Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002427-TA|BGIBMGA002427-PA|IPR006935|Type III
restriction enzyme, res subunit, IPR001650|Helicase, C-terminal,
IPR014001|DEAD-like helicases, N-terminal, IPR014021|Helicase
superfamily 1 and 2 ATP-binding
(1553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 318 3e-86
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 52 5e-06
09_02_0405 - 8597807-8598045,8599218-8599284,8599571-8599636,859... 49 3e-05
03_05_0155 - 21307001-21307239,21308217-21308320,21308564-213087... 49 3e-05
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 48 8e-05
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 47 1e-04
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 46 2e-04
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 46 3e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 44 0.001
04_04_0468 - 25447774-25447945,25449016-25449130,25449541-254498... 43 0.002
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 43 0.002
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 42 0.003
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 42 0.003
03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117... 40 0.012
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 39 0.028
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 39 0.036
06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194 38 0.048
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 38 0.064
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 38 0.084
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 38 0.084
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 38 0.084
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 37 0.11
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 37 0.15
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 37 0.15
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 37 0.15
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 36 0.19
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 36 0.26
08_01_0397 - 3509186-3510291,3510322-3512335 36 0.34
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 36 0.34
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 35 0.59
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 34 0.79
08_01_0315 - 2780657-2780704,2781555-2781608,2781826-2781976,278... 34 1.0
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 34 1.0
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 33 1.4
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 33 1.8
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 33 2.4
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 32 3.2
07_03_0922 - 22612773-22613321,22613616-22614189,22614389-226144... 32 3.2
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 32 3.2
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 32 3.2
11_06_0606 + 25432471-25432517,25433098-25433173,25433272-254334... 32 4.2
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 31 5.5
06_03_1255 + 28780181-28781172,28782065-28782932 31 5.5
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 31 7.3
03_02_0863 - 11889492-11889761,11890257-11890421,11890518-11890637 31 7.3
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 31 9.7
02_04_0307 - 21905897-21906490,21906581-21906722,21907116-219072... 31 9.7
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 31 9.7
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 31 9.7
01_05_0736 - 24760576-24760690,24760885-24761108,24761188-247612... 31 9.7
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 318 bits (780), Expect = 3e-86
Identities = 190/499 (38%), Positives = 275/499 (55%), Gaps = 34/499 (6%)
Query: 70 DKLLGQTWIYPTNYPVRDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYNFYRWYPLG 129
