Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002435-TA|BGIBMGA002435-PA|undefined
(488 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 3.2
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 3.2
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 30 3.2
AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical ... 30 3.2
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 30 4.2
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 30 4.2
AL117195-5|CAB55010.1| 571|Caenorhabditis elegans Hypothetical ... 30 4.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 4.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 4.2
Z83731-8|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z83731-7|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical pr... 29 5.6
U01918-1|AAA85278.1| 359|Caenorhabditis elegans dpy-20 protein. 29 5.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 7.4
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 29 7.4
U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily ass... 29 7.4
Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical pr... 29 9.8
AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical ... 29 9.8
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 56 PSEGGISDGNA--SPAPASLLQDVVDIKTLLLQLKRVLQESETL--DPLLAACAESPARG 111
P GG G + SP P + QD +++ L+ KR+ ++ + L D L P R
Sbjct: 234 PDRGGGGSGPSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRV 293
Query: 112 NGRRPPASPLHPDACAEMRRQIIYLQGQ 139
RP P E + +QG+
Sbjct: 294 EWLRPGEITREPQLITEGHSRFDVIQGE 321
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 56 PSEGGISDGNA--SPAPASLLQDVVDIKTLLLQLKRVLQESETL--DPLLAACAESPARG 111
P GG G + SP P + QD +++ L+ KR+ ++ + L D L P R
Sbjct: 259 PDRGGGGSGPSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRV 318
Query: 112 NGRRPPASPLHPDACAEMRRQIIYLQGQ 139
RP P E + +QG+
Sbjct: 319 EWLRPGEITREPQLITEGHSRFDVIQGE 346
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 56 PSEGGISDGNA--SPAPASLLQDVVDIKTLLLQLKRVLQESETL--DPLLAACAESPARG 111
P GG G + SP P + QD +++ L+ KR+ ++ + L D L P R
Sbjct: 280 PDRGGGGSGPSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRV 339
Query: 112 NGRRPPASPLHPDACAEMRRQIIYLQGQ 139
RP P E + +QG+
Sbjct: 340 EWLRPGEITREPQLITEGHSRFDVIQGE 367
>AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical
protein C36C9.1 protein.
Length = 832
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 361 SLGEKSERKPSLYTARSRSIENFHNQLTTADRITKQIVIEEMPLVKHHTSYGDLYTGRIS 420
+ K +R PSL S LT +++ +K + + + ++ + +Y+ +S
Sbjct: 507 AFSSKDQRTPSLSIITSPKALIGEKCLTASNKSSK--IDKSLGMIDSKLTKSPMYSATVS 564
Query: 421 SKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTSP-KKVSGI 468
KE+ +G+R + LT D P SI+C+ P K SGI
Sbjct: 565 GKEATSGNRIARKLT---PGLDGLKSSHCTGNPVSIDCNGCPTPKRSGI 610
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 29.9 bits (64), Expect = 4.2
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 38 ASLPVRTARLLQRSRTQTPSEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETL 97
A+LP T L R + +PS + G +SPA S +V K+ + + + +++
Sbjct: 1401 ATLPSTTPSNLSRMASSSPSSSASNSGTSSPAATSSGISIVKQKSQSIAVSPLARDTRMR 1460
Query: 98 DPLLAACAESPARGNGRRPPASPLHP 123
P + PA + P + P
Sbjct: 1461 SPSPSHLHHRPASSSYTTRPDGVVTP 1486
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.9 bits (64), Expect = 4.2
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 38 ASLPVRTARLLQRSRTQTPSEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETL 97
A+LP T L R + +PS + G +SPA S +V K+ + + + +++
Sbjct: 1401 ATLPSTTPSNLSRMASSSPSSSASNSGTSSPAATSSGISIVKQKSQSIAVSPLARDTRMR 1460
Query: 98 DPLLAACAESPARGNGRRPPASPLHP 123
P + PA + P + P
Sbjct: 1461 SPSPSHLHHRPASSSYTTRPDGVVTP 1486
>AL117195-5|CAB55010.1| 571|Caenorhabditis elegans Hypothetical
protein Y57A10A.5 protein.
