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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002432-TA|BGIBMGA002432-PA|IPR002490|ATPase, V0/A0
complex, 116-kDa subunit
         (836 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0)                 672   0.0  
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)                    35   0.23 
SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.95 
SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3)                    33   1.3  
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   1.3  
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   1.3  
SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)                   33   1.3  
SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)                   33   1.3  
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)                 33   1.3  
SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5)                      33   1.3  
SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)                 33   1.3  
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   1.3  
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)          33   1.3  
SB_9562| Best HMM Match : TetR_C (HMM E-Value=4)                       33   1.3  
SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)                32   2.2  
SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)                32   2.2  
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)                31   2.9  
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   3.8  
SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)                 31   3.8  
SB_36445| Best HMM Match : ASC (HMM E-Value=5.6e-05)                   31   5.0  
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   5.0  
SB_19641| Best HMM Match : 7tm_1 (HMM E-Value=0.0034)                  31   5.0  
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)                     30   6.7  
SB_29212| Best HMM Match : 7tm_1 (HMM E-Value=0.0033)                  30   8.8  

>SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0)
          Length = 1128

 Score =  672 bits (1660), Expect = 0.0
 Identities = 341/676 (50%), Positives = 452/676 (66%), Gaps = 36/676 (5%)

Query: 141 EEIGMDSLTKSLISDETGQQAATRGRLGFVAGVVQRERVPAFERMLWRISRGNVFLRRAE 200
           +E G    T  L+ +E    +A   +LGFV+GV+ RE+VP+FER+LWR  RGNVF ++AE
Sbjct: 175 QEPGRTDDTVQLLGEEPSAASAAT-QLGFVSGVISREKVPSFERLLWRACRGNVFFKQAE 233

Query: 201 LDKPLEDPATGNEIYKTVFVAFFQGEQLKSRIKKVCTGFHASLYPCPPSNTERQDMVKGV 260
           +++ LEDP+TG++++K VF+ FFQG+QLKSR+KK+C GF ASLYPCP +  ER+++  GV
Sbjct: 234 IEEALEDPSTGDQVHKCVFIIFFQGDQLKSRVKKICEGFRASLYPCPETAAERREVAIGV 293

Query: 261 RTRLEDLNMVLNQTRDHRQRVLASVAKELTSWTIMVRKMKAIYHTLNLFNMDVTKKCLIG 320
            TR+EDL  VL+QT+DHR R+L +VA  ++ W I V+K+KAIYHT+N+FN+DVT+KCLI 
Sbjct: 294 ETRIEDLQNVLSQTKDHRYRLLGTVANNISQWFIKVKKIKAIYHTMNMFNLDVTQKCLIA 353

Query: 321 ECWVPTADLPNVQKALADGSNACGSSIPSFLNCIETDEEPPTFNRTNKFTRGFQNLIDAY 380
           ECW P ADL  +Q AL  G+   G+S+PS LN + T + PPTFNRTNKFT+GFQ ++DAY
Sbjct: 354 ECWCPVADLDRIQAALRRGTEHSGASVPSILNRMVTRQAPPTFNRTNKFTQGFQAIVDAY 413

Query: 381 GVASYRECNPALYTIITFPFLFAVMFGDLGHGCIMAMFGGWMVVKEVSLAAKKSNNEIWN 440
           GVA+Y+E NPALYTIITFPFLFAVMFGD GHG IMAMF  ++V+KE  L   K   E++ 
Sbjct: 414 GVANYQEVNPALYTIITFPFLFAVMFGDCGHGFIMAMFALYLVLKEDKLKNFKGGGEMFE 473

Query: 441 IFFAGRYIILLMGCFSMYTGLVYNDIFSKSLNIFGSSWHIP-----YDNHTL---AENGA 492
             F GRYI+LLMG F++YTGL+YNDIFS+SLNIFG+ W  P     Y +  +    ++  
Sbjct: 474 TIFHGRYIVLLMGLFAVYTGLIYNDIFSRSLNIFGTGWAFPNNTGEYSSAAMKSYPKDKI 533

Query: 493 LTLDPKDAYTEVPYFIGIDPIWQSADNKIIFLNSYKMKLSIIFGVIHMIFGVCMSVVNYN 552
           L LDPK  Y+ +PY+ G+DPIWQ A NK+ F NS KMKLSI+ GVIHM+FGVC+S     
Sbjct: 534 LMLDPKVGYSGIPYYFGLDPIWQVAKNKLNFTNSLKMKLSIVLGVIHMMFGVCLS----- 588

Query: 553 FFKRRYSIFLEFLPQIVXXXXXXXXXXXXXXXKWIAYSTKNDELAYTQGCAPSVLILFIN 612
           FF  RY          +               + +     N  +A       + + +F+ 
Sbjct: 589 FFNHRY----------IKTQSSYDTKQWGHGNRVVLRRIGNRGIAKPPSLLIATINMFLQ 638