D +TWIYPTN VR+YQ + AL NTLV+LPTGLGKTFIAAVVMYN++RW+P G
Sbjct: 151 DHEAARTWIYPTNVQVREYQKKFVEKALFTNTLVALPTGLGKTFIAAVVMYNYFRWFPEG 210
Query: 130 KIVFTAPTRPLVAQQIDACYNIVAIPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQVIY 189
KIVFTAPTRPLV QQI+AC+N V IP TI++ G++ S R W++KRVFF TPQV+
Sbjct: 211 KIVFTAPTRPLVTQQIEACHNTVGIPQEWTIDLKGNLSPSKRSCFWKSKRVFFVTPQVLQ 270
Query: 190 NDIKSGICPGDKIRCLVIDEAHRARKNYAYCQIINALDDMGHKTYRILALSATPGXXXXX 249
NDI+SGIC +++ CLVIDEAHRA +NYAYC ++ L + RILAL+ATPG
Sbjct: 271 NDIQSGICMVNQLVCLVIDEAHRASRNYAYCVVVREL-EAARVPLRILALTATPGSKQPA 329
Query: 250 XXXXXXXLHIANLELRSEECIDVARYSHSRKINTV--------IIPLGTELTHLKQRYVE 301
L I+ L E +V+RY R + + IP+G E + + ++
Sbjct: 330 IQNVINNLRISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGDEAEQVNDKLLD 389
Query: 302 ILDCYARRLKQLNILP-QNLGNLSKGRIVMMYKDFQTKDRSNRHPQHNYIMKDFMMLIAL 360
++ + +L+ ++ ++ N S ++ M+ KD+ ++ P N + D +
Sbjct: 390 VIRPHLVKLRSARVIDHRDASNWSPHQLRML------KDKFDQAPPPNIPLADKKEIGIS 443
Query: 361 FHGLELLTKHGSRVFLNFFDEHPEKSWIQSDDKLTGLLEQLRDDLGINPMSLNTSILPDG 420
F L LL +G L + I++ K R++ + + L G
Sbjct: 444 FQALTLL--YGIMKMLLSYGIKAAHQSIEAKYKEGSWKVLTRNNTFLEVKKTMENFLSQG 501
Query: 421 TIPEIPKNLSFGHPKFYKLKEIMMEHFTKAQQNGQDTRAIVFCEYRESVNLVHCLLLQC- 479
+ PK L E++++HF K N +D+R I+F YRE V + C L
Sbjct: 502 IL----------SPKVRTLVEVLLDHFRK---NPKDSRVIIFAHYRECVKEILCSLRNID 548
Query: 480 RPLITPQTFVGQGASGKDGRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDL 539
L+ P F+GQ ++G D +Q Q ++ FR+G N LVAT + EEGLD+ VDL
Sbjct: 549 GELVRPAAFIGQSSTG-DQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVDL 607
Query: 540 ILCFDISTRSPVRLVQRDG 558
++CFD + S +R++QR G
Sbjct: 608 VVCFDANI-SALRMIQRMG 625
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 51.6 bits (118), Expect = 5e-06
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 92 IINAALVKNTLVSLPTGLGKTFIAAVVMYNFYRWYPLGK-----IVFTAPTRPLVAQQID 146
+ AAL NT+ L TG GKT +A ++ R G+ +VF APT LV QQ +
Sbjct: 46 VFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQFE 105
Query: 147 ACYNIVAIPPRDTIEMTGHMQTSTRKL-HWQNK----RVFFATPQVIYNDIKSGICPGDK 201
+ D + +G + HW+ + + TPQ++ + ++
Sbjct: 106 VIREYTDL---DVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSA 162
Query: 202 IRCLVIDEAHRARKNYAYCQII 223
+ L+ DE HRA ++ Y +I+
Sbjct: 163 VSLLIFDECHRACGSHPYARIM 184
Score = 36.3 bits (80), Expect = 0.19
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 495 GKDGRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLV 554
G + +S Q + FRAG N L T V EEG+DV + ++ FD+ R+ V
Sbjct: 402 GSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDL-PRTVCSYV 460
Query: 555 QRDG 558
Q G
Sbjct: 461 QSRG 464
>09_02_0405 -
8597807-8598045,8599218-8599284,8599571-8599636,
8599731-8599795,8600514-8600872,8601118-8601125,
8601567-8601656,8601770-8601962,8603518-8603608,
8603948-8604080,8605340-8605480,8605601-8605662,
8605743-8605830,8606107-8606536,8606651-8606757
Length = 712
Score = 48.8 bits (111), Expect = 3e-05
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 86 RDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVM--YNFYRWYPLGK--IVFTAPTRPLV 141
R YQ + A+ NTL L TG GKT IA +++ Y P + VF PT LV
Sbjct: 35 RWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVLV 94
Query: 142 AQQIDACYNIVAIPPRDTIEMTG--HMQTSTRKLHWQNKRVFFATPQVIYNDIKSGICPG 199
QQ + + G +T + ++ V TPQ++ ++++
Sbjct: 95 GQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFRL 154
Query: 200 DKIRCLVIDEAHRARKNYAYCQI 222
I L+ DE H AR N Y I
Sbjct: 155 QDIALLIFDECHHARGNTPYACI 177
Score = 43.6 bits (98), Expect = 0.001
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 455 QDTRAIVFCEYRESVNLVHCLLLQCRPLITPQTFVGQGASGKDGRTVVSQPQQLRVMRAF 514
QD R IVF + R ++V LL ++ V A + G S+ ++ +F
Sbjct: 354 QDLRCIVFVQ-RVITSIVLEPLLSSIHQMSGWN-VKHMAGSRPGLLSQSRKNHTEIVESF 411