Length = 571
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 410 SYGDLYTGRISSKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTS 461
+Y + Y GR S+K+S +RR G S +D S Y + P S S
Sbjct: 263 AYRNAYRGRRSAKDS-RDTRRKSGRKSDSESSDKSDSDEYSTSPKRARASES 313
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 4.2
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 279 QASTRKLSSLSSEAQKSKRPVTNGTVKCQCG-ARQANGL--ANGDDV-HTDRRTDSVHLR 334
Q + RK++ S+A SK +NG+ CG A NG +NG V + SV
Sbjct: 312 QLNKRKMTQAKSDAVDSKSNTSNGSSDSGCGTATSTNGCGSSNGGSVGSAAAKKWSVSDA 371
Query: 335 TNSRVGTKYLQALAGSTDKRYIKRDSSLGEKSERKPSLYTARSRSIENFHNQLTTADRIT 394
T K + L S + + DSS S PS T S N L +R+
Sbjct: 372 TKPMDSPKTHRKLP-SASSLFSQEDSSSSSSSTLTPSKPTTNGTS-SAIPNDL--LERLR 427
Query: 395 KQIVIE 400
I++E
Sbjct: 428 ADIMVE 433
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 4.2
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 279 QASTRKLSSLSSEAQKSKRPVTNGTVKCQCG-ARQANGL--ANGDDV-HTDRRTDSVHLR 334
Q + RK++ S+A SK +NG+ CG A NG +NG V + SV
Sbjct: 298 QLNKRKMTQAKSDAVDSKSNTSNGSSDSGCGTATSTNGCGSSNGGSVGSAAAKKWSVSDA 357
Query: 335 TNSRVGTKYLQALAGSTDKRYIKRDSSLGEKSERKPSLYTARSRSIENFHNQLTTADRIT 394
T K + L S + + DSS S PS T S N L +R+
Sbjct: 358 TKPMDSPKTHRKLP-SASSLFSQEDSSSSSSSTLTPSKPTTNGTS-SAIPNDL--LERLR 413
Query: 395 KQIVIE 400
I++E
Sbjct: 414 ADIMVE 419
>Z83731-8|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 29.5 bits (63), Expect = 5.6
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 362 LGEKSERKPSLYTARSRSIENFHNQLTTADRITKQIVIEEMPLVKHHTSYGDLYTGRISS 421
L S+ + + + + + H + A R T+ EE SY R+S
Sbjct: 1165 LSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMREREEQFFGDIILSYSPGCNARVSG 1224
Query: 422 KESVNGSRRSPGLTGQSTDTDYSSDGGYKSL---PSSINCSTSPKKVSGIPRRSI 473
KE R G ++ D G + L S+N T P+ V+ + R SI
Sbjct: 1225 KEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSI 1279
>Z83731-7|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.5 bits (63), Expect = 5.6
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 362 LGEKSERKPSLYTARSRSIENFHNQLTTADRITKQIVIEEMPLVKHHTSYGDLYTGRISS 421
L S+ + + + + + H + A R T+ EE SY R+S
Sbjct: 1291 LSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMREREEQFFGDIILSYSPGCNARVSG 1350
Query: 422 KESVNGSRRSPGLTGQSTDTDYSSDGGYKSL---PSSINCSTSPKKVSGIPRRSI 473
KE R G ++ D G + L S+N T P+ V+ + R SI
Sbjct: 1351 KEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSI 1405
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 29.5 bits (63), Expect = 5.6
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 362 LGEKSERKPSLYTARSRSIENFHNQLTTADRITKQIVIEEMPLVKHHTSYGDLYTGRISS 421
L S+ + + + + + H + A R T+ EE SY R+S
Sbjct: 1165 LSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMREREEQFFGDIILSYSPGCNARVSG 1224
Query: 422 KESVNGSRRSPGLTGQSTDTDYSSDGGYKSL---PSSINCSTSPKKVSGIPRRSI 473
KE R G ++ D G + L S+N T P+ V+ + R SI
Sbjct: 1225 KEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSI 1279
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.5 bits (63), Expect = 5.6
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 362 LGEKSERKPSLYTARSRSIENFHNQLTTADRITKQIVIEEMPLVKHHTSYGDLYTGRISS 421
L S+ + + + + + H + A R T+ EE SY R+S
Sbjct: 1291 LSNDSDIDAAFIAKKCQGLTDDHQPVDVASRTTRMREREEQFFGDIILSYSPGCNARVSG 1350
Query: 422 KESVNGSRRSPGLTGQSTDTDYSSDGGYKSL---PSSINCSTSPKKVSGIPRRSI 473
KE R G ++ D G + L S+N T P+ V+ + R SI
Sbjct: 1351 KEIKQLIRHDQGAVQKAAPLQSMEDFGDEILAHAADSVNIQTPPEVVATVQRVSI 1405
>Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical
protein T22B3.1 protein.
