Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002427-TA|BGIBMGA002427-PA|IPR006935|Type III
restriction enzyme, res subunit, IPR001650|Helicase, C-terminal,
IPR014001|DEAD-like helicases, N-terminal, IPR014021|Helicase
superfamily 1 and 2 ATP-binding
(1553 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical pr... 49 2e-05
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 46 2e-04
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 43 0.002
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 42 0.003
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 42 0.003
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 42 0.003
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 42 0.005
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 40 0.011
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 40 0.011
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 39 0.032
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.032
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.032
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 39 0.032
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 39 0.032
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 39 0.032
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 39 0.032
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 39 0.032
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.043
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.043
Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical pr... 38 0.075
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 38 0.075
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 38 0.075
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 38 0.075
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 37 0.099
AF100664-2|AAC68984.1| 665|Caenorhabditis elegans Hypothetical ... 37 0.13
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 37 0.13
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 37 0.13
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 36 0.17
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 36 0.17
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 36 0.17
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 36 0.23
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 36 0.30
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 36 0.30
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 35 0.40
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.70
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 34 0.70
AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical... 34 0.70
Z83228-6|CAB05731.1| 148|Caenorhabditis elegans Hypothetical pr... 34 0.92
AF045639-1|AAC02565.1| 672|Caenorhabditis elegans Hypothetical ... 34 0.92
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 34 0.92
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 33 1.2
Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 33 1.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 1.6
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 33 1.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 1.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 1.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 1.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 2.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 2.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 2.1
AF100307-10|AAC68930.1| 295|Caenorhabditis elegans Hypothetical... 33 2.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 32 2.8
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 32 2.8
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 32 2.8
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 32 2.8
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 32 3.7
Z22177-2|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 32 3.7
AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical ... 32 3.7
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 32 3.7
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 31 4.9
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 31 4.9
Z70205-4|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 31 4.9
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 31 4.9
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 31 4.9
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 31 6.5
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 6.5
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 31 6.5
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 31 6.5