Query: 515 RAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAKLLQSNEI--KES 572
R G + ++AT + EEGLDV S +L++ FD S + V+ K L S +I +ES
Sbjct: 412 RKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATNQRGDVEAHTNAKKFLASGQIMREES 471
Query: 573 L 573
L
Sbjct: 472 L 472
>03_05_0155 -
21307001-21307239,21308217-21308320,21308564-21308772,
21308773-21308838,21308933-21308997,21309716-21309942,
21310156-21310269,21310515-21310522,21310964-21311053,
21311167-21311359,21312934-21313024,21313364-21313496,
21314756-21314896,21315017-21315078,21315159-21315246,
21315523-21315952,21316067-21316173
Length = 788
Score = 48.8 bits (111), Expect = 3e-05
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 86 RDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVM--YNFYRWYPLGK--IVFTAPTRPLV 141
R YQ + A+ NTL L TG GKT IA +++ Y P + VF PT LV
Sbjct: 35 RWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVLV 94
Query: 142 AQQIDACYNIVAIPPRDTIEMTG--HMQTSTRKLHWQNKRVFFATPQVIYNDIKSGICPG 199
QQ + + G +T + ++ V TPQ++ ++++
Sbjct: 95 GQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFRL 154
Query: 200 DKIRCLVIDEAHRARKNYAYCQI 222
I L+ DE H AR N Y I
Sbjct: 155 QDIALLIFDECHHARGNTPYACI 177
Score = 45.2 bits (102), Expect = 4e-04
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 455 QDTRAIVFCEYRESVNLVHCLLLQCRPLITPQTFVGQGASGKDGRTVVSQPQQLRVMRAF 514
QD R IVF E R ++V LL ++ V A + G S+ ++ +F
Sbjct: 354 QDLRCIVFVE-RVITSIVLEHLLSSIHQMSGWN-VKHMAGSRPGLLSQSRKNHTEIVESF 411
Query: 515 RAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAKLLQSNEI--KES 572
R G + ++AT + EEGLDV S +L++ FD S + V+ K L S +I +ES
Sbjct: 412 RKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATNQRGDVEAQTNAEKFLASGQIMREES 471
Query: 573 L 573
L
Sbjct: 472 L 472
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 47.6 bits (108), Expect = 8e-05
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNA 561
+SQ Q+ R + FR G N LVAT VA GLD+ +VDL++ +++ S + V R G A
Sbjct: 383 ISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVIHYELPNTSEL-FVHRSGRTA 441
Query: 562 K 562
+
Sbjct: 442 R 442
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
++Q Q+ R ++ FR G N L+AT VA GLD+ +VDL++ F++ S + V R G
Sbjct: 375 ITQAQRERTLKGFREGHFNILIATDVAARGLDIPNVDLVIHFELPNSSEL-FVHRSG 430
>01_06_1742 -
39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 82 NYPVRDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYNF---YRWYPLGK-IVFTAPT 137
++ R YQ ++ A+ +NT+ L TG GKT IA +++ F R GK I+F APT
Sbjct: 33 DFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPT 92
Query: 138 RPLVAQQID 146
LV QQ +
Sbjct: 93 VQLVTQQCE 101
Score = 40.7 bits (91), Expect = 0.009
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 434 PKFYKLKEIMMEHFTKAQQNGQDTRAIVFCEYRESVNLVHCLLLQCRPLIT-PQTFVGQG 492
PK Y+L +I N + R ++F + + + ++ ++ + L +F+ G
Sbjct: 344 PKLYELIQIFHSF-----SNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVSFLTGG 398
Query: 493 ASGKDGRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI--STRSP 550
S D T Q L +FR+G N L T VAEEG+ V ++ FD+ +TRS
Sbjct: 399 RSSVDALTPKMQKDTLD---SFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRSY 455
Query: 551 V----RLVQRDGLNAKLLQSNEIKES 572
V R Q D +++ +K++
Sbjct: 456 VQSRGRARQEDSQYILMIERGNVKQN 481
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 45.6 bits (103), Expect = 3e-04
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
+SQ Q+ R + FR G LVAT VA GLD+ +VDLI+ +++ P V R G
Sbjct: 410 ISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEL-PNDPETFVHRSG 465
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 43.6 bits (98), Expect = 0.001
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNA 561
+SQ ++L + FR CN LV T VA GLD+ VD+++ +D S + R G A
Sbjct: 258 MSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSK-DYIHRVGRTA 316
