Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002433-TA|BGIBMGA002433-PA|undefined
(668 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 36 0.070
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 36 0.12
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 34 0.37
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 33 0.49
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 33 0.49
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 33 0.49
Z81130-1|CAB03413.1| 168|Caenorhabditis elegans Hypothetical pr... 33 0.65
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 33 0.65
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 33 0.65
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 33 0.86
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 33 0.86
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z69634-5|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 32 1.1
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 32 1.1
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 1.5
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 32 1.5
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 32 1.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 32 1.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 32 1.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 32 1.5
Z48585-10|CAJ43439.1| 338|Caenorhabditis elegans Hypothetical p... 31 2.0
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 2.0
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 31 2.6
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 31 2.6
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 31 2.6
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 31 2.6
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 31 2.6
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 2.6
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 31 2.6
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 3.5
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 3.5
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 31 3.5
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 30 4.6
U50193-4|AAP68917.1| 492|Caenorhabditis elegans Nuclear pore co... 30 4.6
U50193-3|AAP68918.1| 1189|Caenorhabditis elegans Nuclear pore co... 30 4.6
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 30 4.6
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 4.6
Z82280-7|CAB05269.2| 224|Caenorhabditis elegans Hypothetical pr... 30 6.1
Z66565-8|CAE17924.1| 287|Caenorhabditis elegans Hypothetical pr... 30 6.1
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 30 6.1
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 30 6.1
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 30 6.1
Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical pr... 29 8.0
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 29 8.0
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 29 8.0
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 29 8.0
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 29 8.0
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 29 8.0
AF077544-1|AAK39241.2| 231|Caenorhabditis elegans Hypothetical ... 29 8.0
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 29 8.0
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 8.0
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 36.3 bits (80), Expect = 0.070
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 25 AVVTGHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPIL--PKPI 68
A+ +P+P + F + P+P APAP+ PP+P+ P+P+
Sbjct: 85 AIPLAAPALPVPVAAAPFFASPAPVLAAPAPLLAPPAPVFAAPRPV 130
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 35.5 bits (78), Expect = 0.12
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 25 AVVTGHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPIL--PKPI 68
A+ +P+P + F + P+P APAP+ PP+P+ P+P+
Sbjct: 72 AIPLAAPALPVPIAAAPFFTPPAPVLAAPAPLLAPPAPVFAAPRPV 117
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 33.9 bits (74), Expect = 0.37
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 604 PNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGPNE 663
P Y +++ +PD + T PS N + T+ +T + + TT D +TS E+T P
Sbjct: 82 PGGSIYCKNNSSSPDCLTTI--APSEDNSTTTASSTEATTFSTTTSDEKTSTTEKTNPGP 139
Query: 664 KCG 666
G
Sbjct: 140 APG 142
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.49
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 25 AVVTGHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPE-FEQTQ 77
AV +A++P P P+ P P Y P P+Y P P I P+ F+ TQ
Sbjct: 106 AVAPQYAMVPYPTPPAYV--RPPPVYVTPPPVYITPPPTTTTTIPPPKCFQNTQ 157
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 33.5 bits (73), Expect = 0.49
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 603 SPNNYGYSTDSTP-TPDNINTSIDTPSAPNDSNTSINTPSASK 644
S + YS DS P + D ++SI+TPS PN+++ S P AS+
Sbjct: 318 SQQSPSYSLDSPPPSSDTSSSSIETPSTPNENSNS--NPKASR 358
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 33.5 bits (73), Expect = 0.49
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 603 SPNNYGYSTDSTP-TPDNINTSIDTPSAPNDSNTSINTPSASK 644
S + YS DS P + D ++SI+TPS PN+++ S P AS+
Sbjct: 318 SQQSPSYSLDSPPPSSDTSSSSIETPSTPNENSNS--NPKASR 358
>Z81130-1|CAB03413.1| 168|Caenorhabditis elegans Hypothetical
protein T23G11.1 protein.
