Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002433-TA|BGIBMGA002433-PA|undefined
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 31 0.39
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 31 0.68
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 31 0.68
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 30 0.90
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 30 0.90
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 29 1.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 2.1
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 29 2.1
SPCC126.11c |||RNA-binding protein, rrm type|Schizosaccharomyces... 29 2.1
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 29 2.8
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 2.8
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 28 3.6
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 28 3.6
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 28 4.8
SPBC30D10.06 |lsm4||U6 snRNP-associated protein Lsm4|Schizosacch... 28 4.8
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 28 4.8
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 28 4.8
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 6.4
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 6.4
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 27 6.4
SPAC1782.04 |cox24||mitochondrial mRNA processing protein Cox24 ... 27 6.4
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 27 6.4
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 27 6.4
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 6.4
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 6.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 6.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 6.4
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 6.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 6.4
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 8.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 8.4
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 8.4
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 27 8.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 8.4
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 27 8.4
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 31.5 bits (68), Expect = 0.39
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 309 VDRDPPSISSAYQTCNTKTRTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATP 368
+D+D S T PEP+++ D V+ Q +N ++ E GS H P
Sbjct: 159 IDKDRESFDKNLNQSFTNLTFPEPISDDSDSVEFQR----DSLNNNWPASLE-GSIHELP 213
Query: 369 ---DSPGTPTHASASLSLSDGRDFFD 391
D G P A+ L L RD +D
Sbjct: 214 RNSDDDGIPASAAHILDLDYHRDSYD 239
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 30.7 bits (66), Expect = 0.68
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 592 AEESNLQHSWHSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDI 651
+E++ +S +P+N+ S +T P N+ T T S N N S+S+ DI
Sbjct: 459 SEKTGKSNSQQAPSNHVLSKSNT-VP-NLVTGFPTRS-DNPPNEKRRRTSSSENSRALDI 515
Query: 652 ETSAAEQTGPNEK 664
+ SA++ PN K
Sbjct: 516 QLSASDSHSPNSK 528
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 30.7 bits (66), Expect = 0.68
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 316 ISSAYQTCNTKTRTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSPGTP- 374
I S Y+T K + P + KV E E +V SN+++ K P SP P
Sbjct: 496 IRSFYETATVKAKAPTK----KSKVKPSKQE---ESKVVVPSNAKAVKKSVVPSSPVVPS 548
Query: 375 ----THASASLSLSDGRDFFDDEIADQP 398
T+ S S+ +S G F + + +P
Sbjct: 549 PRKATNKSLSMDVSKGNAFENGPLLPRP 576
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 38 LPSSFDSEP-SPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTI 96
+PSS P SP Y +P Y P SP P P + T S+ T Y + T PS
