Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002434-TA|BGIBMGA002434-PA|undefined
(133 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0616 - 21246374-21246462,21246605-21247702,21247800-212481... 31 0.31
03_06_0205 - 32347636-32347646,32347762-32347801,32347959-323480... 31 0.31
03_01_0612 - 4501595-4501619,4501752-4501906,4502051-4502092,450... 31 0.41
02_05_0828 + 32057670-32057851,32060054-32060132,32060808-320608... 29 0.94
04_04_1318 + 32608441-32608833,32608953-32608997,32609092-326091... 29 1.2
04_03_0517 + 16712487-16712570,16713715-16714059,16714149-167143... 29 1.2
11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495 28 2.2
02_01_0033 + 202703-202705,203397-203458,203566-203665,203875-20... 28 2.2
12_01_0272 + 1985348-1986036,1986142-1988020 27 3.8
11_01_0271 + 2039100-2041760 27 3.8
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 27 3.8
07_03_0487 - 18663890-18663964,18664286-18664441,18664693-186652... 27 3.8
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 27 3.8
02_04_0328 + 22076321-22077835 27 3.8
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 27 3.8
01_01_0769 - 5944910-5946613,5946768-5946887,5948243-5948300,594... 27 3.8
11_01_0107 - 801148-803633,803727-803860,803990-804006,804321-80... 27 5.0
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 27 5.0
04_01_0027 - 360909-360926,361588-361644,361765-361854,361953-36... 27 5.0
12_02_0003 + 12149032-12149562,12149662-12149732,12150160-12150421 27 6.6
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 6.6
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 27 6.6
03_05_0617 + 26163161-26163595,26163678-26164202 27 6.6
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 27 6.6
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314 26 8.7
08_02_1245 - 25557201-25558199 26 8.7
>12_02_0616 -
21246374-21246462,21246605-21247702,21247800-21248110,
21248550-21249251,21252802-21252912,21253396-21253481,
21253753-21253862,21254085-21254236,21254656-21254765
Length = 922
Score = 31.1 bits (67), Expect = 0.31
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 62 AAISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANT 105
+A+ + I A DS T S+N+L +G +++ D+S ++I ++T
Sbjct: 217 SALEEHIHADDSNTISDNTLEQLGFLDQESNDASVNTEKIQSST 260
>03_06_0205 -
32347636-32347646,32347762-32347801,32347959-32348060,
32348473-32348599,32348893-32350835,32351347-32351367
Length = 747
Score = 31.1 bits (67), Expect = 0.31
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 23 SGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGI--SAPDSLTASNNS 80
SGL ER+L +++S + S + W + Q + L A+S+ + S +S + +
Sbjct: 206 SGLQEEMERKLYEQISMTNSMSKNWQDAIAQFASMRDDLGALSKLLLPSLQESHISHSKH 265
Query: 81 LTSIGTMNKRHVDSSDKRQRIDANTRIQ 108
TS N+ + K+ + D ++R +
Sbjct: 266 ETSSNRSNRWKYNIFGKKNKEDHSSRAE 293
>03_01_0612 -
4501595-4501619,4501752-4501906,4502051-4502092,
4502238-4502279,4502365-4502464,4502825-4502889,
4503140-4503217
Length = 168
Score = 30.7 bits (66), Expect = 0.41
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 9 VNSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQ 66
+N L L+ SL SGL S+ + + ++ L R+ QL+E++ L Q++ +S+
Sbjct: 58 LNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQVSRMSR 115
>02_05_0828 +
32057670-32057851,32060054-32060132,32060808-32060869,
32060993-32061092,32061169-32061210,32062057-32062098,
32062189-32062343,32063609-32063636
Length = 229
Score = 29.5 bits (63), Expect = 0.94
