GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002430-TA|BGIBMGA002430-PA|IPR007114|Major facilitator
superfamily, IPR005988|Synaptic vesicle protein SV2, IPR011701|Major
facilitator superfamily MFS_1
         (536 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    27   0.25 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    27   0.25 
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    25   1.00 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   7.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   7.0  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 319 LKYTILTCLIQFGLTTSYYTLMIWF 343
           LK TI+  L+ F   T YY + IW+
Sbjct: 274 LKMTIIIVLVFFVCWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 319 LKYTILTCLIQFGLTTSYYTLMIWF 343
           LK TI+  L+ F   T YY + IW+
Sbjct: 274 LKMTIIIVLVFFVCWTPYYVMCIWY 298


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 25.4 bits (53), Expect = 1.00
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 321 YTILTCLIQFGLTTSYYTLMIWFP 344
           Y+ L C IQF  +  YY + I+ P
Sbjct: 54  YSRLACEIQFVRSMGYYLIQIYIP 77


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 216 CGVPSLLLGFWLFSFPESPKFMMECGDYDDALKCLKSVYRQNTGDDPDNYPIKSLK 271
           C +P  +   W+   PE   + +E   Y + L   + +   N+  +P  Y + S K
Sbjct: 302 CLIPFRVFILWIILVPEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLMSSK 357


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 190 GIIPIQGIRVESGAFSYDSWNWFVAACGVPSLLL 223
           G+I  +GIR E   F ++  +   AA G   ++L
Sbjct: 295 GLIDDEGIREEVDTFMFEGHDTTAAALGFALMVL 328


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 190 GIIPIQGIRVESGAFSYDSWNWFVAACGVPSLLL 223
           G+I  +GIR E   F ++  +   AA G   ++L
Sbjct: 295 GLIDDEGIREEVDTFMFEGHDTTAAALGFALMVL 328


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.143    0.460 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,421
Number of Sequences: 317
Number of extensions: 5068
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 6
length of query: 536
length of database: 114,650
effective HSP length: 60
effective length of query: 476
effective length of database: 95,630
effective search space: 45519880
effective search space used: 45519880
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 45 (22.2 bits)