Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002435-TA|BGIBMGA002435-PA|undefined
(488 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 32 1.2
04_01_0457 + 5920047-5920433 32 1.2
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 31 1.6
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 31 2.7
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 30 3.6
08_02_0833 - 21623721-21623821,21624076-21624667 30 3.6
07_01_0917 + 7735696-7735896,7735907-7736404,7736481-7736813,773... 30 3.6
03_01_0280 + 2152000-2153510,2153633-2153732 30 3.6
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 30 3.6
02_01_0511 - 3706123-3706166,3706436-3706492,3706734-3706818,370... 30 4.8
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 6.3
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110... 29 8.3
09_06_0113 + 20938357-20938730,20938820-20939057,20939140-209392... 29 8.3
02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511... 29 8.3
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 421 SKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTSP-KKVSGIPRRSIEQKILS 479
SK+ + P GQ+ DY+S +++ SS N P ++G+ + ++ Q + +
Sbjct: 394 SKDCIEIGEYEPNQKGQTERLDYNSSDVHETSGSSQNLGILPIVGINGVGKTTVAQAVFN 453
Query: 480 TKHVK 484
K VK
Sbjct: 454 NKRVK 458
>04_01_0457 + 5920047-5920433
Length = 128
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 32 EPQLVVASLPVRT-ARLLQRSRTQTPSEGGISDGNASPAPA 71
E VV SL +T AR L+ RT+T SEGG+ +G+ A A
Sbjct: 62 EGNRVVESLMTKTMARTLRLRRTRTSSEGGVGEGDKVKALA 102
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 31.5 bits (68), Expect = 1.6
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 33 PQLVVASLPVRTARLLQRSRTQTPSEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQ 92
PQ V+A +PV+ AR R+R + S+G +S N P ++ Q +V++ + V
Sbjct: 202 PQ-VLADIPVQRARNWARTRVKKNSDGTLSFPN--PEDQAVYQKIVELNAERQASQEVCP 258
Query: 93 ESETLDPLLAACAESPARGNGR 114
+ D L A RG R
Sbjct: 259 QKREDDILTKALGNEEHRGRTR 280
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 209 LHSTMTVLYIAPITPKNF------ITYKDKCTSFVVDTISKTKYFATELSRSEWIATF 260
L+S +LY+API KN+ +Y FV+D+ K ++ + + S W +
Sbjct: 17 LYSKSFLLYLAPIRDKNYSYLMISTSYSSTSVRFVLDSSGKVQFLSWDPGHSLWAVQY 74
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 30.3 bits (65), Expect = 3.6
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 54 QTPSEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETLDPLLAACAESPARGNG 113
QT + I D ++P AS D +++ L +L+ ES+ L+P +AA P + G
Sbjct: 898 QTENMKQIQDALSAPLGASADFDEDELEAELEELEGAELESQLLEP-VAAPPVHPVQVPG 956
Query: 114 RRPPASPLHPDACAE 128
R P P A AE
Sbjct: 957 TRIPTRPAPQKASAE 971
>08_02_0833 - 21623721-21623821,21624076-21624667
Length = 230
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 291 EAQKSKRPVTNGTVKCQCGARQAN-GLANGDDVHTDRRTDSVHLRTNSRVGTKYLQALAG 349
E + P + G VKC + G+ANGD + R H RT V L L+
Sbjct: 149 EEEVRSSPASGGRVKCGSSSVGVGAGIANGDGLEVSREAGCHHQRTRWGVAWIQLTLLSN 208
Query: 350 S 350
S
Sbjct: 209 S 209
>07_01_0917 +
7735696-7735896,7735907-7736404,7736481-7736813,
7736991-7737314,7737367-7737836,7738165-7738447,
7738527-7738640
Length = 740
Score = 30.3 bits (65), Expect = 3.6
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 33 PQLVVASLPVRTARLLQRSRTQTPSEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQ 92
PQ V+A +PV+ AR R+R + S+G +S P ++ Q +V++ + V
Sbjct: 192 PQ-VLADIPVQRARNWARARVKKNSDGTLS--FPIPEDQAVYQKIVELNAERQASQEVCS 248
Query: 93 ESETLDPLLAACAESPARGNGR 114
+ D L+ A RG R
Sbjct: 249 QKREDDILMKALGNEEHRGRTR 270
>03_01_0280 + 2152000-2153510,2153633-2153732
Length = 536
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 160 SHEPRSDDTCNVATQTDRLRPPMSTTLTSSDNSGLVRFIVTSLKT-FIRTLHSTMTVLYI 218
SH + + CN+ RL MST L S ++ G + + K F+R + T VL +
Sbjct: 164 SHFAGTGERCNLQDVFMRLTFDMSTMLASGEDPGCLAISLPMPKVPFVRAVDYTTRVLLV 223
