GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002435-TA|BGIBMGA002435-PA|undefined
         (488 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   2.0  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   6.0  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   6.0  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    24   8.0  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 195  VRFIVTSLKTFIRTLHSTMTVLYIAPITPKNFITYKDKCTSFVVD-TISKTKYFATELSR 253
            VRF + SL+          TV+    +T  N+    D+  SFV+   + K KY    L  
Sbjct: 936  VRFFMLSLENKPHVFDCYTTVIPHTVLTQYNYTVNTDEKDSFVLGYRLVKKKY---HLYV 992

Query: 254  SEWIATFRDYMNKKMTLAPTSIWNEQASTRKLSSLSSEAQKSKR 297
             +        +NK M  A   +   +  + + + +++EA K+ R
Sbjct: 993  KKSTGPHAVELNKYMKAARQEMSKHRKGSAEWNKINNEAHKTTR 1036


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 447 GGYKSLPSSINCSTSPKKVSGIPRRSIEQKILSTKH 482
           G Y +LP+  N + SP  VS +PR +   ++ + +H
Sbjct: 295 GHYLALPTGENMTQSPSNVS-MPRNASSGELQNGEH 329


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 416 TGRISSKESVNGSRRSPGLTGQSTDTDYSSDGG 448
           T  IS++  VN    SP    +++D D  ++GG
Sbjct: 209 TSNISNRNQVNLPLASPEEESEASDDDSGTEGG 241


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 281 STRKLSSLSSEAQKSKRPVTNGTVKC 306
           S R+LSSL + + +S   + NGT+ C
Sbjct: 32  SPRQLSSLLTLSGESNARIENGTIIC 57


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.126    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,445
Number of Sequences: 2123
Number of extensions: 15872
Number of successful extensions: 52
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 50
Number of HSP's gapped (non-prelim): 4
length of query: 488
length of database: 516,269
effective HSP length: 67
effective length of query: 421
effective length of database: 374,028
effective search space: 157465788
effective search space used: 157465788
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 50 (24.2 bits)