Sbjct: 1572 MPSSPSYSPTSPSYSPTSPSYSPTSPSY-SPTS-PSYSATSPSYSPTSPSY-SPTSPSYS 1628
Query: 97 QTS 99
TS
Sbjct: 1629 PTS 1631
Score = 30.3 bits (65), Expect = 0.90
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 44 SEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTS 99
S SP Y A +P Y P SP P P + T S+ T Y + T PS TS
Sbjct: 1600 SPTSPSYSATSPSYSPTSPSY-SPTS-PSYSPTSPSYSPTSPSY-SPTSPSYSPTS 1652
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDPPSP-ILPKPIQI---PEFEQTQNSHMSTLDRYRNRT 91
P S F S SP Y +P Y P SP P + P + T S+ T Y + T
Sbjct: 1537 PGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSY-SPT 1595
Query: 92 RPSTIQTS 99
PS TS
Sbjct: 1596 SPSYSPTS 1603
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 25 AVVTGHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTL 84
A+ G+ + PSS SP Y +P Y P SP P P + T S+ T
Sbjct: 1546 AMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSY-SPTS-PSYSPTSPSYSPTS 1603
Query: 85 DRYRNRTRPSTIQTS 99
Y + T PS TS
Sbjct: 1604 PSY-SATSPSYSPTS 1617
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 602 HSPNNYGYSTDSTPTPDNINTSIDTPS-APNDSNTSINTPSASKVQTTQDIETSAAEQTG 660
+SP++ GYST P + + S +PS +P + S +PS S + + + T
Sbjct: 1558 YSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTS 1617
Query: 661 PN 662
P+
Sbjct: 1618 PS 1619
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 44 SEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTS 99
S SP Y +P Y P SP P P + T S+ T Y + T PS TS
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPSY-SPTS-PSYSPTSPSYSPTSPSY-SPTSPSYSPTS 1687
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 44 SEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTS 99
S SP Y +P Y P SP P P + T S+ T Y + T PS TS
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPSY-SPTS-PSYSPTSPSYSPTSPSY-SPTSPSYSPTS 1722
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 30.3 bits (65), Expect = 0.90
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 332 PVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSPGTPTHASASLSLSDGR-DFF 390
P + Q VD + + V ++++ Q + S+ +P +PT A + LS+G+ D
Sbjct: 268 PSSCRQQPVDEERQDRVSKISKHFQDSGTPVSEEVSPTRLPSPTSARRASHLSEGKWDEI 327
Query: 391 DDEIADQPALLFRIKTAKSRWKQLRDNHRDALKRQNATRS 430
DDE D + + + + +KRQ+ S
Sbjct: 328 DDEDDDDWGSTIEFEDGTTVVIDAKTRRYEPVKRQDTLAS 367
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 29 GHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPS-----PILPKPIQIPEFEQTQNS 79
G+ V+P P++ S P P PAPIY+ P+ + P P P F T +
Sbjct: 342 GNQVMPTPQVQGS---RPPPPPPMPAPIYNVPNVPTVPTVSPNPFLQPTFSGTSQA 394
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 599 HSWHSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSI 637
++W+S +++ ST STP + ++S PS N S+ +
Sbjct: 203 NNWNSSSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHV 241
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 596 NLQHSWHSPNNYGYSTDSTPTPDNINTSIDTPS--APNDSNTSINTPSASK 644
N+ ++ +P++ YS + P + IN ID+P+ P N T +S+
Sbjct: 278 NVNYNMTTPSSPSYSRQTGPASETINDEIDSPNFFFPTPLNIMTTTQDSSR 328
>SPCC126.11c |||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 183
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 349 KEMNEIVQSNSESGSKHATPDSPGTPTHASASLSLSDGRDFFDDEIADQPALLFRIKTAK 408
K N+ Q S KH G PT+A +L+ + FD I Q +
Sbjct: 3 KRGNKKKQEAPLSLGKHTVGGRVGKPTNAKTGSALTSDKSLFDKRIVKQ----LKNNELF 58
Query: 409 SRWKQLRDNHRDALKRQNATRSGQARKQ 436
+R RD + R+N T+ + Q
Sbjct: 59 NRLTLPSQELRDGIVRENQTKPSNSNSQ 86
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 72 EFEQTQNSHMSTLDRYRNRTRPSTIQTSLEEEKFVRDRAQPEKLNKQNSFVKSSS 126
E ++++ SH + D R + P T+ ++ F+R+R + + L+ N +S S
Sbjct: 868 ETQRSRKSHEGSNDLERQPSSPDTVHPGIKRSHFIRERVK-QLLSDANKHHQSPS 921
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/70 (20%), Positives = 36/70 (51%)