Query: 219 APITP 223
I P
Sbjct: 224 RHIIP 228
>02_05_1276 +
35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 160 SHEPRSDDTCNVATQTDRLRPPMSTTLTSSDNSGLVRFIVTSLKTFIRTLHSTM 213
S + +D + N A+ TD L P T+ SS L R + S TF + LHS++
Sbjct: 233 SPDDTNDTSSNQASNTDGLPKPNMTSKGSSSVVMLARPAIRSDGTFSKKLHSSV 286
>02_01_0511 -
3706123-3706166,3706436-3706492,3706734-3706818,
3707424-3707472,3707566-3707639,3707775-3707849,
3708186-3708240,3708318-3708391,3708607-3708753,
3709419-3709493,3709527-3709648,3709749-3709929
Length = 345
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 276 WNEQASTRKLSSLSSEAQKSKRPVTNGTVKCQC---GARQANGLANGDDV-HTDR 326
W + AS SSLS+ Q+S+ VT GT+ + G L++ D + HT R
Sbjct: 125 WTDHASKSSCSSLSTSTQESEEDVTVGTLLTEAKNSGRSLGKRLSHLDSIPHTPR 179
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 421 SKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTSPKKV 465
+KE+VNG G G +D+ GGY +PS + CS +K+
Sbjct: 448 AKETVNGD----GQKGIDSDSAQIDSGGYSDMPSKL-CSDKRRKI 487
>11_03_0150 +
10810322-10810380,10810530-10810593,10810803-10811047,
10811627-10811747,10811821-10811895,10811986-10812112,
10812194-10812939,10813065-10813195,10813547-10813636,
10814000-10814105
Length = 587
Score = 29.1 bits (62), Expect = 8.3
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Query: 289 SSEAQKSKRPVTNGTVKCQCGARQANGLANGDDVHTDRRTDSVHLRTNSRVGTKYLQALA 348
SS +QKS R T+ VK + Q L+NG + + T S T RV + + +A
Sbjct: 224 SSLSQKSDRESTHSAVKSRAPTGQTARLSNGYGL---KNTLSSQRHTEGRVDSN--RKVA 278
Query: 349 GSTDKRYIKRDSSLGEKSERKPSLYTARSRSI-ENFHNQLTTADRITKQIVIEEMPLVKH 407
G+ +R + D+ R S S++ + ++ A+R + V ++ H
Sbjct: 279 GANRERVVLPDNGRMHSVVRNGSTQATTSKAASQKLPSKAPIANRPPIKSVSDQSLRANH 338
Query: 408 HTSYGDL-YTGRISSKESVNGSRRSPG 433
S L GR S +S S G
Sbjct: 339 SASKQLLSQNGRPQSSQSQRMQSTSHG 365
>09_06_0113 +
20938357-20938730,20938820-20939057,20939140-20939264,
20939682-20939715,20939804-20939850,20939948-20940079,
20940420-20940484,20940613-20940685,20940790-20940946
Length = 414
Score = 29.1 bits (62), Expect = 8.3
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 364 EKSERKPSLYTARSRSIENFHNQLTTADRITKQIVIEEMPLVKHHTSYGDLYTGRISSKE 423
E+S + L + SI+ L+ ADR+T + + + + H TG I S
Sbjct: 293 ERSNSRNPLQPVKVMSIDGLKRALSNADRVTAKSQSQGIRFLSH-------VTGNIESNL 345
Query: 424 SVNGSRRSPGLTGQSTDTDYSSDGGYKSLP 453
S NGS T + + S+ KS+P
Sbjct: 346 SSNGSTNPQ--TSRFSSNKRSTSCSTKSMP 373
>02_05_0924 -
32749682-32750200,32750756-32750959,32751062-32751109,
32751769-32751819,32751907-32752032,32752117-32752257,
32752750-32752971,32753160-32753312,32753536-32753718,
32753964-32754110,32754212-32754319,32754426-32754530,
32754824-32754928,32755243-32755310,32755498-32755576,
32755876-32755935,32756023-32756076,32756168-32756233,
32756701-32756753,32757042-32757096,32757645-32757787,
32758236-32758333,32758436-32758716
Length = 1022
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 419 ISSKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTSPKKVSGIPRRSIEQKIL 478
+ +K+S++ S G + +TD +D S+P + TSPK+ + ++QK+
Sbjct: 804 LQAKDSLSNSIMMQKNAGINHETDNHADQEL-SVPREVPGETSPKEPQSVEIDELKQKVC 862
Query: 479 STKHVKA 485
VKA
Sbjct: 863 ELIEVKA 869
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.126 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,551,507
Number of Sequences: 37544
Number of extensions: 489610
Number of successful extensions: 1194
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1192
Number of HSP's gapped (non-prelim): 14
length of query: 488
length of database: 14,793,348
effective HSP length: 85
effective length of query: 403
effective length of database: 11,602,108
effective search space: 4675649524
effective search space used: 4675649524
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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