Query: 562 KLLQS 566
+ QS
Sbjct: 317 RAGQS 321
>04_04_0468 -
25447774-25447945,25449016-25449130,25449541-25449877,
25450299-25450628,25451090-25451362,25451471-25451929,
25452307-25452516,25452617-25452828,25453304-25453404,
25453584-25454008,25454167-25454360,25454436-25454701,
25454809-25455015,25455121-25455281,25455741-25455933,
25456158-25456251,25457238-25457373,25458074-25458202,
25458315-25458449,25458549-25458613,25459875-25459950,
25460775-25460885,25461194-25461371,25462340-25462434
Length = 1557
Score = 43.2 bits (97), Expect = 0.002
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 86 RDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYNFYRWY--PLGKI-VFTAPTRPLVA 142
R YQ ++ A+ +N +V L TG GKT IA +++Y P ++ +F APT PLV
Sbjct: 31 RKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLAPTIPLVR 90
Query: 143 QQ 144
QQ
Sbjct: 91 QQ 92
Score = 37.5 bits (83), Expect = 0.084
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 498 GRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
G +S+ + +++ F +G N LVAT V EEGLD+ + L++ FD+
Sbjct: 384 GSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDL 431
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 84 PVRDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYNFYRWYPLGKIVFTAPTRPLVAQ 143
P++ F+++ + N L+ PTG GKT A + M + + P K+V+ AP + +V +
Sbjct: 1284 PIQTQAFHVLYHS-DNNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVVYIAPLKAIVRE 1342
Query: 144 QI-DACYNIVAIPPRDTIEMTG 164
++ D +V + +EMTG
Sbjct: 1343 RMNDWRQRLVTQLGKKMVEMTG 1364
Score = 36.7 bits (81), Expect = 0.15
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 99 KNTLVSLPTGLGKTFIAAV-VMYNFYRWYPLG-------KIVFTAPTRPLVAQQIDACYN 150
+N LV PTG GKT IA + V++ + + G KIV+ AP + L A ++ + ++
Sbjct: 451 ENILVCAPTGAGKTNIAMIAVLHEVKQHFRDGILHKNEFKIVYVAPMKALAA-EVTSTFS 509
Query: 151 IVAIPPRDTI-EMTGHMQTSTRKLHWQNKRVFFATPQV--IYNDIKSGICPGDKIRCLVI 207
P + E+TG MQ + ++ + ++ TP+ + S + ++ ++I
Sbjct: 510 RRLSPLNLVVRELTGDMQLTKNEI--EETQMIVTTPEKWDVITRKSSDMSLSMLVKLIII 567
Query: 208 DEAH 211
DE H
Sbjct: 568 DEVH 571
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 42.3 bits (95), Expect = 0.003
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNA 561
+SQ ++L + F+ CN L+ T VA GLD+ VD+++ +DI S V R G A
Sbjct: 316 MSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSK-DYVHRVGRTA 374
Query: 562 K 562
+
Sbjct: 375 R 375
>03_02_0901 + 12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 42.3 bits (95), Expect = 0.003
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 856 DVDLIDYISSKSISEYRNRAVEDRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSND 915
D I+ K ++ + + D N + A+ N N + LE + +SE S+D
Sbjct: 405 DQSFINLFGRKPAAQSEDISGNQNDQGDANILEEADGNNICNANT-LESNDHSYSECSSD 463
Query: 916 NEFEKDEVNRENNFDIGELHDI-FANSSPLDNFEAEKTDKPQENEKKVLSFFGLDSVEDI 974
+E + DE ++N+ ++G ++ F N +A + +++ ++ +F L E+
Sbjct: 464 SEHDNDEATQQNDHEVGLREEVEFCNGRM--RRKAVSANFKDDDDDEIFNFKLLKGAEED 521
Query: 975 FADYEDSFDKKCDEPEMKDIEAD-KTDDVT 1003
D E+S D + E D E +DD T
Sbjct: 522 DVDSENSGDDQLSEGSADDSEESLDSDDET 551
>03_01_0149 -
1175689-1176258,1176345-1176509,1176631-1177539,
1178179-1178378,1178505-1178605,1178747-1179369,
1179451-1179546,1179637-1179798,1179889-1180068,
1180173-1180323,1180408-1180641,1180753-1180913,
1181041-1181163,1181261-1181421,1181655-1181877,
1181952-1182346,1182461-1182671,1183536-1184522
Length = 1883
Score = 40.3 bits (90), Expect = 0.012
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 452 QNGQDTRAIVFCEYRESVNLVHCLLLQCRPLITPQTFVGQGAS-GKDGRTVVSQPQQLRV 510
Q+ +D RAI+F E R LV +L P ++ F+ + G + + Q
Sbjct: 637 QHTEDFRAIIFVE-RVVTALVLPKVLAELPSLS---FIRCASLIGHNNNQEMRACQMQDT 692
Query: 511 MRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAK-------L 563