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 12 NSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQG-ISA 70
+ L +L+ +L +GL+ + + QQ + R+ SQL E++ L Q++ IS
Sbjct: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180
Query: 71 PDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDAN 104
D+ +S M H SS + D +
Sbjct: 181 VDTENFVTEGQSSESVMTALHSGSSQSQDNDDGS 214
>04_04_1318 +
32608441-32608833,32608953-32608997,32609092-32609130,
32609382-32609552,32610042-32610194,32610362-32610397,
32611123-32611184,32611590-32611680,32611767-32611808,
32611904-32612012,32612161-32612275,32612354-32612403,
32612577-32612655,32612763-32612813,32612966-32613107,
32613315-32613359,32613634-32613741,32613843-32613884,
32614388-32614570,32614932-32615135
Length = 719
Score = 29.1 bits (62), Expect = 1.2
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 14 LHRLDSSLRSGLNSLDERQL----QQELSSSKSAVRQWSQ--LLEQSNML-DRQLAAISQ 66
+ RL+S L L + E+ L Q+E SSK A++Q L EQ + D L I++
Sbjct: 532 IDRLESLLTESLRARTEQSLTRDQQEETDSSKFAIKQVLSFTLTEQGAFVKDLLLQEIAK 591
Query: 67 GISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDA-NTRIQWRIYNNKKPIRQRFQGE 125
G+ A + T S+ + + + S DA N R R+ + Q+
Sbjct: 592 GLDALGAATLSSATSAAASRLPFAVPSPSPSLDNEDATNLRNLHRLLLLLSKVPQKEDSS 651
Query: 126 PLP 128
P+P
Sbjct: 652 PIP 654
>04_03_0517 +
16712487-16712570,16713715-16714059,16714149-16714301,
16714889-16714972,16715426-16715479,16715552-16715647,
16716163-16716258,16716941-16717086,16717650-16717799,
16717889-16718018,16718128-16718787,16718881-16718979,
16719058-16719210,16719323-16720054,16720338-16720640
Length = 1094
Score = 29.1 bits (62), Expect = 1.2
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 26 NSLDERQLQQELSSSKSAVRQWSQLLEQ--SNMLDRQLAAISQGISAPDSLTASNNSLTS 83
N++ Q +++++ + +RQ L + S D + S G +A SL SL+
Sbjct: 424 NAVVNEQKEEDVNMLREQIRQLKDELHRMKSGGSDGSNGSFSTGWNARRSLHLLKMSLSR 483
Query: 84 IGTMNKRHVDSSDKRQRIDAN 104
T H DS D ID N
Sbjct: 484 PTTFQTIHEDSGDVEMEIDEN 504
>11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495
Length = 1086
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 MTMMMIMVVNSNSLHR-LDSSLRSGLN----SLDERQLQQELSSSKSAVRQWSQLLEQSN 55
+T +M++ ++ N H + S+ +N L L + S+ ++ +L QSN
Sbjct: 491 LTGLMVLALSDNQFHSTIPESIMEMVNLRWLDLSGNSLAGSVPSNAGMLKNAEKLFLQSN 550
Query: 56 MLDRQLAAISQGISAPDSLTASNNSLTSIGTMNKRHVDS 94
L + ++ + L SNN L+S + H+ S
Sbjct: 551 KLSGSIPKDMGNLTKLEHLVLSNNQLSSTVPPSIFHLSS 589
>02_01_0033 +
202703-202705,203397-203458,203566-203665,203875-203916,
204264-204305,204437-204589,206559-207221
Length = 354
Score = 28.3 bits (60), Expect = 2.2
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 12 NSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQ------SNMLDRQLAAIS 65
+ +HR + G+ D+R++ +++ + +A Q ++L++ + LDRQ A
Sbjct: 105 DDVHRHEDYSGGGVRDDDDRRMMEDVETDLAAANQAGKVLKKGKKKQAKDELDRQKQAEK 164
Query: 66 QGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRID 102
+ +L NS I + K+ +++QR+D
Sbjct: 165 KRRRLEKALA---NSAAIISELEKKKQKKREEQQRLD 198
>12_01_0272 + 1985348-1986036,1986142-1988020
Length = 855
Score = 27.5 bits (58), Expect = 3.8
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 14 LHRLDSSLRS--GLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAP 71
LHR +L+ L+ L++R QQ+++ S LL++S M L ++ ++
Sbjct: 290 LHRAGETLQKCLKLDELEQRN-QQQITLSNQGNGDAYLLLKKSRMYLLLLGILAASVTYQ 348
Query: 72 DSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNN 114
L S GT RH + D I + R Y+N
Sbjct: 349 AGLNPPGGFWQSDGTDGYRHYLAGDPVLHITYHRRYMVFFYSN 391
>11_01_0271 + 2039100-2041760
Length = 886
