GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002429-TA|BGIBMGA002429-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
         (165 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   2.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   2.8  
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    23   6.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   8.5  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 90  LKHTGPGILSMANAGADTNGSQFFITTVKTSWLDGRHV 127
           LK+ GPG+ ++A  G    GS+ F     +  L  R +
Sbjct: 100 LKNVGPGLKTLAAIGGWNEGSRKFSAMAASGELRKRFI 137


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 120  SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 154
            SWL   HV    V E   +V+    +GS S +T+K
Sbjct: 3198 SWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTK 3232


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 13/49 (26%), Positives = 18/49 (36%)

Query: 63  QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGADTNGSQ 111
           +GGD ++ N TG          D  F  +   PG  +    G    G Q
Sbjct: 26  RGGDGSSANSTGNSDNNSAGVPDFGFNSQSNVPGFGNGQQPGQQQQGQQ 74


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 42  GEKGFGYKGSIFHRVIPNFMLQGG 65
           G  G+G++GS+   + P   + GG
Sbjct: 127 GGGGYGHQGSMMRAMPPELGMYGG 150


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.139    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,726
Number of Sequences: 2123
Number of extensions: 8626
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 4
length of query: 165
length of database: 516,269
effective HSP length: 59
effective length of query: 106
effective length of database: 391,012
effective search space: 41447272
effective search space used: 41447272
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)