Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002431-TA|BGIBMGA002431-PA|IPR007371|Thiamin
pyrophosphokinase, catalytic region, IPR007373|Thiamin
pyrophosphokinase, vitamin B1-binding region
(128 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 58 3e-10
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 28 0.40
SPBC3B9.17 |isa2||iron-sulfur protein Isa2|Schizosaccharomyces p... 27 1.2
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 27 1.2
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 1.6
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 1.6
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 26 1.6
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 25 4.9
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 25 4.9
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 24 6.5
SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces ... 24 8.6
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 24 8.6
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 24 8.6
SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces pombe... 24 8.6
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 58.4 bits (135), Expect = 3e-10
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 8 RYAVLILNRPISQEEAFMKNFWEKATLRITVDGGALRWDQFLTRLPEEISNKMKIPDLIT 67
++AVL+LN+PI + + W++A++R+ DGGA + + + L PD +
Sbjct: 352 KFAVLLLNQPIDIPDDRFRTLWKRASIRVCADGGANQLRNYDSSLK---------PDYVV 402
Query: 68 GDFDSITEETLQKYKKKGYN 87
GDFDS+T+ET YK+ G N
Sbjct: 403 GDFDSLTDETKAYYKEMGVN 422
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 28.3 bits (60), Expect = 0.40
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 44 RWDQFLTRLP-EEISNKMKIPDLITGDFDSITEETLQKYKKKGY 86
+W Q L++L ++I N +PD+++ D+++ T + ++ K Y
Sbjct: 234 QWIQRLSQLQGQKIDNSESLPDILSITLDNLSHPTDEYFEAKAY 277
>SPBC3B9.17 |isa2||iron-sulfur protein Isa2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 205
Score = 26.6 bits (56), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 30 EKATLRITVDGGALRWDQFLTRLPEEISN 58
E + LR+TVDGG Q R+ +I N
Sbjct: 118 ENSVLRVTVDGGGCHGYQVSFRMDNKIGN 146
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 26.6 bits (56), Expect = 1.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 54 EEISNKMKIPDLITGDFDSITEETLQKYKKK 84
EE K K D ++G F+ +T++ ++Y KK
Sbjct: 540 EEQRRKKKEQDRLSGKFEKMTQKEREQYAKK 570
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.2 bits (55), Expect = 1.6
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 55 EISNKMKIPDLITGDFDSITEETLQKYKKKGYNQSLKFGELVSTSNAFDGS---DTVKIK 111
+++ ++ D + G + + T+ET +++KK ++L+ + + N F+ + + V IK
Sbjct: 128 QVATSPQLMDFMKGFYVTYTKETAREFKKAFKERNLESMDYLMRHNEFNDAIDLNEVDIK 187
Query: 112 CSHTIL 117
T L
Sbjct: 188 TGQTYL 193
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 1.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 53 PEEISNKMKIPDLITGDFDSITEETLQKYKKKG 85
P +S K K L TGD ++ E+T ++ KG
Sbjct: 19 PSVLSLKSKFESLSTGDLTNLDEKTAKRRTVKG 51
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 26.2 bits (55), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 18 ISQEEAFMKNFWEKATLRITVDGGALRWDQ 47
I QEE F K +WE+ +LR+ + G L+ ++
Sbjct: 1264 IQQEEEFQK-WWEEESLRVQKELGILKTER 1292
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 24.6 bits (51), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 69 DFDSITEETLQKYKKKGYNQSLKF 92
DF +T TL +Y ++ Y + LKF
Sbjct: 110 DFGRVTTRTLGEYLRERYVKQLKF 133
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 24.6 bits (51), Expect = 4.9
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 65 LITGDFDSITEETLQKYKKKGYNQSLKFGELVSTSNAFDGSDTVK 109
L TG+FD I L ++K G +K LV S AFDG+ TVK
Sbjct: 298 LATGNFDEIAHAMLSIFEKHG----VKCRYLV-LSPAFDGA-TVK 336
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 24.2 bits (50), Expect = 6.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 44 RWDQFLTRLPEEISNKMKIPD 64
+WD+FLT LP I+ + P+
Sbjct: 102 KWDKFLTVLPLSINTPAQWPE 122
>SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 246
Score = 23.8 bits (49), Expect = 8.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 21 EEAFMKNFWEKATLRITVDGGALRWDQFLTRLPEEISNKMKIPDLITGDFDSITEETLQK 80
E + KNF +K L I V G L E++ ++ PD+ T ++ SI+EE + +
Sbjct: 99 EWSLFKNFIDKLQLEIPVIG--------LHMSDEKL---LEPPDVFTPEYISISEEGVNE 147
Query: 81 YKKK 84
+ +K
Sbjct: 148 FNEK 151
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 23.8 bits (49), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 60 MKIPDLITGDFDSITEETLQKYKKKG 85
+KIP LI GDF+S+ + + G
Sbjct: 549 LKIPILICGDFNSVQGSGVYDFLSSG 574
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 23.8 bits (49), Expect = 8.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 82 KKKGYNQSLKFGELVSTSNAFDGSD 106
K GY++ ++ G L S + A +GSD
Sbjct: 297 KVPGYDEPVEVGVLTSIAYAVEGSD 321
>SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 523
Score = 23.8 bits (49), Expect = 8.6
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Query: 82 KKKGYNQSLKF-------GELVSTSNAFDGSDTVKIKC 112
+K G N KF GEL+ SNA DT +C
Sbjct: 471 RKPGINYGRKFWICARPVGELIKNSNAVSEEDTQPFQC 508
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,856
Number of Sequences: 5004
Number of extensions: 22803
Number of successful extensions: 73
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 14
length of query: 128
length of database: 2,362,478
effective HSP length: 65
effective length of query: 63
effective length of database: 2,037,218
effective search space: 128344734
effective search space used: 128344734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)
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