GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002436-TA|BGIBMGA002436-PA|undefined
         (268 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    28   0.085
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.7  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 0.085
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 113 GQFMFPRLRHLLVSCWGNYAWDVNVRFRFENHFIVANAV 151
           G+F+ P L +LLV+ +  Y W   + F +   ++ A AV
Sbjct: 113 GRFLAPNLTYLLVALYSGYVWTDILGFGYFREYL-AEAV 150


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 61  FEFIKTDTVRTLLDTHRNQGIINVLLAVKGNPNV---DEIKGKLIEHVIDKRDRNGQFMF 117
           F+ IK D  R + D  +    + VLL+V GN +V   DE K     ++++   R  +  F
Sbjct: 79  FDVIK-DNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTR--RLAF 135

Query: 118 PRLRHLLVSCWG 129
               + LV  +G
Sbjct: 136 VNSAYTLVKAYG 147


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query: 104 HVIDKRDRNGQFMFPRLRHL 123
           H ++KR ++GQ+ +  L H+
Sbjct: 270 HEVEKRAQDGQYEYRSLSHV 289


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 135 VNVRFRFENHFIVANAVYRGRPVTESNIQEYISDIVSKYFSPDQ 178
           VNV +R E   +V N   +   V +S +    S   +++F  D+
Sbjct: 263 VNVAYRMETWNVVFNGSRKNLDVMKSFVNFRPSFTAARFFEIDR 306


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 196 YILVRVHHLLLSGAKSIN 213
           YIL R+H+ L S  + IN
Sbjct: 231 YILCRLHYKLTSVMQKIN 248


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 196 YILVRVHHLLLSGAKSIN 213
           YIL R+H+ L S  + IN
Sbjct: 231 YILCRLHYKLTSVMQKIN 248


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.139    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,338
Number of Sequences: 317
Number of extensions: 2423
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 268
length of database: 114,650
effective HSP length: 56
effective length of query: 212
effective length of database: 96,898
effective search space: 20542376
effective search space used: 20542376
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)