+ FR G LVAT VAEEGLD+ ++++ FD++ ++ + +Q G K +
Sbjct: 693 ISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA-KTVLAYIQSRGRARKPGSDYILM 751
Query: 564 LQSNEIKESLYKRNPR 579
L+ I + RN R
Sbjct: 752 LERGNISHETFLRNAR 767
Score = 37.5 bits (83), Expect = 0.084
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 179 RVFFATPQVIYNDIKSGICPGDKIRCLVIDEAHRARKNYAYCQIINALDDMGHKTYR--I 236
+V T Q++ N ++ I D I L++DE H A K + Y +++ K R +
Sbjct: 329 QVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAV 388
Query: 237 LALSATPGXXXXXXXXXXXXLHIANLELRSEECI 270
++A+P + I NLE + + +
Sbjct: 389 FGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVV 422
Score = 33.9 bits (74), Expect = 1.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 86 RDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVM 119
R YQ ++ A +NT+ L TG GKT IA +++
Sbjct: 268 RQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLI 301
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 39.1 bits (87), Expect = 0.028
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIST 547
SQ ++ V+ FR+G C LVAT VA GLD+ + +++ +D T
Sbjct: 459 SQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPT 503
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 38.7 bits (86), Expect = 0.036
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAK 562
Q ++L + F++ L+AT VA GLD+ +VDL++ +D+ R P + R G A+
Sbjct: 357 QSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDV-PRYPRDYIHRVGRTAR 414
>06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194
Length = 569
Score = 38.3 bits (85), Expect = 0.048
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 906 SQIFSEKSNDNEFEKDEVNRENNFDIGELHDIFANSSPLDNFEAEKTDKPQENEKKVLSF 965
SQ + SN +E+ KD +N + + E+ D + P + EA K + +++ +
Sbjct: 14 SQSGDDDSNSDEW-KDFLNLDGGEEAAEVDDDCNLAPPEKDAEAAKASQSGDDDSNTDQW 72
Query: 966 FGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTD 1000
G ++ED E D+ D+P KD EA K D
Sbjct: 73 KGYLNLEDGEEAAEVDDDRNLDQPPEKDAEAAKVD 107
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 37.9 bits (84), Expect = 0.064
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIS 546
Q ++ ++ F++G + LVAT VA GLD+ S+ ++ FDI+
Sbjct: 500 QASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIA 542
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 37.5 bits (83), Expect = 0.084
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRL 553
Q + RV FR GAC LV T + G+D+ +V++++ FD S L
Sbjct: 420 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYL 469
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 37.5 bits (83), Expect = 0.084
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 510 VMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAK 562
+MR FR+G+ L+ T + G+DV V L++ +D+ T+ P + R G + +
Sbjct: 322 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ-PENYLHRIGRSGR 373
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 37.5 bits (83), Expect = 0.084
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 510 VMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAK 562
+MR FR+G+ L+ T + G+DV V L++ +D+ T+ P + R G + +
Sbjct: 322 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ-PENYLHRIGRSGR 373
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 37.1 bits (82), Expect = 0.11
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI--STRSPVRLVQRDG 558
Q + RV FR GAC LV T + G+D+ +V++++ FD S + + V R G
Sbjct: 397 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSG 453
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 36.7 bits (81), Expect = 0.15
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLIL--CFDISTRSPVRLVQRDGLN 560
+Q + + + F+ G+C ++AT VA GLD+ V++++ + ++T V + R G
Sbjct: 354 AQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRA 413
