Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002434-TA|BGIBMGA002434-PA|undefined
(133 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 0.74
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 27 0.98
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 27 1.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.3
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 1.3
SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 25 3.0
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 3.0
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 25 3.0
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 4.0
SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT |Schizosa... 25 4.0
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 25 5.2
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 25 5.2
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 5.2
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 24 6.9
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 24 6.9
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 6.9
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 24 9.1
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.5 bits (58), Expect = 0.74
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 27 SLDERQLQQELSSSKSAVRQWSQ-LLEQSNMLDRQLAAISQGISAPDSLTASNNSLTSIG 85
SLD+ + Q L + K + Q S+ LL+++N L+ + G+S+ + + ++L +
Sbjct: 924 SLDDHNIDQTLVNKKETLAQDSESLLQKNNALNEKGFENQFGLSSSAAKVLNKDTLDHVS 983
Query: 86 TMNKRHVDSSDK 97
V SS K
Sbjct: 984 GPISNSVSSSFK 995
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 0.98
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 78 NNSLTSIGTMNKRHVD----SSDKRQRIDANTRIQWRIYNNKKPIRQRFQ 123
NNSLTS + HV+ S DK I + + Q Y+NK P + Q
Sbjct: 36 NNSLTSSTHSSTDHVNVLPISQDKEMDISSPVKKQKASYSNKSPNKAPIQ 85
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 1.3
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 25 LNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLD----RQLAAISQGISAPDSLTASNNS 80
+NS + E+S+ A+ W QL+EQ L+ +LA +++ I A A N
Sbjct: 1 MNSFSSNEYSTEISTE--ALNNWQQLVEQRISLELEYAAKLAKLTKSIKAIKQ-CAPLND 57
Query: 81 LT-----SIGTMNKRHVDSS 95
LT + NK+H+++S
Sbjct: 58 LTKQVCVELMQCNKKHLEAS 77
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 1.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 10 NSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGIS 69
++ S + SS S ++S SSS S+ R S S++ + ++ S+ S
Sbjct: 357 STTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSS 416
Query: 70 APDSLTASNNSLTS 83
AP S +NS +S
Sbjct: 417 APVSSAFYHNSTSS 430
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 1.3
Identities = 24/124 (19%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 10 NSNSLHRLDSSLRSGLNSLDERQL-QQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGI 68
++ ++ R+ SS S ++ +E+Q + ++ + +++ + LL+ R+ Q +
Sbjct: 267 HNKAVKRMQSSSPSTTSNTNEKQKGPKAIARIEFLIKKLTSLLDDVRKDTRENVVRRQTL 326
Query: 69 SAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNNKKPIRQRFQGEPLP 128
+A + L + + V S + Q +++ + +IYN K + + G+P+P
Sbjct: 327 TAAERLAEVEAAEREAFEQSTPSV-SVEGNQDEESDQDDEEKIYNPLK-LPLGWDGKPIP 384
Query: 129 FQIW 132
F +W
Sbjct: 385 FWLW 388
>SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 3.0
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 15 HRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQL-LEQSNMLDRQLAAISQGISAPD- 72
HR L NS D L +L KS +++W+ +E+ L R +A I A +
Sbjct: 32 HRYPRFLLRAYNSFDGIYLLVKLLLEKSQLKKWNATSVERRFQLKRVIAVRDSSIIAEEF 91
Query: 73 -SLTASNNSLTSIGTMNK 89
+ S SL I + K
Sbjct: 92 PQESESATSLNGIDVLKK 109
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 3.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 9 VNSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSN 55
V+S+ R +L + LNS + ++Q+E+S KS +R + SN
Sbjct: 271 VSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSELRDLEKSGGSSN 317
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 3.0
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 14 LHRLDSSLRSG-LNSLDERQLQQELSSSKSAVRQWSQL 50
LH +S+L G +N+ E + + +SSS +A WS L
Sbjct: 46 LHVSESALLPGQVNTYFENRYSKTVSSSLTAANTWSHL 83
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.0 bits (52), Expect = 4.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 26 NSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQL 61
+S E+QLQ K V + + L EQ+N DRQL
Sbjct: 474 SSAQEKQLQM-----KETVNKLTSLQEQNNEFDRQL 504
>SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 4.0
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 3 MMMIMVVNSNSLHRLDSSLRSGLNSLDERQLQQELSSS 40
++ + V NS +LD+ +RS +NS + +Q + S+
Sbjct: 452 LIALAVFNSPIRSKLDNKIRSRVNSYKLKSYEQSMKST 489
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 24.6 bits (51), Expect = 5.2
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 11 SNSLHRLDSSLRSGLNSLDERQLQQ----ELSSSKSAVRQWSQLLEQSNMLDRQLAAISQ 66
SN ++++ SG+ D R+ ++ E + ++ L+ LD+Q A+S
Sbjct: 394 SNVYDESNATISSGVMQKDLRKTEEIGSAEAMEGEEQEPSLAERLQNLTKLDQQAQALST 453
Query: 67 GISAPDSLT 75
ISA SL+
Sbjct: 454 QISASTSLS 462
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 24.6 bits (51), Expect = 5.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 23 SGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQ 66
SG+ +L+ L+Q+ + RQ Q+ + N+L R+ + I +
Sbjct: 107 SGIENLENVLLEQKEQLQQLEKRQTDQVSARENILQRETSEIQR 150
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 24.6 bits (51), Expect = 5.2
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 15 HRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSL 74
H L++ RS + + + + L K+A + ++ E SN+L R ++ D+L
Sbjct: 545 HELETMHRSQRDKQESTERELRLLQEKAASLERNKSSEVSNLLSRYNTEVAH---LEDAL 601
Query: 75 TASNNSLTSIG 85
+ + L ++G
Sbjct: 602 HSKDRELANLG 612
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 24.2 bits (50), Expect = 6.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 69 SAPDSLTASNNSLTSIGTMNKRHVDSSDKRQR 100
S+PD T ++ +T +NK D + KR+R
Sbjct: 11 SSPDIFTDDDDMITIEPELNKNPKDCNSKRKR 42
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 24.2 bits (50), Expect = 6.9
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 71 PDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNNKKPI 118
P + +N T G+ + K+ R DA QW+ N K P+
Sbjct: 30 PTTSNVNNTQSTGRGSSGTSTEHGTFKKGRNDAPDVPQWKQVNAKNPV 77
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 24.2 bits (50), Expect = 6.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 64 ISQGISAPDSLTASNNSLTSIGTMNKRHVDSSD 96
+S I +P S ++S++S ++++H DS D
Sbjct: 86 VSPHIPSPSSFSSSSSSDLDKSMLDEKHPDSED 118
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 23.8 bits (49), Expect = 9.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 43 AVRQWSQLLEQSNMLDRQLAAISQG 67
AVR+W + L+ +L LA +QG
Sbjct: 268 AVREWEKTLDSGEILWPSLAITAQG 292
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.125 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,304
Number of Sequences: 5004
Number of extensions: 19494
Number of successful extensions: 102
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 90
Number of HSP's gapped (non-prelim): 19
length of query: 133
length of database: 2,362,478
effective HSP length: 66
effective length of query: 67
effective length of database: 2,032,214
effective search space: 136158338
effective search space used: 136158338
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)
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