSTPASEPQPDRDMAVSTPASEPQSDRDMAVS- 217
Query: 138 TSSSGLRPPVLTAVSPP 154
T +S +P AVS P
Sbjct: 218 TPASEPQPDTDMAVSTP 234
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 77 ARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRD 136
AR + SAPTT + T + TT PT+ T + + +
Sbjct: 401 ARTTSIISAPTT-------STTSSPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSS 453
Query: 137 VTSSSGLRPPVLTAVSPPPLRRRMTHH 163
TSSSG P +T S + + T H
Sbjct: 454 TTSSSGTTPSPVTTTSTASVSKTSTSH 480
>AF048730-1|AAC39664.1| 726|Homo sapiens cyclin T1 protein.
Length = 726
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 88 TRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGL---- 143
T + + +N + + +S A +QP PTA E Y S ++S SG
Sbjct: 651 TTQTIDYQDTVNMLHSLLS--AQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKP 708
Query: 144 RPPVLTAVSPPPL 156
RPP L + PPPL
Sbjct: 709 RPPPLPSEPPPPL 721
>AF045161-1|AAC39638.1| 726|Homo sapiens cyclin T protein.
Length = 726
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 88 TRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGL---- 143
T + + +N + + +S A +QP PTA E Y S ++S SG
Sbjct: 651 TTQTIDYQDTVNMLHSLLS--AQGVQPTQPTAFEFVRPYSDYLNPRSGGISSRSGNTDKP 708
Query: 144 RPPVLTAVSPPPL 156
RPP L + PPPL
Sbjct: 709 RPPPLPSEPPPPL 721
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.125 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,004,213
Number of Sequences: 224733
Number of extensions: 977374
Number of successful extensions: 2444
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2397
Number of HSP's gapped (non-prelim): 54
length of query: 163
length of database: 73,234,838
effective HSP length: 84
effective length of query: 79
effective length of database: 54,357,266
effective search space: 4294224014
effective search space used: 4294224014
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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