Query: 561 AK 562
K
Sbjct: 414 GK 415
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 36.7 bits (81), Expect = 0.15
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFD 544
Q + RV FR GAC LV T + G+D+ +V++++ FD
Sbjct: 407 QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 447
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 36.7 bits (81), Expect = 0.15
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIST 547
SQ ++ +V+ FR+G LVAT VA GLD+ + +++ +D T
Sbjct: 429 SQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPT 473
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 36.3 bits (80), Expect = 0.19
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIST 547
SQ ++ V+ FR G LVAT VA GLD+ + +++ +D T
Sbjct: 883 SQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPT 927
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 35.9 bits (79), Expect = 0.26
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLIL 541
V+Q Q+ ++ FR+G LVAT VA GLD+ V LI+
Sbjct: 388 VAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLII 427
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 35.5 bits (78), Expect = 0.34
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 514 FRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
F++ C+ L+AT VA GLDV ++L++ +D+
Sbjct: 707 FKSNVCSLLIATSVAARGLDVKELELVVNYDV 738
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 35.5 bits (78), Expect = 0.34
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+Q ++ +R+F++GA LVAT VA GLD+ V ++ FD+
Sbjct: 531 TQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDL 573
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 34.7 bits (76), Expect = 0.59
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
V + ++ +R+F++GA LVAT VA GLD+ V ++ FD+
Sbjct: 625 VMKKEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDL 668
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 34.3 bits (75), Expect = 0.79
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 140 LVAQQIDACYNIV--AIPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQVIYNDIKSGIC 197
L++Q ++ C +I +P R + G Q + + Q V ATP ++ G
Sbjct: 363 LISQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFV 422
Query: 198 PGDKIRCLVIDEAHRARKNYAYCQIINALDDMGHKTYRILALSAT 242
+ +RC+V+DE ++ Q+++ L + T + L ++AT
Sbjct: 423 QLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTAT 467
>08_01_0315 -
2780657-2780704,2781555-2781608,2781826-2781976,
2782650-2782888,2783141-2783272,2783594-2783658,
2784289-2784377,2784664-2784902
Length = 338
Score = 33.9 bits (74), Expect = 1.0
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 99 KNTLVSLPTGLGKTFIAAVVMYNF---YRWYPLGK-IVFTAPTRPLVAQQI 145
+NT+ L TG GK IA + + F R GK I+F APT LVAQ I
Sbjct: 3 RNTIAMLDTGAGKIMIAVMFIKEFGKINRTKNAGKVIIFLAPTVQLVAQVI 53
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 33.9 bits (74), Expect = 1.0
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNA 561
+ Q + + + +F A + LV T VA GLD+ VDLI+ +D + P + R G A
Sbjct: 322 MKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYD-PPQDPNVFIHRAGRTA 380
Query: 562 KLLQSNE 568
+ Q +
Sbjct: 381 RYDQEGD 387
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 33.5 bits (73), Expect = 1.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI--STRSPVRLVQRDGLN 560
+Q ++ +R+F+ G +VAT VA GLDV +V ++ +D+ S V + R G
Sbjct: 411 TQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRA 470
Query: 561 AK 562
K
Sbjct: 471 GK 472
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 33.1 bits (72), Expect = 1.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 517 GACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAKLLQSNEIKESLYKR 576
G C TLV T +A GLD+ VD ++ FD + S + + R G A++ ++ + K+
Sbjct: 424 GDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNS-IDYLHRTGRTARMGAKGKVTSLVAKK 481
