GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002433-TA|BGIBMGA002433-PA|undefined
         (668 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    28   0.69 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    28   0.91 
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    27   1.2  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   2.8  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   6.4  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   6.4  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   6.4  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    25   8.5  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 0.69
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 587 NAVMSAEESNLQHSWHSPNNYGYSTDSTPTPD-----NINTSIDTPSAPNDSNTSINTPS 641
           N +   ++   Q   HSP+ Y       P P      N++T  +   A    +  ++  S
Sbjct: 60  NVIQLQQQQQQQQLHHSPHQYHQQVQHQPQPPSTPFANVSTGQNESLANLLLHPGVHQLS 119

Query: 642 ASKVQTTQDIETSAAEQTGPNEKCGQL 668
           +  V    DI   + +   P E+C +L
Sbjct: 120 SGLVTLVGDIMAQSGDTILPREECDRL 146


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 27.9 bits (59), Expect = 0.91
 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 602 HSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQ 658
           H  NN+    + T    + ++S  + S  +DS++S ++ S+S  +  ++ + S AEQ
Sbjct: 350 HDKNNFVRPANETDDSSSSSSSSSSDS-DSDSSSSSDSSSSSSEEEAENFKISTAEQ 405


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 1.2
 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 602 HSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQ 658
           H  NN+    + T    + ++S  + S  +DS++S ++ S+S  +  ++ + S AEQ
Sbjct: 350 HDKNNFVRPANETDDSSSSSSSSSSDS-DSDSSSSSDSSSSSSEEEAENFKISPAEQ 405


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
          binding protein protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 32 VIPLPKLPSSFDSEPSPDYEAP-API 56
          V+P  K+P+S+ S P+P   +P API
Sbjct: 41 VLPASKMPTSYPSLPAPIVPSPGAPI 66


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 387 RDFFDDEIADQPALLFRIKTAKS 409
           R   DDE AD+P  L R K+ KS
Sbjct: 349 RSLDDDESADEPGELQRAKSKKS 371


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSI-NTPSASKVQTTQDIETSAAEQTGP 661
           +T +TP P    T  D P  P  + T++   P+A+         T+ ++Q  P
Sbjct: 194 ATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDQPPP 246


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 600 SWHSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDI 651
           +W +P      +D  P P    T++ T     DS  +  TP+++   T  D+
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTTTTVWT-----DSTATTTTPASTTTTTWSDL 210


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
          protein protein.
          Length = 109

 Score = 24.6 bits (51), Expect = 8.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 34 PLPKLPSSFDSEPSPDYEAPAPIYDP 59
          P P L  S     +P+Y  P  + DP
Sbjct: 1  PKPPLTKSLQLSTTPEYHIPTXVLDP 26


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.125    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,863
Number of Sequences: 2123
Number of extensions: 21909
Number of successful extensions: 44
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 41
Number of HSP's gapped (non-prelim): 8
length of query: 668
length of database: 516,269
effective HSP length: 69
effective length of query: 599
effective length of database: 369,782
effective search space: 221499418
effective search space used: 221499418
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)