Length = 168
Score = 33.1 bits (72), Expect = 0.65
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSINTP--SASKVQTTQDIETSAAEQTGPN 662
S DS NT++ P + ++ NT+IN+ S K T + T+ A + GP+
Sbjct: 4 SVDSRTAQSETNTAVIPPMSDSELNTAINSTLRSRGKASTRTALSTATAVENGPS 58
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQT 659
STDST T ++ ++ S DS T+ +T +++ TT+ S E T
Sbjct: 225 STDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTESTTEST 274
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 409 SRWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKAMSFLLPYMCNR 456
+RWKQLRD + ++Q + ++ W+Y K + FL P+M +R
Sbjct: 56 ARWKQLRDKYGKEKRKQ------KYGNEKSSWQYFKHLHFLDPHMTDR 97
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 32.7 bits (71), Expect = 0.86
Identities = 26/117 (22%), Positives = 45/117 (38%)
Query: 268 ESKFDMSALETSTQSLLDDETSPADXXXXXXXXXXXXXELHVDRDPPSISSAYQTCNTKT 327
++K D + +ST + T A + + +S+ T N +
Sbjct: 561 QNKIDKNVRMSSTPRIDAQSTPSAVVSALPTPMNSPLPRVTSSKSAQDVSTPSTTPNPVS 620
Query: 328 RTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSPGTPTHASASLSLS 384
R+P+PVA +D V ++T E + S + P T + SASL+ S
Sbjct: 621 RSPDPVALVKDSVSSESTVSGIVSLEKIGSPAAQSVASVLPSVSNTTSSTSASLTTS 677
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 32.7 bits (71), Expect = 0.86
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 32 VIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPE 72
V P P+ P+ P+P+ APAP+ + P + P P PE
Sbjct: 121 VAPAPETPA-----PAPETPAPAPVQETPQVVAPAPEPTPE 156
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 407 AKSRWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKAMSFLLPYMCNRDGSS 460
AK RW QLRD +R LK A ++G R W Y +S+L P++ + G +
Sbjct: 55 AKKRWLQLRDRYRKELK--IAIKNGFVTPVR--WCYFNQLSWLDPFLKDNIGQA 104
>Z69634-5|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 596 NLQHSWHSPNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPS-ASKVQTTQDIE 652
NL+H H ++ D++P +N N +PS +D+++S+++ + + +++D+E
Sbjct: 487 NLEHQSHDSSSTDGLRDTSPVGNNTNPRSGSPSCHSDTHSSVSSSLWITTINSSKDLE 544
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPST 95
P P + ++ EAP P PP P P P Q+ + +Q Q + R T PS
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPPPPPPPQLQQ-QQVQ-LPLQDATTLRPSTLPSE 174
Query: 96 IQTSLEEEKFVRDRAQP 112
LE + V + QP
Sbjct: 175 TYVELENPEAVVNEPQP 191
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 611 TDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQT 659
T +T TP T+ TP+ + T+ TP+ + +TT T+ + T
Sbjct: 218 TTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTT 266
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGP 661
+T +TPT + T A S T+ TP+ + TT+ T+ T P
Sbjct: 229 TTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTP 280
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 613 STPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGP 661
ST T +T TP+ ++TS +TPS + TT TS+ + P
Sbjct: 519 STTTSSTTSTEASTPTTSTSTSTSTSTPSTT-TSTTSTSTTSSTSSSAP 566
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDP---PSPIL-------PKPIQIPEFEQTQNSHMSTLD 85
PK P+ + EP P E P P+ +P P P+ P + P E + + +
Sbjct: 487 PKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATE 546
Query: 86 RYRNRTRPSTIQTSLEEEKFVRDRAQP 112
P ++ S+E+ + V + + P
Sbjct: 547 PTAEEAEPEAVEESIEKTEVVEEESAP 573
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDP---PSPIL-------PKPIQIPEFEQTQNSHMSTLD 85
PK P+ + EP P E P P+ +P P P+ P + P E + + +
Sbjct: 437 PKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATE 496
Query: 86 RYRNRTRPSTIQTSLEEEKFVRDRAQP 112
P ++ S+E+ + V + + P
Sbjct: 497 PTAEEAEPEAVEESIEKTEVVEEESAP 523
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDP---PSPIL-------PKPIQIPEFEQTQNSHMSTLD 85
PK P+ + EP P E P P+ +P P P+ P + P E + + +
Sbjct: 487 PKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATE 546
Query: 86 RYRNRTRPSTIQTSLEEEKFVRDRAQP 112
P ++ S+E+ + V + + P
Sbjct: 547 PTAEEAEPEAVEESIEKTEVVEEESAP 573
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDP---PSPIL-------PKPIQIPEFEQTQNSHMSTLD 85
PK P+ + EP P E P P+ +P P P+ P + P E + + +
Sbjct: 487 PKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETATE 546
Query: 86 RYRNRTRPSTIQTSLEEEKFVRDRAQP 112
P ++ S+E+ + V + + P
Sbjct: 547 PTAEEAEPEAVEESIEKTEVVEEESAP 573
>Z48585-10|CAJ43439.1| 338|Caenorhabditis elegans Hypothetical
protein ZK673.11b protein.
