GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002431-TA|BGIBMGA002431-PA|IPR007371|Thiamin
pyrophosphokinase, catalytic region, IPR007373|Thiamin
pyrophosphokinase, vitamin B1-binding region
         (128 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   2.8  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    21   2.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   2.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 76  ETLQKYKKKGYNQSLKFGELVSTSNAFDGSD 106
           E + K++  G+   ++F   +S  NAF G +
Sbjct: 247 EAISKHEYTGFGTVIEFQYGLSLGNAFQGGN 277


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 76  ETLQKYKKKGYNQSLKFGELVSTSNAFDGSD 106
           E + K++  G+   ++F   +S  NAF G +
Sbjct: 248 EAISKHEYTGFGTVIEFQYGLSLGNAFQGGN 278


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 76  ETLQKYKKKGYNQSLKFGELVSTSNAFDGSD 106
           E + K++  G+   ++F   +S  NAF G +
Sbjct: 248 EAISKHEYTGFGTVIEFQYGLSLGNAFQGGN 278


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 64 DLITGDFDSITEETLQKYKKKGYNQSLKF 92
          DL+  DF  +    L   K K Y+   KF
Sbjct: 37 DLLVNDFFKVKPSALVSVKCKPYHVGSKF 65


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 101

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 64 DLITGDFDSITEETLQKYKKKGYNQSLKF 92
          DL+  DF  +    L   K K Y+   KF
Sbjct: 52 DLLVNDFFKVKPSALVSVKCKPYHVGSKF 80


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 64  DLITGDFDSITEETLQKYKKKGYNQSLKF 92
           DL+  DF  +    L   K K Y+   KF
Sbjct: 270 DLLVNDFFKVKPSALVSVKCKPYHVGSKF 298


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 64  DLITGDFDSITEETLQKYKKKGYNQSLKF 92
           DL+  DF  +    L   K K Y+   KF
Sbjct: 270 DLLVNDFFKVKPSALVSVKCKPYHVGSKF 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 69   DFDSITEETLQKYKKKGYNQSLKFG 93
            DFD+   + +  YK KG   SL  G
Sbjct: 1452 DFDNQFYKRVTGYKAKGIKVSLALG 1476



 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 69   DFDSITEETLQKYKKKGYNQSLKFG 93
            DFD+   E +  YK KG    +  G
Sbjct: 1877 DFDNKFYEKVTAYKSKGIKVLVAIG 1901


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.133    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,624
Number of Sequences: 317
Number of extensions: 1139
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 128
length of database: 114,650
effective HSP length: 50
effective length of query: 78
effective length of database: 98,800
effective search space:  7706400
effective search space used:  7706400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)