Query: 577 N 577
+
Sbjct: 482 D 482
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+Q ++ +R+F++G LVAT VA GLD+ V ++ FD+
Sbjct: 451 NQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDL 493
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 32.3 bits (70), Expect = 3.2
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 603 KQNNENCKKGQKNIRSMLLSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISEN----K 658
K N+ K +++ +S SKS + S +K SK E ++ +L P +S+ K
Sbjct: 146 KLTNKAGKSSKQSGKSWKDSKSSKESKDSKSSKESKEPKPSKDSKQLKPPKVSKESKPLK 205
Query: 659 YFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDT 709
E K+ D++ KD + L SK EL++ L+D+ +D+
Sbjct: 206 DSKEDKKAVKEDKKAAAKDSKEQKKALKDSK--ELKKALKDSKEQGSQKDS 254
>07_03_0922 -
22612773-22613321,22613616-22614189,22614389-22614466,
22615455-22615504,22616215-22616448
Length = 494
Score = 32.3 bits (70), Expect = 3.2
Identities = 41/200 (20%), Positives = 70/200 (35%), Gaps = 12/200 (6%)
Query: 571 ESLYKRNPRMMPHDFTPKCQMLHITVAKRNETKQNNENCKKGQKNIRSMLLSKSKEPSNT 630
+S+ K D +C H NE +N + K RS S ++E SN+
Sbjct: 124 QSMIKSLSNSKHDDGNSECHTSHTESCSNNENTADNNSSSKALSKDRSSAASFTEEASNS 183
Query: 631 TKKSK----GKSELITNEQYGKLSPETISENKYFAEHKEYWS-------MDRETYLKDDS 679
K K + N + + + E K AE W DR T+L D+
Sbjct: 184 QKSEKVQHCDTDSIQVNNTSAEALVKPLVEKKVCAEDGLLWGSRKKRAVRDRRTFLMADN 243
Query: 680 NVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSLASQEFL 739
+ + S +Q + T L + + K L ++++Q
Sbjct: 244 SCRAGENTST-SHIQTDGSSEGYAKKGLKTPNLESGVSVVEKAKPNLAEILKTISTQSDC 302
Query: 740 TKLQKPSPVKSKQARKRQKI 759
LQ+ V+ K+ R ++ I
Sbjct: 303 YMLQRRLDVQRKRTRYKKMI 322
>04_04_0293 - 24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 32.3 bits (70), Expect = 3.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 1421 VGSIIDFICDD---NVTQHEDVQALYLKTTKSPLKQGG 1455
V S+ D +CDD Q+E+V A Y + +K LK GG
Sbjct: 145 VDSVFDVLCDDFSDEDFQYEEVDARYYRVSKRTLKAGG 182
>01_06_1097 +
34507376-34507395,34509380-34511214,34511263-34511598,
34511800-34513691
Length = 1360
Score = 32.3 bits (70), Expect = 3.2
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 922 EVNRENNFDIGEL-----HDIFANSSPLDNFEAEKTDKPQENEKKVLSFFGLDSVEDIFA 976
+V+ +NN + GEL D+F D+F +TD E + +F ++VE +
Sbjct: 552 DVSADNNVNPGELVKASHRDMFFRRH--DSFNIGRTDATLERFSRFKPYFVPETVEGSLS 609
Query: 977 DYEDSF-DKKCDEPEMKDIE 995
+++ F DK D+ + KD++
Sbjct: 610 NFQRQFSDKIADQEDHKDLD 629
>11_06_0606 +
25432471-25432517,25433098-25433173,25433272-25433448,
25433576-25433653,25433749-25433853,25434042-25434108,
25434219-25434280,25434371-25434510,25434717-25434843,
25434917-25435031,25435220-25435308,25435699-25435782,
25435961-25436737
Length = 647
Score = 31.9 bits (69), Expect = 4.2
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 872 RNRAVEDRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEV 923
RN A+E++ S + D AEKN+S D E + ++ SEK + E K++V
Sbjct: 555 RNMALEEQLSAAMASKDEAEKNLSLVIDSKEELEKRL-SEKDREVETLKEKV 605
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 31.5 bits (68), Expect = 5.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 88 YQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYNFYRWYPLGKIV 132
Y+ N+ N L V + GK F A V+ N RW GK++
Sbjct: 316 YKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDTFGKLL 360
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 31.5 bits (68), Expect = 5.5
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 460 IVFCEYRESVNLVHCLLLQCRPLITPQTFVGQGASGKDGRTVVSQPQQLRVMRAFRAGAC 519
+VFCE++ V+ + LL L + G GKD ++ ++F+A
Sbjct: 428 LVFCEHKADVDYIQEFLL----LKGVEAVAIHG--GKDDE------ERKDAFKSFKASEK 475
Query: 520 NTLVATCVAEEGLDVGSVDLILCFDI 545
+ LVAT VA +GLD+ + ++ +D+
Sbjct: 476 DVLVATDVASKGLDIPDIQHVINYDM 501