Length = 338
Score = 31.5 bits (68), Expect = 2.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 45 EPSPDYEAPAPIYDPPS----PILPKPIQIPEFEQTQNSHMSTLDR 86
+P+P+++ PAP Y PPS KP +I E N LDR
Sbjct: 178 QPTPEFQLPAPTYSPPSLPSESPASKPTKIDIPEAILNDRDDILDR 223
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGPNEKCG 666
S ST TP + +++ PS +DS +S +T + + + S ++ T P+ G
Sbjct: 927 SQGSTQTPGSTGSTVTQPSTVSDSTSSGSTVTVGSTEGSSSPIPSTSQNTNPSTSSG 983
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 31.5 bits (68), Expect = 2.0
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 330 PEPVAETQDKVDGQATECVKEMNEIV-QSNSESGSKHATPDSPGTPTHASASLSLSDGRD 388
PEPV E + +V+ + V++ NEI Q ++ S P +P + S S +S+
Sbjct: 106 PEPVPEPEPEVEAKQNVIVEKENEIKDQQQNDQLSAKLDPKTPNSVDDNSMSFDISECER 165
Query: 389 FFDDEIADQPALL 401
F+ I + +L
Sbjct: 166 KFNTAIREANDIL 178
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 410 RWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKAMSFLLPYMCNRD 457
+WK +RD + L++Q+ ++ +K K + Y MSFL PY+ +R+
Sbjct: 69 KWKHMRDKYV-RLRKQDKQKA-PIKKTNKWYNYYHKMSFLDPYVEHRN 114
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 410 RWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKAMSFLLPYMCNRD 457
+WK +RD + L++Q+ ++ +K K + Y MSFL PY+ +R+
Sbjct: 69 KWKHMRDKYV-RLRKQDKQKA-PIKKTNKWYNYYHKMSFLDPYVEHRN 114
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 603 SPNNYGYSTDSTPTPDNINTSIDT-PSAPNDSNTSINTPSASK 644
SPNN +S D P+P +I + T P A + + +P + K
Sbjct: 113 SPNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDRMGSPGSCK 155
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSN--TSINTPSASKVQTTQDIETSAAEQTGPNEKC 665
+T +TP P T+ TP+ T+ TP+ + TT T A P +KC
Sbjct: 424 TTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPLKKC 481
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 326 KTRTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPDSP 371
+ RTP P+ E D + E +E E ++ SE+GS +AT + P
Sbjct: 706 RVRTPTPIPE--DDLPEDTAEGSEEGRESEETGSETGSDYATDEGP 749
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 31.1 bits (67), Expect = 2.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 57 YDPPSPILPKPIQIPEFEQTQNSHMSTL 84
Y+PP P P+P++IP+ E T +L
Sbjct: 3224 YEPPEPAPPQPVEIPKVEPTPEISFESL 3251
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 31.1 bits (67), Expect = 2.6
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 348 VKEMNEIVQSNSESGSKHATPDSPGTPTHASASLSLSDGRDF-FDDEIADQPALLFRIKT 406
+KE+NE ++ N ++ DS + +S S SD D D+E D P L T
Sbjct: 709 LKEVNEELKKNLGVEVLESSDDSDCSSDSSSDSDCSSDSSDSEEDEEYRDMPKLKDE-TT 767
Query: 407 AKSRWKQLRDNHRDALKRQN 426
A++ W+ + + +A ++QN
Sbjct: 768 AENSWELVGEEEEEAEQQQN 787
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 30.7 bits (66), Expect = 3.5
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 44 SEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTS 99
S SP Y +P Y P SP + P + T S+ T Y + T PS TS
Sbjct: 1583 SMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSY-SPTSPSYSPTS 1637
Score = 30.3 bits (65), Expect = 4.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPS 94