Query: 613 MMLFSKNVPEEGCKEFMFDAQSDIQRVFVFIALLCIPVMLLGKPLYLL-ATKKNNPKPEH 671
              F+K++     K+ +F  Q+ IQ + V IA+LC+P MLL KP YL    KK+  +   
Sbjct: 639 ---FAKDIEP---KDQVFSGQAVIQPLLVVIAVLCVPWMLLVKPFYLRHQHKKHKLEGFQ 692

Query: 672 SNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDE--PFSEIMIHQAIHTIEYVLSTI 729
             GS +    +QE+    +V    E      +DHE+E   F E  +HQAIHTIEY L  I
Sbjct: 693 RLGSPS---NIQEEHQPQEVSHSEEFAKPQENDHEEEEFDFGEAFVHQAIHTIEYCLGCI 749

Query: 730 SHTASYLRLWALSLAHAELSEVLWNMVLTFGLKDHNYVGAIKLYVAFCFWALFTLAILVM 789
           S+TASYLRLWALSLAHAELSEVLW+MVL  GL     +G I  ++ F  WA+ T+AIL++
Sbjct: 750 SNTASYLRLWALSLAHAELSEVLWSMVLHLGLNKEGAMGIIVTFLGFGLWAVLTIAILLI 809

Query: 790 MEGLSAFLHTLRLHWV 805
           MEGLSAFLH LRLHW+
Sbjct: 810 MEGLSAFLHALRLHWL 825



 Score = 93.1 bits (221), Expect = 8e-19
 Identities = 48/97 (49%), Positives = 69/97 (71%), Gaps = 3/97 (3%)

Query: 7   SEEMALCQLFIQPEAAYTSVSELGE-AGSVQFRD-LNPDVNAFQRKFVNEVRRCDEMERK 64
           ++E+ +  +F++ ++ Y S    GE  GS   R  LNPDVNAFQRKFVNEVRRC+EMERK
Sbjct: 72  AKELLIGCMFLR-DSVYFSAEFYGEFEGSYVIRQSLNPDVNAFQRKFVNEVRRCEEMERK 130

Query: 65  LRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAKK 101
           LR+++ E+ K  + +    E+  AP+PRE+IDLEA++
Sbjct: 131 LRFLQKEIEKAEIAMVDTGESSEAPHPREMIDLEAEQ 167


>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
          Length = 837

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 48  QRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           Q K   +  +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 277 QEKMXAQREKCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 330


>SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score = 33.1 bits (72), Expect = 0.95
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA---VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H PA   V+    AP+P+++  L A
Sbjct: 62  KCEFMQPSLKYLGHVIDKDGIH-PASDKVEAIKTAPSPQDVTQLRA 106


>SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3)
          Length = 327

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
          +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 50 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 94


>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 918

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 463 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 507


>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1735

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query: 673 NGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEPFSEIMIHQAIH 720
           +G  N+  ++ E   LGD QPK + + +   D E+E  S  M  +A H
Sbjct: 806 SGDGNESNDISESDGLGDTQPKNKGRPAKRLDDEEEEQSTAMAKRAKH 853


>SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)
          Length = 712

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 738 LWALSLAHAELSEVLWNMVLTFGLKDHNYVGAIKLYVAFC---FWALFTLAILVMMEGLS 794
           LWA+      L++  WN V+  G++  +Y  A+  ++A     ++ LF L + +++EG +
Sbjct: 363 LWAMVTVFQILTQENWNQVMFKGMRATSYWAAL-YFIALMTVGYYVLFNLLVAILVEGFT 421

Query: 795 A 795
           +
Sbjct: 422 S 422


>SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)
          Length = 1457

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 738 LWALSLAHAELSEVLWNMVLTFGLKDHNYVGAIKLYVAFC---FWALFTLAILVMMEGLS 794
           LWA+      L++  WN V+  G++  +Y  A+  ++A     ++ LF L + +++EG +
Sbjct: 620 LWAMVTVFQILTQENWNQVMFKGMRATSYWAAL-YFIALMTVGYYVLFNLLVAILVEGFT 678

Query: 795 A 795
           +
Sbjct: 679 S 679


>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
          Length = 1084

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 608 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 652


>SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5)
          Length = 296

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
          +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 29 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 73


>SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
          Length = 1122

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 642 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 686


>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1696

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 685 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 729


>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
          Length = 1217

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 415 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 459


>SB_9562| Best HMM Match : TetR_C (HMM E-Value=4)
          Length = 242

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 80  KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 124


>SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
          Length = 797

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L A
Sbjct: 497 KCEFMQPPLKYLGHIIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 541


>SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
          Length = 522

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA---VKEAPRAPNPREIIDLEA 99
           +C+ M+  L+Y+   + KDG+H PA   ++    AP+P+++  L A
Sbjct: 326 KCEFMQPSLKYLGHVIDKDGIH-PASDKLETIKTAPSPQDVTQLRA 370


