Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002437-TA|BGIBMGA002437-PA|undefined
(163 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 33 0.13
U51998-6|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.23
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 31 0.40
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 29 1.2
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 1.6
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 1.6
Z70205-5|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 28 2.8
AL021175-3|CAA15963.2| 467|Caenorhabditis elegans Hypothetical ... 28 3.8
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 28 3.8
Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81462-7|CAB03846.3| 545|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z70269-2|CAA94224.1| 143|Caenorhabditis elegans Hypothetical pr... 27 5.0
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 5.0
AF106589-7|AAN73853.1| 843|Caenorhabditis elegans Hypothetical ... 27 5.0
AF106589-6|AAN73852.1| 841|Caenorhabditis elegans Hypothetical ... 27 5.0
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 5.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 5.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 5.0
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 5.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 5.0
AL132948-34|CAD31829.1| 314|Caenorhabditis elegans Hypothetical... 27 6.6
AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical ... 27 8.7
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 32.7 bits (71), Expect = 0.13
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 16 PTPSAIPQ--LWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAV 73
P P PQ E LH+ + N + S + PV S L +M G + + G+ +
Sbjct: 170 PLPGTRPQRDFSEMLHK-LLNINSTVTSRFLPVVSQSPLFAMEGPWQNLFELGKDKDMIE 228
Query: 74 MADARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVE-TREADDTYEAE 132
+ A P PVA I K+D+ TT++P E +E + + +
Sbjct: 229 LLAASQFKPQLPPVASVPVAPVIDITKIDSPYRATFTTMKPRKSQKPEKKKEVFNVFTTK 288
Query: 133 TSRDVTSSS 141
T+ +T+++
Sbjct: 289 TNPQITTTT 297
>U51998-6|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.9 bits (69), Expect = 0.23
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 80 SPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRD--- 136
+P + PT++ PV L+ + T + TT+ P T T T A T+
Sbjct: 554 APPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPV 613
Query: 137 VTSSSGLRP--PVLTAVSPP 154
VT+S L P P SPP
Sbjct: 614 VTTSPTLAPTSPTKLPTSPP 633
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 61 TVIQYGETVRLAVMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTA- 119
T + E M + +S ++ TT + ++ TE I+TT++P+ +
Sbjct: 430 TTTESNEQSSTTGMEFSTMSTTYEPITTSLETSTTDMLTNTSTEEPDISTTIEPNAQSTT 489
Query: 120 --VETREADDTYEAETSRDVTSSS 141
+E+ TYE ET+ TSS+
Sbjct: 490 YEMESSTVSVTYEPETTSLETSST 513
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 102 DTEISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGLRPPVLTAVSPPP 155
D + R+A P IP A+E + E RD+ S S P + PPP
Sbjct: 254 DMDCLRLADGSPPQIPVALEDHINIPSTSQENPRDIRSLSHQLPMIPPQQPPPP 307
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 82 SHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSS 141
S ++ +T P + E T +R TT+ P PT TS VTS++
Sbjct: 213 SSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTT 272
Query: 142 GLRPPVLTAV 151
V+T V
Sbjct: 273 VPTTTVVTTV 282