Score = 27.5 bits (58), Expect = 3.8
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 14 LHRLDSSLRS--GLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAP 71
LHR +L+ L+ L++R QQ+++ S LL++S M L ++ ++
Sbjct: 325 LHRAGETLQKCLKLDELEQRN-QQQITLSNQGNGDAYLLLKKSRMYLLLLGILAASVTYQ 383
Query: 72 DSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNN 114
L S GT RH + D I + R Y+N
Sbjct: 384 AGLNPPGGFWQSDGTDGYRHYLAGDPVLHITYHRRYMVFFYSN 426
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 27.5 bits (58), Expect = 3.8
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 4 MMIMVVNSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNM-LDRQLA 62
+M+ + NS SL S + SLDE + + +++AV SQ LE+ + L+ +
Sbjct: 190 LMLYITNSYSL--FISGDDDSVASLDEEYSSKARAHAQAAVEA-SQALEKEALDLESKRT 246
Query: 63 AISQGISAPDSLTASNNSLTS 83
++ G S ++L A +LT+
Sbjct: 247 KLTSGPSRLEALQAEKEALTA 267
>07_03_0487 -
18663890-18663964,18664286-18664441,18664693-18665295,
18665566-18665894,18665992-18666504,18667128-18667242,
18667326-18667397,18667480-18667644,18668604-18668752,
18668830-18668899,18668975-18669121,18669199-18669267,
18669366-18669416,18669537-18669629,18670122-18670211
Length = 898
Score = 27.5 bits (58), Expect = 3.8
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 26 NSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTASNNSLTSIG 85
N+L Q Q SS+++ V Q S+ + +N +D + +S + L+ SNN TS+
Sbjct: 445 NALSANQQGQVSSSAQNTVDQGSRSVT-TNGVDNVDSLVSASTQLQNELSDSNNGRTSLN 503
Query: 86 TMN 88
+
Sbjct: 504 AQS 506
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 27.5 bits (58), Expect = 3.8
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 3 MMMIMVVNSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQL---LEQSNMLDR 59
M + V +N+ H DS +S R ++ SS +S+V+ S ++Q + +D+
Sbjct: 566 MELSEVRGTNTEH--DSRTQSYHQEDRRRYIENRASSLQSSVKTTSDTRTQVDQHDEVDQ 623
Query: 60 QLAAISQGISAPDSLT------ASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYN 113
Q+ A++ + LT SN S TS+ N V+ D R ++ I +
Sbjct: 624 QVVALTDSRRRSEKLTDIKMDSTSNVSRTSLKQRNSDEVNQMDIDDRSNSVHNITHITRD 683
Query: 114 NKKPIRQR 121
K+ + Q+
Sbjct: 684 KKRYVNQQ 691
>02_04_0328 + 22076321-22077835
Length = 504
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 31 RQLQQELSSSKSAVRQWSQLLEQSNMLDRQL 61
++LQQ++S+ +S WS+++ Q LDR+L
Sbjct: 316 KRLQQKMSAKESDT--WSKVIRQEEALDRRL 344
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 27.5 bits (58), Expect = 3.8
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Query: 19 SSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAA 63
S L N+L R+LQ+ + W QLL + NMLD LAA
Sbjct: 401 SKLDKAKNALVRRELQR-------LKQDWIQLLSRFNMLDEHLAA 438
>01_01_0769 -
5944910-5946613,5946768-5946887,5948243-5948300,
5948544-5948627,5949356-5949456,5949562-5949745,
5950746-5950774,5951134-5951226
Length = 790
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 64 ISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTR 106
+SQ P + A N LT G ++K HVD+ +K R D N +
Sbjct: 392 VSQRPEEPSQMLA--NHLT--GAIDKTHVDTDEKNARSDINEK 430
>11_01_0107 -
801148-803633,803727-803860,803990-804006,804321-804504,
804819-804883
Length = 961
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 65 SQGISAPDSLTASNNSLTSIGTMNKRHVDSSDK 97
++GI+ D +T SN+SL S+ + D ++K
Sbjct: 229 TEGINDEDKVTVSNSSLDSVRKVENVETDGNEK 261
>05_06_0166 +
26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 47 WSQLLEQS-NMLDRQLAAISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANT 105
WS++ + + LD + S G+S P S +A+ S+ + + H+D S
Sbjct: 228 WSRIHHRGKSFLDMAGRSFSCGLSDPKSASAARRSIAATSAGSCGHMDGSRSHPHFPVTA 287