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 31 6.5
Z93389-6|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 31 8.6
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 31 8.6
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 31 8.6
Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical pr... 31 8.6
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 31 8.6
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 31 8.6
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 31 8.6
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 31 8.6
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 31 8.6
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 31 8.6
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 31 8.6
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 31 8.6
>U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical
protein F56A3.1 protein.
Length = 783
Score = 49.2 bits (112), Expect = 2e-05
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 68 GYDKLLGQTWIYPTNYPVRDYQFNIINAALVKNTLVSLPTGLGKT--FIAAVVMYNFYRW 125
G+D + G YP N P+R+++ N++ N V+LP+ T I A+ ++NF +W
Sbjct: 111 GFDDIHGNGIFYPINEPIRNFELNLLKCLSSSNCCVALPSSSPSTPGRICAMTVFNFLKW 170
Query: 126 YPLGKIVFTA 135
+P +++ +
Sbjct: 171 FPRCRVLLVS 180
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 46.0 bits (104), Expect = 2e-04
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 456 DTRAIVFCEYRESVNLVHCLLLQCRPLIT----PQTFVGQ--GASGKDGRTVVSQPQQLR 509
++R I+F R + V L + + L + VG G + + SQ QQL
Sbjct: 760 ESRVIIFVTQRSTAQRVSDFLNESKVLDQFGNYGEQMVGYVLGTNKQGAVQQTSQEQQLT 819
Query: 510 VMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
+ + F G +VAT V EEGLDV + +LI+ ++ S+ S ++LVQ+ G
Sbjct: 820 LDK-FNNGRLKVIVATSVVEEGLDVTACNLIIKYNCSSGSAIQLVQQRG 867
Score = 45.2 bits (102), Expect = 4e-04
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 81 TNYPVRDYQFNIINAALV-KNTLVSLPTGLGKTFIAA-VVMYNFYRWYPLGK---IVFTA 135
T +R YQ ++ AL KN ++ PTG GKT +A + + GK +V
Sbjct: 367 TELVLRTYQEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEERTSQGKPSRVVLLV 426
Query: 136 PTRPLVAQQIDA----CYNIVAIPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQVIYND 191
P PLV QQ D C + + E + + + R+ V TPQ++ N
Sbjct: 427 PKIPLVGQQKDRFLKYCNGMYEVNGFHGSESS--VSGTGRRDEVIATHVSVMTPQILINM 484
Query: 192 IKSGICPGDKI-----RCLVIDEAHRARKNYAYCQIINALDDMGHKTYRILALSAT 242
++S + +++ ++ DE H+A KN+ Y I + + ++ +I+ L+A+
Sbjct: 485 LQS-VRQNERLYVSDFSMMIFDEVHKAAKNHPYVLINQMVQEWKYEKPQIIGLTAS 539
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 43.2 bits (97), Expect = 0.002
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 99 KNTLVSLPTGLGKTFIAAVVMYNFYRWYPLGKIVFTAPTRPLVAQQID 146
K+ L+ PTG GKT A + M+ + +P K+V+ AP + LV +++D
Sbjct: 977 KSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPLKSLVRERVD 1024
Score = 34.7 bits (76), Expect = 0.53
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 99 KNTLVSLPTGLGKTFIAAVVMYNFYRWYPLG---------KIVFTAPTRPLVAQQIDACY 149
+N L+ PTG GKT IA + + N + KI++ AP + L + ++
Sbjct: 109 ENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFG 168
Query: 150 NIVAIPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQ---VIYNDIKSGICPGDKIRCLV 206
+A E+TG Q S ++ + ++ TP+ VI S + +R L+
Sbjct: 169 KRLAPLGLKVKELTGDTQLSRNEV--ADTQMLVLTPEKWDVITRKSTSDNSLINVVRLLI 226
Query: 207 IDEAH 211
IDE H
Sbjct: 227 IDEVH 231
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 86 RDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYNF 122
RDYQ +++ A KNT+V L TG GKTFIA +++ +
Sbjct: 14 RDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLLKEY 50
Score = 40.7 bits (91), Expect = 0.008
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 492 GASGKDGRTVVSQ---PQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFD 544
GASG++ + SQ +Q V+R F N L+AT V EEG+DV +L++ FD
Sbjct: 424 GASGRNLASSDSQGLHKRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFD 479
Score = 30.7 bits (66), Expect = 8.6
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 653 TISENKYFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSED 708
T+S K + +E + + LK L+MS+ +E R L+DTVN+E D
Sbjct: 1175 TVSPPKQLTKEEEQFKKLQNDLLKQAKERLEALEMSEDMEKPRRLEDTVNLEDYGD 1230
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 42.3 bits (95), Expect = 0.003
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 85 VRDYQFNIINAALV-KNTLVSLPTGLGKTFIAA-VVMYNFYRWYPLG---KIVFTAPTRP 139
+R+YQ + AL KNT+V+ PTG GKT IAA ++ +F G K +F P
Sbjct: 293 LRNYQEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSM 352
Query: 140 LVAQQIDACYNIVAIPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQVIYN 190