>06_03_1011 - 26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 31.1 bits (67), Expect = 7.3
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 983 DKKCDEPEMKDIEADKTDDVTFLNVRSTTETHKPMPDENPLSPSILSGRVKVKEQVTSPI 1042
DK EP+ + DK D+VT +++ +N P ++G+ +VK Q +
Sbjct: 602 DKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQN--KPCSVNGKSEVKYQQNFAV 659
Query: 1043 -LCSQKRKFELSTKKEI 1058
+K FEL + ++
Sbjct: 660 HEVGRKETFELGSSSDV 676
>03_02_0863 - 11889492-11889761,11890257-11890421,11890518-11890637
Length = 184
Score = 31.1 bits (67), Expect = 7.3
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 696 TLQDTVNVEHSEDTVLLTEL-LQFSKTKKNELKNSQNSLASQEF---LTKLQKPSPVKSK 751
+L T +E SE L LQF+ TKK EL S ++ A+QE TKL P+ K
Sbjct: 112 SLGPTRGLEESELLALAANKDLQFNYTKKPELVPSGDAAAAQELDRGSTKLSPPAKPLVK 171
Query: 752 QARKRQKITHS 762
Q + + + S
Sbjct: 172 QGSEERSLVSS 182
>10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 30.7 bits (66), Expect = 9.7
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 1216 KFSVQIDSKRKLEMDDDEIASPYFNKKPKLTKSPDKQRTLKEKILASVSSFKVKQKFDNF 1275
K +VQ D KR L+M + + P + PK +PD+++ ++E++ + + +++
Sbjct: 652 KLAVQCD-KRSLDMVEQTPSPPATTEPPKKRFAPDRKQAIREELDELLKAGFIREV---L 707
Query: 1276 HCSVSQSNVLSQKENRNPQFASQFAKTTSATEKD 1309
H + V+ +K N + F A KD
Sbjct: 708 HPEWLANPVMVRKANGKWRICVDFTDLNKACPKD 741
>02_04_0307 -
21905897-21906490,21906581-21906722,21907116-21907247,
21907303-21907433,21908028-21908185,21908299-21908396,
21908511-21908631,21908748-21908965,21909230-21909429
Length = 597
Score = 30.7 bits (66), Expect = 9.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 194 SGICPGDKIRCLVIDEAHRARKNYAY-CQIINALDDMG 230
SG+ P D+I L +DE H ++ Y Q +N DD G
Sbjct: 321 SGVIPNDEILALAVDEFHSSQSVYQQELQDLNRWDDHG 358
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 30.7 bits (66), Expect = 9.7
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 856 DVDLIDYISSKSISEYRNRAVEDRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSND 915
D DLI+ I SKS +E +D S D N + +++ D D D E+ ND
Sbjct: 45 DRDLINRILSKSKTETVPENKDDGESDDDNDEEGDDEDAENQGDDDAG-DEDASEEEGND 103
Query: 916 NEFEKD-EVNRE---NNFDIGELHDIFANSSPLDNFEAEKTDKPQENEKK 961
+ + D E N E ++ D GE D D E E D ++ E++
Sbjct: 104 EDEDGDPEANGEGGSDDDDGGEDDDDEDEDGDDDEGEGEGEDDDEDEEEE 153
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 30.7 bits (66), Expect = 9.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 734 ASQEFLTKLQKPSPVKSKQARKRQKITHSP 763
AS EF TK ++ ++++A KRQK+ H P
Sbjct: 354 ASHEFQTKKKRQQQRQAEEAAKRQKLQHPP 383
>01_05_0736 - 24760576-24760690,24760885-24761108,24761188-24761248,
24761909-24763992
Length = 827
Score = 30.7 bits (66), Expect = 9.7
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Query: 883 DVNKTDLAEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNRENNFDIGELHDIFANSS 942
+ ++ L ++++ + + D + S +EF+ + N + D E H+ +
Sbjct: 451 ECDEDSLVDESMCKTHEQKSKDDHSSPEDVSKTHEFDSTKDNISSAVDGNEKHEFESKKD 510
Query: 943 PLDNFEAEKTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDV 1002
++ E E +K E + K GL+ E++ + D +K+ + ++D A D
Sbjct: 511 DTNSLEGESLNKEHEQKSKEDENSGLEG-ENVKKGF-DKNNKESENSALEDANAPLEDTR 568
Query: 1003 TFLNVRSTTE--THKPMPDEN 1021
+ S +E K +EN
Sbjct: 569 NASDAASLSEISEEKKTEEEN 589
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,377,360
Number of Sequences: 37544
Number of extensions: 1570431
Number of successful extensions: 4115
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4040
Number of HSP's gapped (non-prelim): 81
length of query: 1553
length of database: 14,793,348
effective HSP length: 92
effective length of query: 1461
effective length of database: 11,339,300
effective search space: 16566717300
effective search space used: 16566717300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
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