Query: 106 RI 107
R+
Sbjct: 288 RL 289
>04_01_0027 -
360909-360926,361588-361644,361765-361854,361953-362038,
362159-362219,362310-362480,362555-362701,362773-362910
Length = 255
Score = 27.1 bits (57), Expect = 5.0
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 21 LRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTASNNS 80
LR LN +Q+E++ K ++ + +++ ++ L+ + +G+ A D L N
Sbjct: 125 LRPRLNQPFFDYIQREIAQIKFSITRTAEMEDRLIELEAMQKVLLEGVEAYDKL---QND 181
Query: 81 LTSIGTMNKRHVDSSDKRQRI 101
L S + + SSDK+ +
Sbjct: 182 LVSAKERLTKILQSSDKKSTL 202
>12_02_0003 + 12149032-12149562,12149662-12149732,12150160-12150421
Length = 287
Score = 26.6 bits (56), Expect = 6.6
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 9 VNSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGI 68
+ +N++ R R G+ L + Q + E VR+ L+ Q N RQ S+ +
Sbjct: 148 METNAISRTRGMERQGIPQLQDIQEKNEALQMGRIVRRHQHLISQGNHTPRQ---FSKSM 204
Query: 69 SAPDSLTASNNSL 81
++ T++ N L
Sbjct: 205 IPYEASTSNTNDL 217
>06_01_1032 +
8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 26.6 bits (56), Expect = 6.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 60 QLAAISQGISAPDSL----TASNNSLTSIGTMNKRHVDSSDKRQRID 102
Q + S G+ +P SL T S NS S+ + K SS KR+R+D
Sbjct: 161 QKSGRSSGMESPASLQIEDTRSMNSHDSLKSDEKTSKKSSSKRKRVD 207
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 26.6 bits (56), Expect = 6.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 34 QQELSSSKSAVRQWSQLLEQSNMLDRQLAA 63
+++L++ K A + L+EQ NML ++L A
Sbjct: 422 EEDLNNDKIASSEMETLIEQKNMLAKELEA 451
>03_05_0617 + 26163161-26163595,26163678-26164202
Length = 319
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 43 AVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTASNNSLTSIGTMN 88
A + W++L EQ RQ+ A + +A L A + + IG +N
Sbjct: 146 AAKMWAELAEQRGRHARQMVATVEA-AAARRLRAKDEEIERIGRLN 190
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 26.6 bits (56), Expect = 6.6
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 18 DSSLRSGLNSLDERQLQQELSSSKSAVRQ-WSQLLEQSNMLDRQLAAISQGISAPDSLTA 76
D +L NSL E QLQQ L + V Q ++E S + R ++S + P A
Sbjct: 768 DDTLVEPANSLAEPQLQQPLDNGLIDVNQLLESVVETSRHVGR--LSVSTNLDLPFKEVA 825
Query: 77 SNNSLTSIGTMNKRHVDSSDKRQRI 101
+ IG K V S ++++
Sbjct: 826 NRCEALLIGKQQKLSVCMSVHQKQV 850
>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
Length = 1056
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 34 QQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTASNNSLT 82
Q E+ SS + Q +QLL N L+ ++ A +S S+ S+N L+
Sbjct: 442 QGEIPSSIGNMTQLNQLLLSGNYLEGRIPATIGNLSKLTSMDLSSNLLS 490
>08_02_1245 - 25557201-25558199
Length = 332
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 17 LDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQ 66
++SS+ +G +DER ++ + K VR W L + M + AAI +
Sbjct: 275 VNSSVVAGRVGVDERPMKNSVFFRKGKVRDWKNYLTE-EMAKKLDAAIEE 323
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.125 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,268,950
Number of Sequences: 37544
Number of extensions: 105966
Number of successful extensions: 462
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 453
Number of HSP's gapped (non-prelim): 27
length of query: 133
length of database: 14,793,348
effective HSP length: 75
effective length of query: 58
effective length of database: 11,977,548
effective search space: 694697784
effective search space used: 694697784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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