Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002434-TA|BGIBMGA002434-PA|undefined
(133 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 33 0.10
SB_12899| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 28 2.2
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 28 2.2
SB_53733| Best HMM Match : DUF823 (HMM E-Value=0.31) 28 2.9
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4) 27 5.1
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 27 6.8
SB_53599| Best HMM Match : bZIP_1 (HMM E-Value=4) 27 6.8
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 27 6.8
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 27 6.8
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_24296| Best HMM Match : Pox_A32 (HMM E-Value=1) 26 9.0
SB_22061| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_17672| Best HMM Match : ERM (HMM E-Value=0.13) 26 9.0
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 26 9.0
SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031) 26 9.0
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 26 9.0
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 32.7 bits (71), Expect = 0.10
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 4 MMIMVVNSNSLHR---------LDSSLRSGL-NSLDERQLQQELSSSKSAVRQWSQLLEQ 53
MM+M++ SN L+R ++S+ GL N ++++Q Q+ + + A S LLE
Sbjct: 1197 MMVMILLSNPLYRDPRFQSTKSYEASMAEGLDNDMNQQQQQESVPHGQEAFHTPSLLLEN 1256
Query: 54 SNMLDRQLAAISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDAN 104
S+ LD A ++Q AP + + +N V + R D+N
Sbjct: 1257 SS-LDASSAPVTQQ-QAPLAQSGANQGQKKKSAFQITSVTETRAHSRGDSN 1305
>SB_12899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 30.3 bits (65), Expect = 0.55
Identities = 20/92 (21%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 21 LRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTASNNS 80
L++ LN++ + +++ ++ A+ W ++ + ++ + A+ G P + S+++
Sbjct: 451 LQTPLNAVSDDDIERLIAWEDEALTGWHRVKKSRDLEICRGQAVDGG---PPIIKVSSHT 507
Query: 81 --LTSIGTMNKRHVDSSDKRQRI-DANTRIQW 109
+ SI TM RH+ R+RI + + R++W
Sbjct: 508 YGVLSIATMTLRHISYDQARRRIMNWDVRMEW 539
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 18 DSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQS----NMLDRQLAAISQGISAPDS 73
+SS + D +L+++L + V+Q+ LEQ+ L+R+L++ S+ I +
Sbjct: 1088 ESSTNIQVTETDPIKLREKLQEALIEVQQYKVKLEQAMQDKEKLERKLSSFSEDIKQIND 1147
Query: 74 LTASNNSL 81
L A N L
Sbjct: 1148 LKAENQRL 1155
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 60 QLAAISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNNKKPIR 119
+L +I+ + AP S T+ +S++ +M+K + KR+R + R + R + +K I
Sbjct: 165 KLPSIASQLKAPSSRTSRRHSISKRNSMDKHSEEYRQKRERNNVAVR-KSRFKSKQKFIE 223
Query: 120 QRFQGEPL 127
+ + E L
Sbjct: 224 TQSRVEEL 231
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 28.3 bits (60), Expect = 2.2
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Query: 10 NSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGIS 69
NS+S HR S + +S+D+ K + R WS+ E+ + L R+ ++
Sbjct: 276 NSSSHHRSSSREKDRKSSMDKSIRSSSRDRDKKSRRSWSKSKERDSKL-REKTMVAPS-K 333
Query: 70 APDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNNKKPIRQRFQGE 125
+PD +S +S + DSS +R+ + + R + + RQ E
Sbjct: 334 SPD--RSSKRRSSSRDESARERPDSSYRRRSKSKSPDRRSRKFEEQTSHRQSMSRE 387
>SB_53733| Best HMM Match : DUF823 (HMM E-Value=0.31)
Length = 425
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 29 DERQLQQELSSSKSAVR-QWSQLL--EQSNMLDRQLAAISQGISAPDSLTA-----SNNS 80
