GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002436-TA|BGIBMGA002436-PA|undefined
         (268 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058338-1|AAL13567.1|  689|Drosophila melanogaster GH11223p pro...   170   1e-42
AE014134-2986|AAF53716.2|  689|Drosophila melanogaster CG33120-P...   170   1e-42
AY102657-1|AAM27486.1|  546|Drosophila melanogaster GH05104p pro...    32   0.95 
AE014297-3460|AAF56237.1|  546|Drosophila melanogaster CG13607-P...    32   0.95 

>AY058338-1|AAL13567.1|  689|Drosophila melanogaster GH11223p
           protein.
          Length = 689

 Score =  170 bits (414), Expect = 1e-42
 Identities = 85/261 (32%), Positives = 145/261 (55%), Gaps = 8/261 (3%)

Query: 14  QRIVEEIYTCCAFWIAASALPALAVSYXXXXXXXXXXXXXXXXXYPDFEFIKTDTVRTLL 73
           Q +   + T   F +A   +P L +S+                 YP+    K+  +RTL+
Sbjct: 6   QEVKSLLKTVFCFVVAMMLVPLLMLSFLCAHFGNELSNYVLSIKYPNLTISKSKKIRTLI 65

Query: 74  DTHRNQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHLLVSCWGNYAW 133
           DT +N G+ + LL V+G+ + + I+    +H+ D RD+ G   FP+LR  LV+CWG+YAW
Sbjct: 66  DTPKNAGVFHFLLQVEGDCDFERIRMAYAQHLTDLRDKTGMLRFPKLRQKLVTCWGHYAW 125

Query: 134 -DVNVRFRFENHFIVANAVYRGRPVTESNIQEYISDIVSKYFSPDQPPWQYIIIPCAATE 192
            + +  F   NH +++   YRGRPV+ESNIQEY+S++ +KY   D P WQ I+IP + + 
Sbjct: 126 VNDSSGFNINNHVLLSTHKYRGRPVSESNIQEYVSELATKYIPSDLPQWQVIVIPNSDST 185

Query: 193 PKYYILVRVHHLLLSGAKSINIGDLLLVEQLKQTDRM----AQEYTQQSP-LTKLFPTPS 247
             YYIL+++HHL+++  + +++ ++LL++   +   M      ++   SP L++    P 
Sbjct: 186 QPYYILIKLHHLIIAEEEDLHVSEMLLLQDPHKKTTMTLSDGLDWDSSSPKLSRFVRKPE 245

Query: 248 AIPQLWESFMK--ICRYMERI 266
            I +L    +   ICR+ + I
Sbjct: 246 HISRLINHIIHLIICRWQKFI 266


>AE014134-2986|AAF53716.2|  689|Drosophila melanogaster CG33120-PA
           protein.
          Length = 689

 Score =  170 bits (414), Expect = 1e-42
 Identities = 85/261 (32%), Positives = 145/261 (55%), Gaps = 8/261 (3%)

Query: 14  QRIVEEIYTCCAFWIAASALPALAVSYXXXXXXXXXXXXXXXXXYPDFEFIKTDTVRTLL 73
           Q +   + T   F +A   +P L +S+                 YP+    K+  +RTL+
Sbjct: 6   QEVKSLLKTVFCFVVAMMLVPLLMLSFLCAHFGNELSNYVLSIKYPNLTISKSKKIRTLI 65

Query: 74  DTHRNQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHLLVSCWGNYAW 133
           DT +N G+ + LL V+G+ + + I+    +H+ D RD+ G   FP+LR  LV+CWG+YAW
Sbjct: 66  DTPKNAGVFHFLLQVEGDCDFERIRMAYAQHLTDLRDKTGMLRFPKLRQKLVTCWGHYAW 125

Query: 134 -DVNVRFRFENHFIVANAVYRGRPVTESNIQEYISDIVSKYFSPDQPPWQYIIIPCAATE 192
            + +  F   NH +++   YRGRPV+ESNIQEY+S++ +KY   D P WQ I+IP + + 
Sbjct: 126 VNDSSGFNINNHVLLSTHKYRGRPVSESNIQEYVSELATKYIPSDLPQWQVIVIPNSDST 185

Query: 193 PKYYILVRVHHLLLSGAKSINIGDLLLVEQLKQTDRM----AQEYTQQSP-LTKLFPTPS 247
             YYIL+++HHL+++  + +++ ++LL++   +   M      ++   SP L++    P 
Sbjct: 186 QPYYILIKLHHLIIAEEEDLHVSEMLLLQDPHKKTTMTLSDGLDWDSSSPKLSRFVRKPE 245

Query: 248 AIPQLWESFMK--ICRYMERI 266
            I +L    +   ICR+ + I
Sbjct: 246 HISRLINHIIHLIICRWQKFI 266


>AY102657-1|AAM27486.1|  546|Drosophila melanogaster GH05104p
           protein.
          Length = 546

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 155 RPVTESNIQEYISDIVSKYFSPDQPPWQYIIIPCAATEPKYYILVRVHHLLLSGAKSI-- 212
           RP T SN  +YI+ +       ++P    + IP  AT P YY  +   HL + G  S   
Sbjct: 209 RP-TASNPDQYIAALCH-IVKKERPS---VYIPVCATSPAYYDSLARPHLEVLGCASFIP 263

Query: 213 NIGDLLLVEQLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWES 255
            + + L ++   Q  +  ++     P   +   P  + Q++ES
Sbjct: 264 GVQETLQLDDCLQLFQRCEQQQMALPAHVVLTAPRQLQQIYES 306


>AE014297-3460|AAF56237.1|  546|Drosophila melanogaster CG13607-PA
           protein.
          Length = 546

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 155 RPVTESNIQEYISDIVSKYFSPDQPPWQYIIIPCAATEPKYYILVRVHHLLLSGAKSI-- 212
           RP T SN  +YI+ +       ++P    + IP  AT P YY  +   HL + G  S   
Sbjct: 209 RP-TASNPDQYIAALCH-IVKKERPS---VYIPVCATSPAYYDSLARPHLEVLGCASFIP 263

Query: 213 NIGDLLLVEQLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWES 255
            + + L ++   Q  +  ++     P   +   P  + Q++ES
Sbjct: 264 GVQETLQLDDCLQLFQRCEQQQMALPAHVVLTAPRQLQQIYES 306


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.139    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,289,068
Number of Sequences: 52641
Number of extensions: 480937
Number of successful extensions: 1612
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1608
Number of HSP's gapped (non-prelim): 4
length of query: 268
length of database: 24,830,863
effective HSP length: 84
effective length of query: 184
effective length of database: 20,409,019
effective search space: 3755259496
effective search space used: 3755259496
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)