Query: 591 SAEESNLQHSWHSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQD 650
S+E+S+ S + S DS + ++ ++ D+ S +DS + ++ + ++ D
Sbjct: 248 SSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSD 307
Query: 651 IETSAAEQTG 660
++S++ + G
Sbjct: 308 SDSSSSSEDG 317
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 28.3 bits (60), Expect = 3.6
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 328 RTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSPGTPTHASASLSLSDGR 387
+T E A D V Q + N+ + G + A P SP LS + +
Sbjct: 30 QTEEAKAVFGDGVAKQENKSGASTND--EKKPAEGDEDAEPASPEVHFEPIVKLSAVETK 87
Query: 388 DFFDDEIAD--QPALLFRIKTAKSRWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKA 445
++E + A LFR A S WK+ LK + ++ ++ K K A
Sbjct: 88 TNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKV-CA 146
Query: 446 MSFLLPYM 453
L+P M
Sbjct: 147 NHLLMPEM 154
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 39 PSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQT 98
PSS ++P+PD + P P P +P++ + + T+ + S+ R +R + + ++
Sbjct: 173 PSS--TKPAPDAKEPEFSSPKPKPAKSEPVKQSKPKATETARPSSFSRNEDRVKMNRMRL 230
Query: 99 SLEE 102
+ E
Sbjct: 231 RIAE 234
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 613 STPTPDNINTSIDTPSA--PNDSNTSINTPSASKVQTTQDIETSAAEQTGP 661
S PTP N ++ +D S P+ +N++ TP+ + T + T+ A GP
Sbjct: 594 SRPTP-NASSPLDVRSKQKPSSANSNAPTPAPTVNTTNPESSTNEATSVGP 643
>SPBC30D10.06 |lsm4||U6 snRNP-associated protein
Lsm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 75 QTQNSHMSTLDRYRNRTRPSTIQTSLEEEKFVR 107
+T N H+ D Y N T I+T + +KF R
Sbjct: 23 ETFNGHLENCDNYMNLTLREVIRTMPDGDKFFR 55
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 405 KTAKSRWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQK 444
K + WK+ +DN + A+ + R +K+R+ K +K
Sbjct: 181 KKSSDAWKERKDNEKKAMLMRQQRREENLKKRRESKKSKK 220
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/67 (22%), Positives = 27/67 (40%)
Query: 314 PSISSAYQTCNTKTRTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSPGT 373
P+ + + T N T TP + + T N+ +++ +G+ AT + GT
Sbjct: 137 PAGNHSSTTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGTGT 196
Query: 374 PTHASAS 380
AS
Sbjct: 197 GAGTGAS 203
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 37 KLPSSFD-SEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPST 95
KLPS+F ++ +P P+ Y PP P+ PKP P + S ++ D + T T
Sbjct: 408 KLPSNFRVTQGAP----PSHTYGPPPPVQPKPKISPTTPRL--STLALADDMFSSTAKET 461
Query: 96 IQTS 99
+ T+
Sbjct: 462 VPTN 465
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 72 EFEQTQNSHMSTLDRYRNRTRPSTIQTSLEEEKF 105
+FE+T + ++L RY +++ T +E KF
Sbjct: 363 DFEETSRDYYTSLSRYLSKSEKETSSDKTKESKF 396
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 549 MMLANDKYDEIDLFFFNLAASTKKLPYYLQLEIKRKCFNAVMSAEESNLQHSWHSP 604
M L ND+ + + F+N +K+ ++++ C E+ +LQ SW+ P
Sbjct: 661 MCLWNDQ--QYEKLFYNCEWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCP 714
>SPAC1782.04 |cox24||mitochondrial mRNA processing protein Cox24
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 27.5 bits (58), Expect = 6.4
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 318 SAYQTCNTKTRTPEPVAETQDKVDGQATECVKEMNE-IVQSNSESGSKHATPDSPGTPTH 376
SA Q C K + V+++QD+ D Q E V + + + + S S S T P
Sbjct: 67 SANQICVPKVESKTQVSQSQDEED-QPQEYVLSLEDGYLYAQSFSASGSVTQTQP----- 120
Query: 377 ASASLSLSDGRDFFDDEIADQPALLFRIKTAKSRWKQLRDNHRDALKRQNATR 429
A +S D I+ P L +K K + K + + L+RQ A R
Sbjct: 121 --ARISTQVWEQICDKLISITPLDLTSVK-RKRKLKMNKHKFKKRLRRQRALR 170
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 602 HSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSN-TSINTPSASKVQTTQDIETSAAEQT 659
HS +S S+PTP N N+ S +SN +S P+A+ Q+ +S+A T
Sbjct: 267 HSSKMPKHSLPSSPTPFNSNSGDSLLSRIKNSNQSSSERPTANNGAQEQNQSSSSAGNT 325