DER +++ +K V Q SQ + +++ M AAISQGI +P++ A + +
Sbjct: 289 DERSMEKLAMLAKHRVATQQSQYICSDRARMATSASAAISQGIKSPETHEAETPPTTTCA 348
Query: 81 LTSIGTMN 88
L +GT+N
Sbjct: 349 LVPVGTIN 356
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 3.9
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 10 NSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGIS 69
NSN+ SS S NS SSS S+ S S+ ++ S S
Sbjct: 54 NSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSS 113
Query: 70 APDSLTASNNSLTSIGTMNKRHVDSS 95
+ S ++S++S +S + + SS
Sbjct: 114 SSSSSSSSSSSSSSSSSSSSSSSSSS 139
Score = 26.2 bits (55), Expect = 9.0
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 10 NSNSLHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGIS 69
+S+S SS S +S SSS S+ S S+ ++ S S
Sbjct: 168 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSS 227
Query: 70 APDSLTASNNSLTSIGTMNKRHVDSS 95
+ S ++SNNS +S + + SS
Sbjct: 228 SSSSSSSSNNSSSSSSSSSSSSSSSS 253
>SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4)
Length = 617
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 17 LDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTA 76
LD+ +++ S D ++EL S + V++ + L + LD ++ +SQ + D+L
Sbjct: 90 LDAEIKNSWES-DFMNARKELGSPE--VQRRNSLERELERLDNDMSLLSQISALSDTLNI 146
Query: 77 SNNSLTSIGTMNKR 90
S+ + S+ + R
Sbjct: 147 SHQPIASLSVCSSR 160
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 26.6 bits (56), Expect = 6.8
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 9 VNSNSLHRLDSSLRSGLNSLDE--RQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQ 66
+ + L+ SL L L + RQL+ +L++ V Q Q+ + ML++QLA +S
Sbjct: 193 MRAQQLNADKESLTLELTKLQQSHRQLKTDLAAR---VEQLKQVEGRRQMLEQQLADVS- 248
Query: 67 GISA-PDSLTASNNSLTSIGTMNKR 90
G+SA D+ A N L+ + K+
Sbjct: 249 GMSANKDAEMALNKRLSEVNEELKK 273
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 26.6 bits (56), Expect = 6.8
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 14 LHRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDS 73
L RL L+ +S++E + + L K+A R L E+ D+Q+ + S +
Sbjct: 271 LERLREELKRSKDSMNEVR-RDALEQKKAADR----LREEVGSKDKQVRNYERKNSDLED 325
Query: 74 LTASNNSLTSIGTMNKRHVDSSDK----RQRIDANTRIQWRIYNNKKPIRQRFQGEPLPF 129
+ S M K V+S + + ++ ++ WR Y K+ F PL F
Sbjct: 326 QVEALKQDCSQAQM-KAEVESRQRMNLEKDLRNSEMKVLWRSYGRKRYKEPFFSCLPLNF 384
Query: 130 QIWM 133
++W+
Sbjct: 385 RVWI 388
>SB_53599| Best HMM Match : bZIP_1 (HMM E-Value=4)
Length = 90
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 20 SLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQL 61
S +S N DE +EL S+ + +W+QL + + LD++L
Sbjct: 19 SAKSRNNKKDEVLSVEELQKSEKMLYKWTQLDLEVSKLDKRL 60
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 20 SLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQL 61
S +S N DE +EL S+ + +W+QL + + LD++L
Sbjct: 1462 SAKSRNNKKDEVLSVEELQKSEKMLYKWTQLDLEVSKLDKRL 1503
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 26.6 bits (56), Expect = 6.8
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 29 DERQLQQELSSSKSAVRQWSQLLE----QSNMLDRQLAAISQGISAPDS-LTASNNSLTS 83
++ QLQ EL S +RQ S LE ++ L Q+A + + +S LT N+S +
Sbjct: 336 EKDQLQNELDSQTEELRQVSLCLEDAMKRTYELKSQIAHLQDNLKEKESLLTCYNSSKSD 395
Query: 84 IGTMN--KRHVDSSD 96
G + VD SD
Sbjct: 396 SGPSSYYSSPVDHSD 410
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 26.6 bits (56), Expect = 6.8
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 29 DERQLQQELSSSKSAVRQWSQLLE----QSNMLDRQLAAISQGISAPDS-LTASNNSLTS 83