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 82 SHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSS 141
S ++ +T P + E T +R TT+ P PT TS VTS++
Sbjct: 195 SSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTT 254
Query: 142 GLRPPVLTAV 151
V+T V
Sbjct: 255 VPTTTVVTTV 264
>Z70205-5|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/92 (21%), Positives = 38/92 (41%)
Query: 70 RLAVMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTY 129
R ++M LSPS++APT P + +D + +T+ + + + T
Sbjct: 301 RQSLMNSGYLSPSNTAPTVIKPYPPSSTESSIDFTTATESTSTPTSTTSDITSTTTAPTS 360
Query: 130 EAETSRDVTSSSGLRPPVLTAVSPPPLRRRMT 161
+ S D +++ TA +P P + T
Sbjct: 361 ASTYSTDSWATARQELVDFTATTPEPFDSKST 392
>AL021175-3|CAA15963.2| 467|Caenorhabditis elegans Hypothetical
protein Y6E2A.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 5 YTQQSPL-TKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 44
+T ++P+ +K+ TP + K HE+M N+ N+ + + D
Sbjct: 220 HTTKNPIPSKIIVTPQENDEAITKFHESMKNSENKIIRKID 260
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 78 RLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDV 137
R+ PS AP R A+E+ + + E+S + ET +T E S
Sbjct: 165 RIRPSPPAPPPRVD-AIEEAVLRAVLEVSTSIAPETSSLEAEAETTTVSETTTTEVSTTA 223
Query: 138 TSSSGLRP 145
+ S+ L P
Sbjct: 224 SESTSLFP 231
>Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 27.5 bits (58), Expect = 5.0
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 19 SAIPQLWEKLHENMSNTWNEFVSEYDPVESPRALK-SMPGMSLTVIQYGETVRLAVMADA 77
S IP++ EK+ E ++ W + VS + PR + S ++T YG A +
Sbjct: 164 SPIPEVEEKIQEVLNEYWTKNVSYIPSPDGPRYINLSHRDGTVTTFTYGAEEN----ATS 219
Query: 78 RLSPSHSAPTTRWPVAVEQLINKVDTEISRIATT 111
+P +A T P ++ ++ K + + AT+
Sbjct: 220 SSAPGAAAGT---PASLANIVRKKEAVKAAYATS 250
>Z81462-7|CAB03846.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 27.5 bits (58), Expect = 5.0
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 19 SAIPQLWEKLHENMSNTWNEFVSEYDPVESPRALK-SMPGMSLTVIQYGETVRLAVMADA 77
S IP++ EK+ E ++ W + VS + PR + S ++T YG A +
Sbjct: 164 SPIPEVEEKIQEVLNEYWTKNVSYIPSPDGPRYINLSHRDGTVTTFTYGAEEN----ATS 219
Query: 78 RLSPSHSAPTTRWPVAVEQLINKVDTEISRIATT 111
+P +A T P ++ ++ K + + AT+
Sbjct: 220 SSAPGAAAGT---PASLANIVRKKEAVKAAYATS 250
>Z70269-2|CAA94224.1| 143|Caenorhabditis elegans Hypothetical
protein ZK1086.2 protein.
Length = 143
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 16 PTPSAIPQLWEKLHENMSNTWN--EFVSEY 43
PTP IP +WE+ E + N E+VS Y
Sbjct: 7 PTPCQIPPIWERNAEMFEDARNFIEYVSTY 36
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 51 ALKSMPGMSLTVIQYGETVRLA--VMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRI 108
++K P + + ET ++ + + +R++ H T W + + Q+ + I
Sbjct: 3109 SVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDIVSYKAI 3168
Query: 109 ATTLQPDIPTAVETREADDTYEA 131
AT I TA T + EA
Sbjct: 3169 ATN---SIGTATSTSKITTKVEA 3188
>AF106589-7|AAN73853.1| 843|Caenorhabditis elegans Hypothetical
protein Y44E3A.6b protein.
Length = 843
Score = 27.5 bits (58), Expect = 5.0
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 24 LWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPSH 83
L+E+L+E+ + NE+++ + A+ +M + Q GE R+A++ +P
Sbjct: 642 LFERLNEHFRHGINEYLATTSQMIQGTAMATMQMAAQQQQQKGELERIALLRMIETNPEE 701
Query: 84 SAPTTRWPVAVEQLINKVDTEISR-IATTLQPD 115
AVE +NK D I + + + P+
Sbjct: 702 ---------AVEAALNKADMSILEFVCSKINPE 725
>AF106589-6|AAN73852.1| 841|Caenorhabditis elegans Hypothetical
protein Y44E3A.6a protein.
