GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002428-TA|BGIBMGA002428-PA|undefined
         (915 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   1.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   3.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   3.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   3.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   9.4  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 475 LCYAINYCSTVNVWEYTFAPREYLHQHLET---RFSKALVGMVMFNQDTSEIAKPSELLV 531
           L Y +  C  ++   Y F PR YL + +     RF+K+++     N     + +  E+  
Sbjct: 217 LLYRLLRCWLISKCIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYT 276

Query: 532 SVR--AYMNVLQTVEN 545
             R  A +++L T +N
Sbjct: 277 GKRRLAMLDLLLTAKN 292


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 475 LCYAINYCSTVNVWEYTFAPREYLHQHLET---RFSKALVGMVMFNQDTSEIAKPSELLV 531
           L Y +  C  ++   Y F PR YL + +     RF+K+++     N     + +  E+  
Sbjct: 217 LLYRLLRCWLISKCIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYT 276

Query: 532 SVR--AYMNVLQTVEN 545
             R  A +++L T +N
Sbjct: 277 GKRRLAMLDLLLTAKN 292


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 126 KGYGKRISEVKDCYHHAVQKAGYKHRERRKFLRTALKELGLILTD 170
           +GY    S   D Y HA +     + +RR+++ + +  +  +L D
Sbjct: 850 RGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLLMD 894


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 126 KGYGKRISEVKDCYHHAVQKAGYKHRERRKFLRTALKELGLILTD 170
           +GY    S   D Y HA +     + +RR+++ + +  +  +L D
Sbjct: 850 RGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLLMD 894


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 126 KGYGKRISEVKDCYHHAVQKAGYKHRERRKFLRTALKELGLILTD 170
           +GY    S   D Y HA +     + +RR+++ + +  +  +L D
Sbjct: 850 RGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLLMD 894


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 126 KGYGKRISEVKDCYHHAVQKAGYKHRERRKFLRTALKELGLILTD 170
           +GY    S   D Y HA +     + +RR+++ + +  +  +L D
Sbjct: 850 RGYRVEYSAASDAYTHAPEGFNEFYNQRRRWVPSTIANIMDLLMD 894


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 33   VYNIKKACGDAKSKPAFLSDKALESSIKHI 62
            V N+ +  G  ++KP F  D+A +  +  I
Sbjct: 1372 VSNLAQTSGGGENKPIFYLDEAFQRRVTQI 1401


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 33   VYNIKKACGDAKSKPAFLSDKALESSIKHI 62
            V N+ +  G  ++KP F  D+A +  +  I
Sbjct: 1372 VSNLAQTSGGGENKPIFYLDEAFQRRVTQI 1401


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,316
Number of Sequences: 317
Number of extensions: 8114
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 10
length of query: 915
length of database: 114,650
effective HSP length: 63
effective length of query: 852
effective length of database: 94,679
effective search space: 80666508
effective search space used: 80666508
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 47 (23.0 bits)