Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002429-TA|BGIBMGA002429-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(165 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 270 4e-73
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 257 3e-69
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 8e-52
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 1e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 97 5e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 92 2e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 88 3e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 87 9e-18
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 78 4e-15
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 52 2e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 39 0.002
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.007
SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035) 30 0.83
SB_49435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 27 5.8
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 27 5.8
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 270 bits (662), Expect = 4e-73
Identities = 117/162 (72%), Positives = 138/162 (85%)
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQ 63
PRVFFD+T+ + G+IV+ELRSDV P T ENFR LCT EKGFGYKGS FHR+IP FM Q
Sbjct: 137 PRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQ 196
Query: 64 GGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLD 123
GGDFT HNGTGGKSIYG KFEDENF LKHTG G+LSMAN+G +TNGSQFF+TT KT WLD
Sbjct: 197 GGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLD 256
Query: 124 GRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 165
G+HVVFGNV+EG +VV+++E GSQSGK SK++VI DCG+++
Sbjct: 257 GKHVVFGNVIEGFDVVRKMEAVGSQSGKASKKVVIDDCGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 257 bits (630), Expect = 3e-69
Identities = 116/158 (73%), Positives = 131/158 (82%)
Query: 7 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 66
+FD+ + AP G+IV+ELR DV PKT ENFRALCTGEKGFGYKGS FHRVIP FM QGGD
Sbjct: 6 YFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGD 65
Query: 67 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRH 126
FT +GTGGKSIYG KF DENF LKHTGPGILSMANAG TNGSQFF+ T KTSWLDG+H
Sbjct: 66 FTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKH 125
Query: 127 VVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 164
VVFG+V +GM+VVK+IE GS SGKTSK++VI D +
Sbjct: 126 VVFGSVKDGMDVVKKIEKVGSDSGKTSKKVVIADSASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 199 bits (486), Expect = 8e-52
Identities = 89/139 (64%), Positives = 108/139 (77%)
Query: 5 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 64
+V+ DV++ P G++++ L D PKT NF AL E+GFGYK SIFHRVI NFM+QG
Sbjct: 27 KVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQG 86
Query: 65 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDG 124
GDFTN +GTGG SIYG F+DENF LKH GPG L MANAG +TNGSQF+ITT+KTSWLDG
Sbjct: 87 GDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDG 146
Query: 125 RHVVFGNVVEGMEVVKQIE 143
H FG V+EGM+VV++IE
Sbjct: 147 SHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 169 bits (410), Expect = 1e-42
Identities = 90/152 (59%), Positives = 105/152 (69%), Gaps = 18/152 (11%)
Query: 5 RVFFDVTVDDAPLGKI------VIELRSDVTPKTCE-----NFRAL-----CT--GEKGF 46
+VFFD+T+ G+I +I+ + + E NFR CT +KGF
Sbjct: 28 KVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKGF 87
Query: 47 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGAD 106
GYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G LSMANAG D
Sbjct: 88 GYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGKD 147
Query: 107 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 138
TNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 148 TNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.5 bits (232), Expect = 5e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 71 NGTGGKSIYGNKFEDE-NFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVF 129
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 130 GNVVEGMEVVKQI 142
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 91.9 bits (218), Expect = 2e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Query: 91 KHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 150
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 151 KTSKRIVIKDCGQIA 165
+I++CG++A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 100 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIK 159
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 160 DCGQI 164
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 88.2 bits (209), Expect = 3e-18
Identities = 38/91 (41%), Positives = 57/91 (62%)
Query: 72 GTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 131
G GG+S+YG FEDE+F++ H G++ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 132 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 162
V+EG+ V+ +E + + + + DCG
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCG 136
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 86.6 bits (205), Expect = 9e-18
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 11/95 (11%)
Query: 71 NGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 130
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 131 NVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 164
+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.8 bits (183), Expect = 4e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 97 ILSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 142
ILSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 64.1 bits (149), Expect = 6e-11
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 17 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 76
LG+I IEL +D P + NF A + G+ Y G+ FHRVIP FM+QGG F + +
Sbjct: 32 LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGF---DADMQQ 85
Query: 77 SIYGNKFEDENFTLKHTGPGILSMANAGA-DTNGSQFFITTVKTSWLDG-----RHVVFG 130
++E H G L+MA D+ SQFFI ++LD + VFG
Sbjct: 86 KDTQAPIKNEADNGLHNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFG 145
Query: 131 NVVEGMEVVKQI 142
VV+GM+VV +I
Sbjct: 146 KVVKGMDVVDKI 157
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 18 GKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 55
G+++ EL +D PKT ENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 92 HTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 130
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 17 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 76
+G I IEL TPK C NF LC +G+ Y +IFHR++ +GG+ N G G
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGF 61
Query: 77 SIYGN 81
+ GN
Sbjct: 62 KVTGN 66
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 126 HVVFGNVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 164
HVVFG+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035)
Length = 885
Score = 30.3 bits (65), Expect = 0.83
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 15 APLGKIVIELRSDVTPKTCENFRALCTG 42
AP I+I L S V+PKT E+ R LC G
Sbjct: 569 APKIDIIIALDSGVSPKTFEDERQLCAG 596
>SB_49435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 53 FHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAG--ADTNGS 110
F R+I N M + N+N TG + + E E F GI +MA+A T S
Sbjct: 11 FARIISNQMRK----ENYNATGSSVLQNERLEKEEFKAGQPS-GIFNMASAAFLLFTPKS 65
Query: 111 QFFITTVKTS 120
QF + KT+
Sbjct: 66 QFGVLQAKTA 75
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 35 NFRALCTGEKGFGYKGSIF 53
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 35 NFRALCTGEKGFGYKGSIF 53
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 65 GDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGILSMANAGADTNGSQFFITTVKTSWLD 123
G T GTGG S N + T PG+ AN G S + ++ TSW +
Sbjct: 313 GAGTGGPGTGGPSGSSNPPTTGTPASASPTAPGVKGGANGGDCFRDSCYIFSSEGTSWTE 372
Query: 124 GR 125
R
Sbjct: 373 NR 374
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.139 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,012,687
Number of Sequences: 59808
Number of extensions: 262193
Number of successful extensions: 383
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 357
Number of HSP's gapped (non-prelim): 22
length of query: 165
length of database: 16,821,457
effective HSP length: 77
effective length of query: 88
effective length of database: 12,216,241
effective search space: 1075029208
effective search space used: 1075029208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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