Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002429-TA|BGIBMGA002429-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(165 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 248 4e-67
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 208 3e-55
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 184 4e-48
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 184 8e-48
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 151 7e-38
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 122 4e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 109 2e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 88 5e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 62 4e-11
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 1.4
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 25 4.3
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 25 4.3
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 5.7
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 5.7
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.5
SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24 |Schiz... 25 7.5
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 24 9.9
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 248 bits (606), Expect = 4e-67
Identities = 113/158 (71%), Positives = 125/158 (79%)
Query: 7 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 66
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 67 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRH 126
FT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNGSQFFITTV T WLDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 127 VVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 164
VVFG V EGM+VVK++E+ GS SG T RIVI CG +
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 208 bits (508), Expect = 3e-55
Identities = 94/137 (68%), Positives = 109/137 (79%)
Query: 6 VFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 65
V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRVIPNFM+QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 66 DFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGR 125
D T +GTGGKSIYG++F DENF L H PG+LSMANAG D+NGSQFFITTVKT WLDG
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGH 148
Query: 126 HVVFGNVVEGMEVVKQI 142
HVVFG V+ G ++VK+I
Sbjct: 149 HVVFGEVLSGYDIVKKI 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 184 bits (449), Expect = 4e-48
Identities = 89/169 (52%), Positives = 115/169 (68%), Gaps = 8/169 (4%)
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 57
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 58 PNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGILSMANAGADTNGSQFFITT 116
FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 117 VKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 164
V +LDG+HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 184 bits (447), Expect = 8e-48
Identities = 90/160 (56%), Positives = 111/160 (69%), Gaps = 4/160 (2%)
Query: 7 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 62
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 63 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWL 122
QGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 123 DGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 162
DG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 151 bits (365), Expect = 7e-38
Identities = 75/127 (59%), Positives = 94/127 (74%), Gaps = 5/127 (3%)
Query: 17 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 76
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 77 SIYGNKFEDE-NFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 135
SIYG+KF+DE + L HTG GILSMANAG +TN SQFFIT T WLDG+H +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 136 MEVVKQI 142
+ V K++
Sbjct: 126 LSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 122 bits (293), Expect = 4e-29
Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 18 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 77
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 78 IYGNKFEDE-NFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 136
I+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 137 EVVKQIE 143
+VV +IE
Sbjct: 580 DVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 109 bits (263), Expect = 2e-25
Identities = 62/138 (44%), Positives = 82/138 (59%), Gaps = 5/138 (3%)
Query: 18 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 77
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 78 IYGNKFEDENFT-LKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 136
I+G F+DE LKH GI+SMAN G +TNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 137 EVVKQIETFGSQSGKTSK 154
V+ +E + S K
Sbjct: 401 NVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 88.2 bits (209), Expect = 5e-19
Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 18 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 77
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 78 IYGNKFEDENF-TLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 133
IYG F E L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 62.1 bits (144), Expect = 4e-11
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 14 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 73
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 74 GGKSIY-----GNKFEDENF--TLKHTGPGILSMANAGADTN-------GSQFFIT-TVK 118
GG+ ++ G +F F +L H G++SM+ A + GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 119 TSWLDGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 159
LD R+ ++G V EG + + +I + + G+ + I IK
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIK 164
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 1.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 10 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 41
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 4.3
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 62 LQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGIL 98
L+G +N +G GK I+G K D T + T PG +
Sbjct: 355 LRGAYPSNDSGISGKGIFGLKKNDPRITSMVLTDPGFV 392
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 4.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 66 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGILSMANAGADTNGSQFFI 114
D + T KS+YG +D+N F + T ++ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 25.0 bits (52), Expect = 5.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 62 LQGGDFTNHNGTGGKSI-YGNKFEDENFTLKHTGPGILSMANAGADTN--GSQFFITT 116
L G + N+N G S +G+ F + TG G+ + A TN G+ F+++
Sbjct: 113 LFGSNTANNNANTGTSFSFGSNAGSTGFGSQGTGGGLFGSSTTPATTNAFGTSGFVSS 170
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.0 bits (52), Expect = 5.7
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 19 KIVIELRSDVTPKTC-ENFRAL 39
++++ L SD+ PK C NF+AL
Sbjct: 1135 QLMLRLHSDIYPKICISNFKAL 1156
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 24.6 bits (51), Expect = 7.5
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 104 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 136
G TNG F + + ++W + + + +G+ +E +
Sbjct: 531 GVKTNGRPFGLGIMHSAWQEPQLIKYGSAIEDL 563
>SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 24.6 bits (51), Expect = 7.5
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 50 GSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTN 108
G I H+ +PN M Q + G Y + + E+ + G++ +++ D N
Sbjct: 67 GQIMHQEVPNSMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHGVIYISDEDLDAN 125
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 24.2 bits (50), Expect = 9.9
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 67 FTNHNGTGGKSIYGNKFEDENF-TLKHTGPG--ILSMANAGADTNG 109
F N NG G +S ++ +D N+ T++ G L++ A + T G
Sbjct: 369 FGNENGVGEESEMESEIDDRNYETMEEEADGETPLAIVKASSGTKG 414
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.139 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,860
Number of Sequences: 5004
Number of extensions: 34825
Number of successful extensions: 72
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 17
length of query: 165
length of database: 2,362,478
effective HSP length: 68
effective length of query: 97
effective length of database: 2,022,206
effective search space: 196153982
effective search space used: 196153982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)
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