++ QLQ EL S +RQ S LE ++ L Q+A + + +S LT N+S +
Sbjct: 27 EKDQLQNELDSQTEELRQVSLCLEDAMKRTYELKSQIAHLQDNLKEKESLLTCYNSSKSD 86
Query: 84 IGTMN--KRHVDSSD 96
G + VD SD
Sbjct: 87 SGPSSYYSSPVDHSD 101
>SB_24296| Best HMM Match : Pox_A32 (HMM E-Value=1)
Length = 1041
Score = 26.2 bits (55), Expect = 9.0
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 25 LNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDR---QLAAISQGISAPDSLTASNNSL 81
++SL E + +L + A R W ++L+Q+ + DR ++ A+S+ ++ + L + +
Sbjct: 64 VDSLIEIKRHDDLCLADEADRNWYEVLDQTYLFDRRTKEVEALSK-VTKSELLNCFVSYV 122
Query: 82 TSIGTMNKRHVDSSDKRQR 100
+ +K V SD QR
Sbjct: 123 SGGDHYSKLSVQPSDPCQR 141
>SB_22061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 26.2 bits (55), Expect = 9.0
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 16 RLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQS--NMLDRQLAAISQGISAPDS 73
RLD+ L +G S +R+ QQ+ ++++ + E + N L + ++ + + +S D
Sbjct: 313 RLDAKLLAGYGSPRQREQQQQNIERENSMIVLKGIREDNFYNALAKSVSDLIKAMSKEDK 372
Query: 74 LTASNNSLT-SIGTMNKRHVDSSDKRQRIDANTRIQWRIYNNKKPIRQRF 122
S N+L G + R++ TR W + K Q++
Sbjct: 373 KEDSGNTLNEKEGHKHHRNITWPKHHTEDLKGTRKSWVLLKIPKNEAQQY 422
>SB_17672| Best HMM Match : ERM (HMM E-Value=0.13)
Length = 391
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 22 RSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAI 64
R NS R + +E S S A +W + + +L++QLA +
Sbjct: 261 RGRRNSASSR-IDEEASKSLEATSKWQEQRRSNALLEKQLARV 302
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 26.2 bits (55), Expect = 9.0
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 29 DERQLQQELSSSKSAVRQWSQLLEQSNMLDRQLAAISQGISAPDSLTASNNSLTSIGTM- 87
++ Q Q+ S + V + S+ ++S+ +RQ +AI QGI+ P ++ T+ T+
Sbjct: 148 NDYQGQRSRQSVEMEVTEVSKRPQKSSHDNRQYSAIGQGITKPPIKHSNTEHQTTSRTLP 207
Query: 88 --NKRHVDSSDKRQRID 102
++ + +K QR +
Sbjct: 208 ISDRNKLKFDNKHQRTE 224
>SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031)
Length = 598
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/67 (25%), Positives = 25/67 (37%)
Query: 56 MLDRQLAAISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTRIQWRIYNNK 115
+LD +A +G+ L T GT VD DK D T +YN
Sbjct: 60 ILDGNMAIWREGVKEAFRLLKEARKGTKAGTGPPLEVDGIDKLDFSDGTTNTLEDLYNEL 119
Query: 116 KPIRQRF 122
P ++ +
Sbjct: 120 NPDKRSY 126
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 26.2 bits (55), Expect = 9.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 5 MIMVVNSNSL--HRLDSSLRSGLNSLDERQLQQELSSSKSAVRQWSQLLEQSNMLDRQL 61
M+M N L H+ SSL L SL + + E + Q L ++SN+ RQL
Sbjct: 772 MLMQENKTLLQQHKDQSSLLVNLQSLQNKLERSEFETRTRLEGQVEALQKESNLAKRQL 830
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 63 AISQGISAPDSLTASNNSLTSIGTMNKRHVDSSDKRQRIDANTR 106
A S +S P + +S T ++++R D+ KR+RI + R
Sbjct: 103 AASPPVSTPRQQRRTPSSFTPRSSISRRRSDTPKKRRRISVSRR 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.125 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,860,353
Number of Sequences: 59808
Number of extensions: 132604
Number of successful extensions: 528
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 39
length of query: 133
length of database: 16,821,457
effective HSP length: 75
effective length of query: 58
effective length of database: 12,335,857
effective search space: 715479706
effective search space used: 715479706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -