GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002435-TA|BGIBMGA002435-PA|undefined
         (488 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   1.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   7.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   7.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   7.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 51  SRTQTPSEGGISDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETLD 98
           S+T   S   +SD + S +   L QD+++++T +      +  SE  D
Sbjct: 338 SKTAMNSNQIVSDNSLSSSEEKLKQDILNLRTDISSSSSSISSSEEND 385


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 264 MNKKMTLAPTSIWNEQASTRKLSSLSSEAQKSKRPVTNGTVKCQCG 309
           +N K  L P  IW+   +T    S+  +A +  + + N TV    G
Sbjct: 464 LNSKDPLDPPVIWSNDLATEHDRSVMIQAIRVVQKLVNTTVMRDLG 509


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 189 SDNSGLVRFIVTSLKTFIRTLHST 212
           SD  GL   ++  +KT  + LH T
Sbjct: 137 SDRPGLEHIVIGIVKTVAKKLHGT 160


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 326 RRTDSVHLRTNSRVGTKYLQALAGSTDKRYIKRDSSL---GEKSERKPSLYTARSRS 379
           RRTDS+  + ++     +L + + S+   Y K D  L    +  +R PS+   +  S
Sbjct: 76  RRTDSMDSQNSASTYNSFLSSDSASSGNVYCKCDDCLLGIVDDYQRNPSVVGRKKSS 132


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 189 SDNSGLVRFIVTSLKTFIRTLHST 212
           SD  GL   ++  +KT  + LH T
Sbjct: 137 SDRPGLEHIVIGIVKTVAKKLHGT 160


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.126    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,768
Number of Sequences: 429
Number of extensions: 4682
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 488
length of database: 140,377
effective HSP length: 60
effective length of query: 428
effective length of database: 114,637
effective search space: 49064636
effective search space used: 49064636
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)