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 333 VAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSPGTPT-HASASLS 382
V E +K+ ++ + +E + +S + SKH ++P +PT SAS S
Sbjct: 231 VYEDAEKLSQLSSSLISSFSEQPKEHSPATSKHEPEETPASPTPSVSASTS 281
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 621 NTSIDTPSAPNDSNTSINTPS--ASKVQTTQDIETSAAEQTGPNEKCGQ 667
N+ D P+ + ++ PS S + +Q+ TS ++ TGPNE +
Sbjct: 362 NSGSDEDDQPSADSPTLMHPSDLISSLVNSQNQTTSVSDNTGPNENVNE 410
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 611 TDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQT 659
+ S+ P +I TS TP + S+ S TPS S TT T+ T
Sbjct: 240 SSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSAT 288
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 29 GHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKP 67
G ++P PK P++ P A Y+PP+ +P P
Sbjct: 1005 GSQIVPPPKQPANRVVPLPPTASQRASAYEPPTVSVPSP 1043
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 611 TDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETS 654
T+S+P P + + S P ++S++TP V T TS
Sbjct: 217 TNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTS 260
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.5 bits (58), Expect = 6.4
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 319 AYQTCNTKTRTPEPVAETQD------KVDGQAT---ECVKEMNEIV--QSNSESGSKHAT 367
A C T+ + E AE K+ GQ + +K ++EIV Q+N +S +HA
Sbjct: 161 ACNVCGTELKDDEESAEMMSSQKRLGKLMGQVNGIIDALKRVDEIVVPQNNFQSALEHAV 220
Query: 368 PDSPGTPTHASASLSLSD 385
P S T + +LS S+
Sbjct: 221 PVSLDTQNLSQQNLSKSN 238
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGPN 662
S +TPTP N TSI+ + +S+ + S K T D+ +A++++ P+
Sbjct: 263 SPRNTPTPSNNGTSINA-----NVTSSLTSNSTGKTSKTTDLLIAASKKSLPS 310
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 604 PNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTS 636
PN + S DS NI+ +I TP+AP S S
Sbjct: 40 PNMHRPSRDSNSQTHNISFNIGTPTAPTVSTGS 72
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 603 SPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINT---PSASKVQTTQDIETSAAEQT 659
+P YGY+T ++ + +I + TPS N ++ +++ P+ S++ ++ + + +
Sbjct: 69 TPTYYGYATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEY 128
Query: 660 GPN 662
P+
Sbjct: 129 TPS 131
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 577 LQLEIKRKCFNAVMSAEESNLQHSWHSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSN 634
L LE++++C N + S EE + S N S D D+++ D P N++N
Sbjct: 622 LFLELRQRCKNLMTSIEEQKSELS-----NLYESFDPNGIHDSLSLDADAPFTVNENN 674
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 611 TDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETS-AAEQTGPNEK 664
TD + IN +I++PS S + + V+ T ++TS A PN++
Sbjct: 55 TDPSNAKKEINMAIESPSKKATSPKKATPAAVAPVEATSAVDTSEAVASMTPNKR 109
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 32 VIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIP 71
V P+PKL S P P +AP PI P P P+ IP
Sbjct: 1011 VPPVPKLSSKAPPVPLPSADAP-PI---PVPSTAPPVPIP 1046
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 609 YSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGPNE 663
Y+T + + + ID + P+ + PS + Q TQ +TSA P+E
Sbjct: 153 YTTVNGNVNQSYSKGIDGTALPSTHANPVAAPSTATTQHTQLPKTSAVSHQKPHE 207
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.125 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,720,472
Number of Sequences: 5004
Number of extensions: 108083
Number of successful extensions: 504
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 427
Number of HSP's gapped (non-prelim): 84
length of query: 668
length of database: 2,362,478
effective HSP length: 77
effective length of query: 591
effective length of database: 1,977,170
effective search space: 1168507470
effective search space used: 1168507470
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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