P P++ S SP Y +P Y P SP P P + T S+ T Y + T PS
Sbjct: 1598 PTSPAAGQSPVSPSYSPTSPSYSPTSPSY-SPTS-PSYSPTSPSYSPTSPSY-SPTSPS 1653
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 30.7 bits (66), Expect = 3.5
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 44 SEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTS 99
S SP Y +P Y P SP + P + T S+ T Y + T PS TS
Sbjct: 1590 SMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSY-SPTSPSYSPTS 1644
Score = 30.3 bits (65), Expect = 4.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 36 PKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPS 94
P P++ S SP Y +P Y P SP P P + T S+ T Y + T PS
Sbjct: 1605 PTSPAAGQSPVSPSYSPTSPSYSPTSPSY-SPTS-PSYSPTSPSYSPTSPSY-SPTSPS 1660
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 30.7 bits (66), Expect = 3.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 408 KSRWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKAMSFLLPYMCNR 456
K+RWK LRD ++ K++ + K+ W +Q+ + F+ ++ +R
Sbjct: 96 KTRWKTLRDRYKKEEKKERVS------KKASSWVFQRPLKFIQAHLKDR 138
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 604 PNNYGYSTDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQT 659
P+ +T S+ T NT + + P+ S+ S TP+A T TS QT
Sbjct: 34 PSTSTTATSSSATETTSNTDSSSTATPSPSSASSTTPTAQSSTATSPAMTSPFIQT 89
>U50193-4|AAP68917.1| 492|Caenorhabditis elegans Nuclear pore
complex protein protein10, isoform a protein.
Length = 492
Score = 30.3 bits (65), Expect = 4.6
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 310 DRDPPSISSAYQTCNTKTRTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPD 369
+RDPPS++ TC+ T EPV+ A+ E V NS +G K PD
Sbjct: 236 NRDPPSLNLD-TTCDEHTGL-EPVSAATSSA---ASVVSTPSEETVNVNSAAGVKLTKPD 290
Query: 370 SPGTPTHASASLSLSDGRDFFDD 392
PT + +GR +D
Sbjct: 291 YFSLPTINEMKNMIKNGRVVLED 313
>U50193-3|AAP68918.1| 1189|Caenorhabditis elegans Nuclear pore
complex protein protein10, isoform b protein.
Length = 1189
Score = 30.3 bits (65), Expect = 4.6
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 310 DRDPPSISSAYQTCNTKTRTPEPVAETQDKVDGQATECVKEMNEIVQSNSESGSKHATPD 369
+RDPPS++ TC+ T EPV+ A+ E V NS +G K PD
Sbjct: 236 NRDPPSLNLD-TTCDEHTGL-EPVSAATSSA---ASVVSTPSEETVNVNSAAGVKLTKPD 290
Query: 370 SPGTPTHASASLSLSDGRDFFDD 392
PT + +GR +D
Sbjct: 291 YFSLPTINEMKNMIKNGRVVLED 313
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 30.3 bits (65), Expect = 4.6
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 598 QHSWHSPNNYGYSTDSTPTPDNINTSIDTPSAPND-SNTSINTPSASKV-QTTQDIETSA 655
Q +P +T +T P T+ + AP + S T++ AS + + ETS
Sbjct: 479 QKPTEAPTTEEPTTTTTEEPTTTTTTEEPTEAPTEPSPTTVEATEASTTPEASTSSETST 538
Query: 656 AEQTGPNEK 664
E + PN+K
Sbjct: 539 TENSEPNQK 547
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 30.3 bits (65), Expect = 4.6
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 31 AVIPLPKLPSSFDSEPSPDY-EAPAPIYDPPSPILPKPIQIPEFEQTQNSHMS 82
A+ PLP P++ P P Y +A A +PP LP P+Q+P + Q+ S
Sbjct: 1274 AIAPLP--PANTIMPPPPPYNQASAVPLNPPRTALP-PLQLPPLQPLQSESPS 1323
>Z82280-7|CAB05269.2| 224|Caenorhabditis elegans Hypothetical
protein R05A10.8 protein.