>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
          Length = 482

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 663 KKNNPKPEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEP 709
           KK+ PKP+ S G + +     ++++    + +P+AK S G   +DEP
Sbjct: 187 KKDEPKPKKSKGPIKKDEPKAKKSEGPMKKDEPKAKKSEGPMKKDEP 233


>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2309

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDL 97
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L
Sbjct: 536 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQL 578


>SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)
          Length = 877

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 57  RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDL 97
           +C+ M+  L+Y+   + KDG+H  +  V+    AP+P+++  L
Sbjct: 319 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQL 361


>SB_36445| Best HMM Match : ASC (HMM E-Value=5.6e-05)
          Length = 897

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 260 VRTRLEDLNMVLNQTRDHRQRVLASVAKEL-TSWTIMVRKMKAIYHTLN 307
           +R  LED ++V ++ R+H Q   A++ K++ T +   + ++KA+Y  L+
Sbjct: 99  LRKILEDCSLVPSEEREHFQEFSAALDKKISTKYHAEISELKALYEPLH 147


>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1338

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 22/214 (10%)

Query: 46  AFQRKFVNEVRRCDEMERKLRYIE---AEVHKDGVHI-PAVKEAPRAPNPREIIDLEAKK 101
           A +++    +R+  +++R+L+ +E   AEV KDGV I  A++    + +  + + +E  K
Sbjct: 720 AMKQRESKRLRQAQQIQRELQELEVKQAEVEKDGVVIEKAIRSGELSKSEEQKMMMEWFK 779

Query: 102 ---TENEILELSHNAVNLKQNYLEL--------TELRHVLEKTEAFFTAQEEIGMDSLTK 150
               +N ++      V +  NY++L         E+R +L K  +  T Q++I +   TK
Sbjct: 780 IINRKNAMIRYESELV-IHANYIQLEDQQGRLEQEIRELLMKEAS--TEQDQIEIQLKTK 836

Query: 151 SLISDETGQQAATRGRLGFVAGVVQRERVPAFERML-WRISRGNVFLRRAELDKPLEDPA 209
            L+ D  GQ+      L       ++E   AFE ML  +++  ++ L +  +++PL+  +
Sbjct: 837 ELV-DIVGQRNNLVELLD-EDRKREQEEDKAFESMLAAKVATSDLSLLKV-INRPLQQSS 893

Query: 210 TGNEIYKTVFVAFFQGEQLKSRIKKVCTGFHASL 243
             N          F+ + L S  +    GF+  +
Sbjct: 894 GINLSQLIEREVLFRTKTLTSTDRTRSLGFYPEI 927


>SB_19641| Best HMM Match : 7tm_1 (HMM E-Value=0.0034)
          Length = 214

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 433 KSNNEIWNIFFAGRYIILLMGCF--SMYTGLVYNDIFS-KSLNIFGSSWHIPYDNHTLAE 489
           +   ++WN+ F G  +++   CF  S+Y G+V   +F   S  + G+S  I Y  ++ A 
Sbjct: 122 RGKRKVWNVHFVGVLVVIFNICFFLSIYKGVVNYILFEFVSKEVVGAS-RILYHLNS-AA 179

Query: 490 NGAL 493
           NGA+
Sbjct: 180 NGAV 183


>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
          Length = 1691

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 59  DEMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAKKTENEILELSHNAVNLKQ 118
           DE+ RKL ++  E+ ++ V++  ++   ++   R + + E +K   ++ EL       KQ
Sbjct: 49  DELRRKLVHLNKELDQERVYVKQLRR-EKSVELRHLREDEQRKASTQLTELRSKLHKEKQ 107

Query: 119 NYLELTELRHVLEK 132
           N  ELT  +  L +
Sbjct: 108 N--ELTAQKEQLHR 119


>SB_29212| Best HMM Match : 7tm_1 (HMM E-Value=0.0033)
          Length = 214

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 437 EIWNIFFAGRYIILLMGCF--SMYTGLVYNDIFS-KSLNIFGSSWHIPYDNHTLAENGAL 493
           ++WN+ F G  +++   CF  S+Y G+V   +F   S  + G+S  I Y  ++ A NGA+
Sbjct: 126 KVWNVHFVGVLVVIFNICFFLSIYKGVVNYILFEFVSKEVVGAS-RILYHLNS-AANGAV 183


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.323    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,180,408
Number of Sequences: 59808
Number of extensions: 1115434
Number of successful extensions: 2484
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2470
Number of HSP's gapped (non-prelim): 34
length of query: 836
length of database: 16,821,457
effective HSP length: 88
effective length of query: 748
effective length of database: 11,558,353
effective search space: 8645648044
effective search space used: 8645648044
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 64 (29.9 bits)

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