++ QQ + + + I + G TR + Q+K + ATPQ+I N
Sbjct: 353 ILNQQAASISSYLDHVYHTQI-IQGSDNVPTRNV-IQSKDLIVATPQMIVN 401
Score = 41.9 bits (94), Expect = 0.003
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 451 QQNGQ--DTRAIVFCEYRESVNLVHCLLLQCRPL----ITPQTFVGQGASGKDGRTV-VS 503
+QN Q D+R I+F R +++ +L L I + G S + S
Sbjct: 692 EQNLQRADSRTIIFVRTRYEATILNKVLNSNEELLMLGIKSEWMSGLNKSTASSADISAS 751
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
+ +Q+ ++ F G LV+T VAEEGLDV L++ ++ +T + + VQR G
Sbjct: 752 KQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYAT-NEIAHVQRRG 805
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 42.3 bits (95), Expect = 0.003
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 85 VRDYQFNIINAALV-KNTLVSLPTGLGKTFIAA-VVMYNFYRWYPLG---KIVFTAPTRP 139
+R+YQ + AL KNT+V+ PTG GKT IAA ++ +F G K +F P
Sbjct: 293 LRNYQEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSM 352
Query: 140 LVAQQIDACYNIVAIPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQVIYN 190
++ QQ + + + I + G TR + Q+K + ATPQ+I N
Sbjct: 353 ILNQQAASISSYLDHVYHTQI-IQGSDNVPTRNV-IQSKDLIVATPQMIVN 401
Score = 41.9 bits (94), Expect = 0.003
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 451 QQNGQ--DTRAIVFCEYRESVNLVHCLLLQCRPL----ITPQTFVGQGASGKDGRTV-VS 503
+QN Q D+R I+F R +++ +L L I + G S + S
Sbjct: 692 EQNLQRADSRTIIFVRTRYEATILNKVLNSNEELLMLGIKSEWMSGLNKSTASSADISAS 751
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
+ +Q+ ++ F G LV+T VAEEGLDV L++ ++ +T + + VQR G
Sbjct: 752 KQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYAT-NEIAHVQRRG 805
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 41.5 bits (93), Expect = 0.005
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 452 QNGQ--DTRAIVFCEYRESVNLVHCLLL-QCRPL-ITPQTFVGQGASGKDGRTV-VSQPQ 506
QN Q D RAI+F ++ + ++ +L + L I GQ S + S+ +
Sbjct: 277 QNEQTSDFRAIIFVRTKKEADFLNYVLNDRLHELGIKSDWMSGQKKSTASSADISASKQK 336
Query: 507 QLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
Q+ ++ F G LV+T VAEEGLD+ L++ ++ +T VQR G
Sbjct: 337 QMEKLKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAH-VQRRG 387
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 40.3 bits (90), Expect = 0.011
Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 907 QIFSEKSNDNEFEKDEVNRENNFDIGELHDIFANSSP-----LDNFEAEKTDKPQENEKK 961
+ +S+ S E + +N NN+D L + + P + E+ KT +P+ NE++
Sbjct: 246 EYYSKTSRAFETLAENINCYNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEE 305
Query: 962 VLSF-FGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRSTTETHKPM 1017
+ + FG +S + + +D +CD P ++D++ ++ L++ S P+
Sbjct: 306 LKNLLFGRESPQFGEEEVQDESRSQCDSPLIEDVDDERRKTGDLLDLESAASIAFPI 362
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 40.3 bits (90), Expect = 0.011
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 600 NETKQNNENCKKGQKNIRSMLLSKSKEPSNT-TKKSKGKSELITNEQYGKLSP---ETIS 655
N+ +++ E G +++R S ++ +T T S S ++ + K +P E I
Sbjct: 948 NDRRKSRET-PPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYCKKSKETPMSYEEIE 1006
Query: 656 ENKYFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTEL 715
+ K + + + K + +E L+ S+ ++RTL+ T + D L T +
Sbjct: 1007 QQKKAKRQRNCKTREENRERKRLAQLE-ELESSETTGVRRTLRSTQDNSDPLDASLATTI 1065
Query: 716 LQFSKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQARKRQKITHSPGKK 766
+F KTKK + K+S+N ++ K P S H P K+
Sbjct: 1066 EEFRKTKKKDAKSSENRAKEKQ---KPMNKRPTSSASVDSNDDGVHIPAKR 1113
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ +R FR G+ L+AT VAE GLD+ VD ++ +D+
Sbjct: 642 QRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 683
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ +R FR G+ L+AT VAE GLD+ VD ++ +D+
Sbjct: 853 QRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 894
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ +R FR G+ L+AT VAE GLD+ VD ++ +D+
Sbjct: 853 QRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 894
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ +R FR G+ L+AT VAE GLD+ VD ++ +D+
Sbjct: 642 QRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 683
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ +R FR G+ L+AT VAE GLD+ VD ++ +D+
Sbjct: 642 QRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 683
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 38.7 bits (86), Expect = 0.032
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 488 FVGQGASGKDGRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIST 547
F G G + + Q Q+L + AFR+ ++ T VA GLD+ VDL++ ++
Sbjct: 357 FEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNV-P 415
Query: 548 RSPVRLVQRDGLNAK 562
+ P + R G +A+