Length = 440
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 421 SKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTSPKKV 465
SKES NG P L G ++ + S G SS++CS SP+ +
Sbjct: 89 SKESSNGILSDPSLHGSNSSSSTSDVG------SSVDCSISPEPI 127
>U01918-1|AAA85278.1| 359|Caenorhabditis elegans dpy-20 protein.
Length = 359
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 421 SKESVNGSRRSPGLTGQSTDTDYSSDGGYKSLPSSINCSTSPKKV 465
SKES NG P L G ++ + S G SS++CS SP+ +
Sbjct: 89 SKESSNGILSDPSLHGSNSSSSTSDVG------SSVDCSISPEPI 127
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 7.4
Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 1/136 (0%)
Query: 168 TCNVATQTDRLRPPMSTTLTSSDNSGLVRFIVTSLKTFIRTLHSTMTVLYIAPITPKNFI 227
T T T P +TT T + + T++ T T +T T P T
Sbjct: 183 TTTTTTPTTTTTAPTTTTTTPTTTT-TTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP 241
Query: 228 TYKDKCTSFVVDTISKTKYFATELSRSEWIATFRDYMNKKMTLAPTSIWNEQASTRKLSS 287
T + +T + T T+ + T T PT+ +T+ ++
Sbjct: 242 TTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTT 301
Query: 288 LSSEAQKSKRPVTNGT 303
+ + + P T T
Sbjct: 302 TTKTTKTTSTPTTTTT 317
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 29.1 bits (62), Expect = 7.4
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 49 QRSRTQTP--SEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETLDPLL-AACA 105
+R Q+P SEG S+ + SP PA ++D+ L V+ + L L+ A
Sbjct: 187 RRRERQSPVYSEGTSSEKSISPPPAKKIKDMAP----ALPDYSVISKPNLLQSLIFPMIA 242
Query: 106 ESPARGNG-RRPPASPLHPDACAEM 129
E P+ PP P +PD +M
Sbjct: 243 EQPSTSQSPPAPPVFPFNPDLQMQM 267
>U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform b protein.
Length = 256
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 90 VLQESETLDPLLAACAESPARGNGRRPPASPLHPDA 125
V ++L P A + S R NGR P PLH D+
Sbjct: 31 VYSSRKSLGPPSQAQSYSDVRSNGRSPSRDPLHSDS 66
>Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 28.7 bits (61), Expect = 9.8
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 291 EAQKSKRPVTNGTVKC-QCGARQANGLANGDDVHTDRRTDSVHLRTNSRVGTKYLQALAG 349
E+ K+ V NG +KC CGA L++ D T T H R++ + A G
Sbjct: 63 ESNKAMNDVLNGKMKCTTCGATSVGLLSDCHDSATSTTTTVSH-RSSEEPPRRKPSAAGG 121
Query: 350 STDKRYIKRDSSLGEKSERKPS 371
D ++ SS+ +S R S
Sbjct: 122 DHDDEELE-CSSIESRSIRSVS 142
>AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 28.7 bits (61), Expect = 9.8
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 291 EAQKSKRPVTNGTVKC-QCGARQANGLANGDDVHTDRRTDSVHLRTNSRVGTKYLQALAG 349
E+ K+ V NG +KC CGA L++ D T T H R++ + A G
Sbjct: 63 ESNKAMNDVLNGKMKCTTCGATSVGLLSDCHDSATSTTTTVSH-RSSEEPPRRKPSAAGG 121
Query: 350 STDKRYIKRDSSLGEKSERKPS 371
D ++ SS+ +S R S
Sbjct: 122 DHDDEELE-CSSIESRSIRSVS 142
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.126 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,500,069
Number of Sequences: 27539
Number of extensions: 411215
Number of successful extensions: 1148
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1143
Number of HSP's gapped (non-prelim): 22
length of query: 488
length of database: 12,573,161
effective HSP length: 84
effective length of query: 404
effective length of database: 10,259,885
effective search space: 4144993540
effective search space used: 4144993540
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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