Length = 224
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 573 LPYYLQLEIKRKCFNAVMSAEESNLQHSWHSPNNYGYSTD 612
+PY L+ K + + EE + SWH+P GY++D
Sbjct: 181 IPYMLEKAGKHEVELLKIDIEEDLHRGSWHTPETLGYASD 220
>Z66565-8|CAE17924.1| 287|Caenorhabditis elegans Hypothetical
protein T04F8.9 protein.
Length = 287
Score = 29.9 bits (64), Expect = 6.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 22 MDDAVVTGHAVIPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQ 69
++D +T ++ P P++F S+ + +P P Y PPSP +Q
Sbjct: 137 IEDRRITDNSNAPPAYNPTNFVSDNNIASFSPPPYYSPPSPFFGTSVQ 184
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 29.9 bits (64), Expect = 6.1
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Query: 263 TLTLEESKFDMSALETSTQSLLDDETSPADXXXXXXXXXXXXXELHV-DRDPPSISSAYQ 321
T + K + + L++++ P+ V + + PS S++ +
Sbjct: 1417 TRSASVQKSSSKVKDQKPEELIEEDRPPSRNTRSASAQKTVAANKSVLESEIPSRSASRR 1476
Query: 322 TCNTKTRTPEPVAETQDKVDGQATEC-VKEMNEIVQSNSESGSKHATPDSPGTPT-HASA 379
T +T R + VAE + T + +E+V S +TP + TPT A+A
Sbjct: 1477 TRSTSLRN-DTVAEPDETSVAMTTRRRTRATSEVVSKQSSEDDGRSTPKTGRTPTKKAAA 1535
Query: 380 SLSLS 384
S S S
Sbjct: 1536 STSSS 1540
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 33 IPLPKLPSSFDSEPSPDYEAPAPIYDPPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTR 92
IP+P + S ++ P +P P+ P + +LP I + +N + + R+ +R
Sbjct: 537 IPIPSIFSPYEPIVPPPATSPDPMNPPIASLLPTRI-LSATNVLENKYNENVSSRRSTSR 595
Query: 93 PSTIQTSLEEEKFVRDRAQPEKLNKQNSFVKSSSG 127
+ + +E D + P + ++ ++ G
Sbjct: 596 ERSSNRNYDERWSRNDYSNPRNYSNRSFHQRNQRG 630
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 29.9 bits (64), Expect = 6.1
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 10/52 (19%)
Query: 21 IMDDAVVTGHAVIPLP---------KLPSSFDSEPSPDYEAP-APIYDPPSP 62
I +D++ G+ VI P +LPSS S PSP P +P++ P+P
Sbjct: 247 IDEDSIAIGYPVIETPDNDPSVCSYRLPSSLGSAPSPSPPRPLSPVFGQPAP 298
>Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical
protein T27E7.6 protein.