Sbjct: 416 QCPKTYIHRVGRSAR 430
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.032
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 488 FVGQGASGKDGRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIST 547
F G G + + Q Q+L + AFR+ ++ T VA GLD+ VDL++ ++
Sbjct: 357 FEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNV-P 415
Query: 548 RSPVRLVQRDGLNAK 562
+ P + R G +A+
Sbjct: 416 QCPKTYIHRVGRSAR 430
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.032
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ +R FR G+ L+AT VAE GLD+ VD ++ +D+
Sbjct: 853 QRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 894
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.043
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ ++ FR+GA L+AT V E GLD+ VD ++ +D+
Sbjct: 599 QKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDM 640
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.043
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
Q ++ ++ FR+GA L+AT V E GLD+ VD ++ +D+
Sbjct: 599 QKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDM 640
>Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 995
Score = 37.5 bits (83), Expect = 0.075
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 12/123 (9%)
Query: 428 NLSFGHPKFYKLKEIMMEHFTKAQQNGQDTRAIVFCEYRESVNLVHCLLLQCRPLITPQT 487
NL F K K + K NG+ + I+F + ++ + C +T
Sbjct: 618 NLEFFECKGLAEKNAKLREILKQNVNGKTLKTIIFVQKKDQCDA-------CAAKLTSGG 670
Query: 488 FVGQGASGKDGRTVVSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIST 547
+ Q G SQ + +++ F++ N LV T + G+DV +D ++ FD+
Sbjct: 671 MLAQTLHGDR-----SQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPD 725
Query: 548 RSP 550
P
Sbjct: 726 GDP 728
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 37.5 bits (83), Expect = 0.075
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q ++ R + FR+G C LVAT VA GLD+ +V ++ +D+
Sbjct: 432 LKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDL 475
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.075
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q ++ R + FR+G C LVAT VA GLD+ +V ++ +D+
Sbjct: 416 LKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDL 459
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 37.5 bits (83), Expect = 0.075
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q ++ R + FR+G C LVAT VA GLD+ +V ++ +D+
Sbjct: 413 LKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDL 456
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 37.1 bits (82), Expect = 0.099
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNA 561
+SQ ++L + F++ A LV T VA GLD+ VD+++ +D+ ++S V R G A
Sbjct: 317 MSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSK-DYVHRVGRTA 375
Query: 562 K 562
+
Sbjct: 376 R 376
>AF100664-2|AAC68984.1| 665|Caenorhabditis elegans Hypothetical
protein M57.1 protein.
Length = 665
Score = 36.7 bits (81), Expect = 0.13
Identities = 25/131 (19%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 1213 MQDKFSVQIDSKRKLEMDDDEIASPYFNKKPKLTKSPDKQRTLKEKILASVSSFKVKQKF 1272
++ F QI++ K+++D +++ Y + ++ + + R +++K S + K+ QK
Sbjct: 332 VESDFLAQIEASGKVQLDKNQLIVKYTSNDGEI-ELGGETRLVEKKKRKSTNYHKMHQKR 390
Query: 1273 DNFHCSVS-QSNVLSQKENRNPQFASQFAKTTSATEKDVK--GNLEFLQNYRRDPNKLQQ 1329
SV+ +++++++ + ++ + + K EK++ +E + Y PN+ Q
Sbjct: 391 RKIIRSVTDETSLVAKWKRKSDSYYEMYQKRRKIGEKELSDTAEVEEVAPYDEAPNEDQD 450
Query: 1330 SLMNKFSTIFN 1340
+ +N F+ + N
Sbjct: 451 TQLNPFNAMSN 461
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q + VM+ FRAG L++T V GLDV V L++ +D+
Sbjct: 299 MEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDL 342
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q + VM+ FRAG L++T V GLDV V L++ +D+
Sbjct: 299 MEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDL 342
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 36.3 bits (80), Expect = 0.17
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q ++ +MR FR+G+ L+ T + G+DV V L++ +D+
Sbjct: 302 MDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDL 345
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 36.3 bits (80), Expect = 0.17
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q ++ +MR FR+G+ L+ T + G+DV V L++ +D+
Sbjct: 15 MDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDL 58
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 36.3 bits (80), Expect = 0.17
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
+ Q ++ +MR FR+G+ L+ T + G+DV V L++ +D+
Sbjct: 302 MDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDL 345
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein
H03E18.1 protein.
