GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002436-TA|BGIBMGA002436-PA|undefined
         (268 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48669| Best HMM Match : DUF1298 (HMM E-Value=0.0015)                74   1e-13
SB_23661| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)               63   2e-10
SB_40048| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)               63   2e-10
SB_59651| Best HMM Match : UPF0089 (HMM E-Value=5.8e-06)               49   3e-06
SB_30985| Best HMM Match : DUF1450 (HMM E-Value=1.5)                   36   0.026
SB_22790| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.3  

>SB_48669| Best HMM Match : DUF1298 (HMM E-Value=0.0015)
          Length = 529

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 64  IKTDTVRTLLDTHRNQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHL 123
           +K D      +T  N+ II+  + ++G PNV E+K  + E ++ + +   + + PR+   
Sbjct: 99  LKEDDAVWQQETPTNRHIIHAFMLMEGEPNVAELKSIVCERLVFRVNDQNERICPRMTQA 158

Query: 124 LVSCWGNYAWDVNVRFRFENHFIVANAVYRGR-PVTESNIQEYISDIVSKYFSPDQPPWQ 182
           +    G Y W  + +F  + HF     V+ G+   T+  ++E IS+I S     +Q PWQ
Sbjct: 159 IKRYHGVYVWQEDCQFSIDKHF----CVWDGKLAKTKQELEEVISEIASMSLPDNQSPWQ 214

Query: 183 YIIIPCAATEPKYYILVRVHH 203
           + ++P     P +  L+R  H
Sbjct: 215 FYVVPTKFESPSFVFLLRAIH 235


>SB_23661| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)
          Length = 490

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 64  IKTDTVRTLLDTHRNQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHL 123
           + ++ V  L ++  N+  IN L  + G P++D+++  ++E VI     N +  + R++  
Sbjct: 61  LASEDVPFLHESVTNRNFINGLFVINGKPDIDKLRALVMERVIC----NAEPSYARMKKR 116

Query: 124 LVSCWGNYAWDVNVRFRFENHFIVANAVYRGRPVTESNIQEYISDIVSKYFSPDQPPWQY 183
           +V  +G Y W     F    H    +  +   P  E  ++  + ++ S+    D  PW +
Sbjct: 117 VVKKYGRYVWQDEDEFDISRHVKFYDGPF---PCNEEELKAILGELSSEPMPEDISPWMF 173

Query: 184 IIIPCAATEPKYYILVRVHHLLLSG 208
            ++    ++ K+ I +R+HH L  G
Sbjct: 174 QVMSYNTSKEKFAICIRIHHALGDG 198


>SB_40048| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)
          Length = 535

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 64  IKTDTVRTLLDTHRNQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHL 123
           + ++ V  L ++  N+  IN L  + G P++D+++  ++E VI     N +  + R++  
Sbjct: 61  LASEDVPFLHESVTNRNFINGLFVINGKPDIDKLRALVMERVIC----NAEPSYARMKKR 116

Query: 124 LVSCWGNYAWDVNVRFRFENHFIVANAVYRGRPVTESNIQEYISDIVSKYFSPDQPPWQY 183
           +V  +G Y W     F    H    +  +   P  E  ++  + ++ S+    D  PW +
Sbjct: 117 VVKKYGRYVWQDEDEFDISRHVKFYDGPF---PCNEEELKAILGELSSEPMPEDISPWMF 173

Query: 184 IIIPCAATEPKYYILVRVHHLLLSG 208
            ++    ++ K+ I +R+HH L  G
Sbjct: 174 QVMSYNTSKEKFAICIRIHHALGDG 198


>SB_59651| Best HMM Match : UPF0089 (HMM E-Value=5.8e-06)
          Length = 425

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 94  VDEIKGKLIEHVIDKRDRNGQFMFPRLRHLLVSCWGNYAWDVNVRFRFENHFIVANAVYR 153
           + E +  +   ++D R+  G+  FPR R ++   +  Y +  +  F  E+H       Y+
Sbjct: 80  MSEFREVVRTRLVDSRNSKGELSFPRARKMVRPGYFQYFFQDDPDFDIEDHVFK----YQ 135

Query: 154 GRPV-TESNIQEYISDIVSKYFSPDQPPWQYIIIPCAATEPKYYILVRVHHLLLSG 208
           G P  ++  ++  +S++ SK F   + PW +  +P    +     + R+HH +  G
Sbjct: 136 GDPPKSKQELEAIVSEMYSKPFPEGKSPWYFCCVPTDYGDKSVAAIFRMHHCMADG 191


>SB_30985| Best HMM Match : DUF1450 (HMM E-Value=1.5)
          Length = 599

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 18/137 (13%)

Query: 78  NQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHLLVSCWGNYAWDVNV 137
           N  + ++   V+G    +EI+  + E+ +   +    F FP+LR   V     +AW    
Sbjct: 132 NVAVTSIFFLVEGQITQEEIRDFIDENWLYYCNTKKNFRFPKLREFAVKICSGFAWKPIA 191

Query: 138 RFRFENHFIVANAVYRGRPVTESN--IQEYISDIV-SKYFSPD------QPPWQYIIIPC 188
            F+  N FI+ +        T+ N   Q+Y +DI  S Y  P+      Q  W+ ++ P 
Sbjct: 192 NFQTRN-FILTS--------TDDNKLFQDYFNDIENSDYLRPEDAENGKQFLWRIVLFPN 242

Query: 189 AATEPKYYILVRVHHLL 205
            +       L+ +H  L
Sbjct: 243 FSDSEDTGFLLEMHRSL 259


>SB_22790| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 422

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 116 MFPRLRHLLVSCWG-NYAW-DVNVRFRFENHFIV 147
           MFP  RH    CWG N  W ++NV F+    FI+
Sbjct: 326 MFPPYRHEPRPCWGPNSGWPELNVTFKLAIIFIL 359


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.325    0.139    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,492,264
Number of Sequences: 59808
Number of extensions: 321266
Number of successful extensions: 731
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 721
Number of HSP's gapped (non-prelim): 7
length of query: 268
length of database: 16,821,457
effective HSP length: 81
effective length of query: 187
effective length of database: 11,977,009
effective search space: 2239700683
effective search space used: 2239700683
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)