Length = 841
Score = 27.5 bits (58), Expect = 5.0
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 24 LWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGMSLTVIQYGETVRLAVMADARLSPSH 83
L+E+L+E+ + NE+++ + A+ +M + Q GE R+A++ +P
Sbjct: 642 LFERLNEHFRHGINEYLATTSQMIQGTAMATMQMAAQQQQQKGELERIALLRMIETNPEE 701
Query: 84 SAPTTRWPVAVEQLINKVDTEISR-IATTLQPD 115
AVE +NK D I + + + P+
Sbjct: 702 ---------AVEAALNKADMSILEFVCSKINPE 725
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 51 ALKSMPGMSLTVIQYGETVRLA--VMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRI 108
++K P + + ET ++ + + +R++ H T W + + Q+ + I
Sbjct: 2469 SVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDIVSYKAI 2528
Query: 109 ATTLQPDIPTAVETREADDTYEA 131
AT I TA T + EA
Sbjct: 2529 ATN---SIGTATSTSKITTKVEA 2548
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 51 ALKSMPGMSLTVIQYGETVRLA--VMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRI 108
++K P + + ET ++ + + +R++ H T W + + Q+ + I
Sbjct: 3109 SVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDIVSYKAI 3168
Query: 109 ATTLQPDIPTAVETREADDTYEA 131
AT I TA T + EA
Sbjct: 3169 ATN---SIGTATSTSKITTKVEA 3188
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 51 ALKSMPGMSLTVIQYGETVRLA--VMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRI 108
++K P + + ET ++ + + +R++ H T W + + Q+ + I
Sbjct: 3109 SVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDIVSYKAI 3168
Query: 109 ATTLQPDIPTAVETREADDTYEA 131
AT I TA T + EA
Sbjct: 3169 ATN---SIGTATSTSKITTKVEA 3188
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 51 ALKSMPGMSLTVIQYGETVRLA--VMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRI 108
++K P + + ET ++ + + +R++ H T W + + Q+ + I
Sbjct: 2469 SVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDIVSYKAI 2528
Query: 109 ATTLQPDIPTAVETREADDTYEA 131
AT I TA T + EA
Sbjct: 2529 ATN---SIGTATSTSKITTKVEA 2548
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 51 ALKSMPGMSLTVIQYGETVRLA--VMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRI 108
++K P + + ET ++ + + +R++ H T W + + Q+ + I
Sbjct: 3109 SVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDIVSYKAI 3168
Query: 109 ATTLQPDIPTAVETREADDTYEA 131
AT I TA T + EA
Sbjct: 3169 ATN---SIGTATSTSKITTKVEA 3188
>AL132948-34|CAD31829.1| 314|Caenorhabditis elegans Hypothetical
protein Y39B6A.37 protein.
Length = 314
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 115 DIPTAVETREADDTYEAETSRDVTSSSGL 143
++P A + + DD + DVT+SSGL
Sbjct: 215 NVPCATTSEDEDDVITTDNFDDVTTSSGL 243
>AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical
protein Y57E12B.4 protein.
Length = 405
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/80 (20%), Positives = 29/80 (36%)
Query: 76 DARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSR 135
D +S P+T + E + I+++ TT + PT D + +T+
Sbjct: 272 DPVISDKTETPSTNFSTVAENTASSTPIYITKVPTTFERSEPTMGTEATTDPVFPDKTTN 331
Query: 136 DVTSSSGLRPPVLTAVSPPP 155
T S R ++ P
Sbjct: 332 FATVSEHSRSSTPNYITEHP 351
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.125 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,117,038
Number of Sequences: 27539
Number of extensions: 155921
Number of successful extensions: 444
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 432
Number of HSP's gapped (non-prelim): 26
length of query: 163
length of database: 12,573,161
effective HSP length: 76
effective length of query: 87
effective length of database: 10,480,197
effective search space: 911777139
effective search space used: 911777139
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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