Length = 1147
Score = 35.9 bits (79), Expect = 0.23
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 12/186 (6%)
Query: 968 LDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTF----LNVRSTTETHKPMPDENPL 1023
LD ++ + E++ KK + + D TD+V + STTET KP + P
Sbjct: 717 LDKIDQVVESQEETEKKKKVTTKNSEHILD-TDEVLKKIEKVEATSTTETEKPTTETTPA 775
Query: 1024 SPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEIHRNSTPIAKKSLLFDKIDXXXXXXX 1083
+ ++ + E+ T+P Q+ K + +K + ++K ++
Sbjct: 776 TTTVTT----TTEETTTP--KKQEVKMKHMDEKALMEKINEASEKLEKSQEVTEEVTEAT 829
Query: 1084 XXXXXXXEDSMFTITQVL-ELINKTKDEKALASVATHSKTDINDNEDNLCVSPILPSQTE 1142
E+S T +L + N TKD +++S + + KT D + +L ++
Sbjct: 830 TEAITTTEESTTTAKLILNKKKNPTKDSGSVSSASGNGKTVAMKKTDQKTIETLLKAKIP 889
Query: 1143 RKKLTD 1148
D
Sbjct: 890 ESSNVD 895
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 35.5 bits (78), Expect = 0.30
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 623 KSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRETYLKDDSNVE 682
KS + S KS+ +S+ E+ K S S+ K + KE R T +D + +
Sbjct: 77 KSSKKSRKRAKSESESDESDEEEDRKKSK---SKKKVDQKKKEKSKKKRTTSSSEDEDSD 133
Query: 683 TNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSLASQEFLTKL 742
+ + ++T + T + E SE++ E + K+KKN+ K+ + + E +
Sbjct: 134 EEREQKSKKKSKKTKKQTSS-ESSEES---EEERKVKKSKKNKEKSVKKRAETSEESDED 189
Query: 743 QKPSPVKSKQARKRQK 758
+KPS K +K+ K
Sbjct: 190 EKPSKKSKKGLKKKAK 205
Score = 33.5 bits (73), Expect = 1.2
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 5/173 (2%)
Query: 601 ETKQNNENCKKGQKNIRSMLLSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYF 660
E +Q ++ K K S S+ E KKSK E ++ + S E+ + K
Sbjct: 135 EREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKR-AETSEESDEDEKPS 193
Query: 661 AEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSK 720
+ K+ ++ + +S E + SK + ++ ++ E TE + SK
Sbjct: 194 KKSKKGLKKKAKSESESESEDEKEVKKSK-KKSKKVVKKESESEDEAPEKKKTEKRKRSK 252
Query: 721 TKKNELKNSQNSLASQEFLTKLQKPSPVKSKQARKRQKITHSPGKKNGDIRAL 773
T E S+ S +E K P P K K+ +K++ + D+ L
Sbjct: 253 TSSEESSESEKSDEEEE--EKESSPKP-KKKKPLAVKKLSSDEESEESDVEVL 302
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 35.5 bits (78), Expect = 0.30
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 623 KSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRETYLKDDSNVE 682
KS + S KS+ +S+ E+ K S S+ K + KE R T +D + +
Sbjct: 77 KSSKKSRKRAKSESESDESDEEEDRKKSK---SKKKVDQKKKEKSKKKRTTSSSEDEDSD 133
Query: 683 TNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSLASQEFLTKL 742
+ + ++T + T + E SE++ E + K+KKN+ K+ + + E +
Sbjct: 134 EEREQKSKKKSKKTKKQTSS-ESSEES---EEERKVKKSKKNKEKSVKKRAETSEESDED 189
Query: 743 QKPSPVKSKQARKRQK 758
+KPS K +K+ K
Sbjct: 190 EKPSKKSKKGLKKKAK 205