Length = 418
Score = 29.5 bits (63), Expect = 8.0
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 335 ETQDKVDGQATECVKEMNEIVQS-NSESGSKHATPDSPGTPTHASASLSLSDGRDFFD-D 392
E + K D ++E+ + + + E +HA D + S + L +D F+ D
Sbjct: 44 ELKKKSDEAYNNDMEELKKTRSAFDQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRD 103
Query: 393 EIADQPALLFRIKTAKSRWKQLRDNHRDALKRQNATRSGQARKQRKEWKYQKAMSFLLPY 452
E + A+ ++ + K+LR R+A +R + + +E + +K ++
Sbjct: 104 EASHGMAMKMMVREHAEKMKELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMD 163
Query: 453 MCNRDGSSNFVTLD 466
R+GS ++
Sbjct: 164 AAKREGSMKIALVE 177
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 59 PPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTSLEEEKFVR 107
PP P+ KP +P+ T S ST TRP T T+L E+ +R
Sbjct: 201 PPPPMPGKPPIVPQSPTTTTSTTSTTT--TTATRPPTTTTTLSYEERMR 247
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 59 PPSPILPKPIQIPEFEQTQNSHMSTLDRYRNRTRPSTIQTSLEEEKFVR 107
PP P+ KP +P+ T S ST TRP T T+L E+ +R
Sbjct: 201 PPPPMPGKPPIVPQSPTTTTSTTSTTT--TTATRPPTTTTTLSYEERMR 247
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 29.5 bits (63), Expect = 8.0
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 552 ANDKYDEIDLFFFNLAASTKKLPYYLQLEIKRKCFNAVMSAEESNLQHSW-HSPNNYGYS 610
AN+ ++ +D+F + ++Q + + V A + S S +N S
Sbjct: 1283 ANNHHNIVDIFDRCRPEREYSMDLHIQHTHQPQPSRKVTRAPKKQTSRSKKESASNSRDS 1342
Query: 611 TDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGPNEKCG 666
T TP P + +TS TPS + NT+ TP+ S + + +T A +CG
Sbjct: 1343 THLTPPPSDGSTS--TPSPQHFMNTTHTTPT-SLNYLSPEYQTEAGSSEAFQPQCG 1395
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 29.5 bits (63), Expect = 8.0
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 552 ANDKYDEIDLFFFNLAASTKKLPYYLQLEIKRKCFNAVMSAEESNLQHSW-HSPNNYGYS 610
AN+ ++ +D+F + ++Q + + V A + S S +N S
Sbjct: 1283 ANNHHNIVDIFDRCRPEREYSMDLHIQHTHQPQPSRKVTRAPKKQTSRSKKESASNSRDS 1342
Query: 611 TDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQTTQDIETSAAEQTGPNEKCG 666
T TP P + +TS TPS + NT+ TP+ S + + +T A +CG
Sbjct: 1343 THLTPPPSDGSTS--TPSPQHFMNTTHTTPT-SLNYLSPEYQTEAGSSEAFQPQCG 1395
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 604 PNNYGYSTDSTPTPDNINTSIDTPS-APN-DSNTSINTPSASKVQTTQDIETSAAEQTGP 661
P GYS T T + ++ P+ AP + T+ T + + + ETS E + P
Sbjct: 458 PYRRGYSIIDTTTMEPVDEITQKPTEAPTTEEPTTTTTEEPTTPEASTSSETSTTENSEP 517
Query: 662 NEK 664
N+K
Sbjct: 518 NQK 520
>AF077544-1|AAK39241.2| 231|Caenorhabditis elegans Hypothetical
protein H22K11.3 protein.
Length = 231
Score = 29.5 bits (63), Expect = 8.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 600 SWHSPNNYGYSTDSTPTPDN 619
+W+ PN+ GYS P PDN
Sbjct: 71 NWNGPNSNGYSGPQQPPPDN 90
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 610 STDSTPTPDNINTSIDTPSAPNDSNTSINTPSASKVQT-TQDIETSAAEQTGP 661
++ STP P N+ T T AP +S T N P+A+ +T +Q + +S + + P
Sbjct: 241 ASTSTPAPTNLPT---TTGAPTNSTT--NPPTATSPKTSSQPVSSSTSSTSSP 288
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 8.0
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 356 QSNSESGSKHATPDSPGTPTHASASLSLSDGRDFFDDEI-ADQPALLFRIKTAKSRWKQL 414
Q+ S + S H P SP P SA +L F+ E+ D+ L ++ + +++
Sbjct: 387 QTPSPAPSSHIIPSSPLIPPTPSACNTLERRSRAFEHEMPEDRETALEKLNRSLHNRREM 446
Query: 415 RDNHRDALKRQNATRSGQARKQRKE 439
+ +R+ A R + + R++
Sbjct: 447 EKQKAEEARRKEAERIEEIERMRQQ 471
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.309 0.125 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,783,185
Number of Sequences: 27539
Number of extensions: 594680
Number of successful extensions: 2772
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 2618
Number of HSP's gapped (non-prelim): 179
length of query: 668
length of database: 12,573,161
effective HSP length: 86
effective length of query: 582
effective length of database: 10,204,807
effective search space: 5939197674
effective search space used: 5939197674
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 63 (29.5 bits)
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