Score = 33.5 bits (73), Expect = 1.2
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 5/173 (2%)
Query: 601 ETKQNNENCKKGQKNIRSMLLSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYF 660
E +Q ++ K K S S+ E KKSK E ++ + S E+ + K
Sbjct: 135 EREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKR-AETSEESDEDEKPS 193
Query: 661 AEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSK 720
+ K+ ++ + +S E + SK + ++ ++ E TE + SK
Sbjct: 194 KKSKKGLKKKAKSESESESEDEKEVKKSK-KKSKKVVKKESESEDEAPEKKKTEKRKRSK 252
Query: 721 TKKNELKNSQNSLASQEFLTKLQKPSPVKSKQARKRQKITHSPGKKNGDIRAL 773
T E S+ S +E K P P K K+ +K++ + D+ L
Sbjct: 253 TSSEESSESEKSDEEEE--EKESSPKP-KKKKPLAVKKLSSDEESEESDVEVL 302
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 35.1 bits (77), Expect = 0.40
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 504 QPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDIS 546
Q Q+ ++A + G + LVAT VA G+DV V L+L +D++
Sbjct: 609 QDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMA 651
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.70
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 76 TWIYPTNYPVRDYQFNIINAA---LVKNTLVSLPTGLGKT--FIAAVVMYNFYRWYPLGK 130
TW +P Y V F I + ++ ++ PTG GKT ++ V+ + + +
Sbjct: 132 TW-FPVQYAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQ 190
Query: 131 IVFTAPTRPLVAQQIDAC--YNIVA-IPPRDTIEMTGHMQTSTRKLHWQNKRVFFATPQV 187
V P + LVAQ +D +N + + ++ + R+L V ATP
Sbjct: 191 AVILVPVQTLVAQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPAR 250
Query: 188 IYNDIKSGICPG---DKIRCLVIDEAHRARK 215
+ + S I P K+R L++DEA R K
Sbjct: 251 LVQHLTSKIPPPIDLSKLRFLIVDEADRMGK 281
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 34.3 bits (75), Expect = 0.70
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 9/188 (4%)
Query: 892 KNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNRENNFDIGELHDIFANSSPLDNFEAEK 951
K S FD+ L ++ +EK N FE + V+ E + D+ ++ DI N + +
Sbjct: 894 KQASTGFDIILTSENGEKTEKVN---FEVEFVDSERSEDVEKVMDIVLNENTTEVSNLMN 950
Query: 952 TDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDI---EADKTDDVTFLNVR 1008
K + + +L F +++ + K I D+ +
Sbjct: 951 DWKNWKISRVILENANNSGNNTFFLEHKKLWRTKNATVSNAYIILESEDQEGSPKSFKLL 1010
Query: 1009 STTETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEIHRNSTPIAKK 1068
T + P + + +SP+ L + V P CS + L T +IH N+ I +
Sbjct: 1011 HVTTSPSPSSESSCISPAHL---ISPPSTVPLPSNCSNVKLQNLKTSLQIHENNLLIPTQ 1067
Query: 1069 SLLFDKID 1076
S L + +D
Sbjct: 1068 SELINHVD 1075
>AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 34.3 bits (75), Expect = 0.70
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1257 EKILASVSSFKVKQKFDNFHCSVSQSNVLSQKEN-RNPQFASQFAKTTSATEKDVKGNLE 1315
E+ + ++ K++Q F++F + QS+ L + FA+ T EK + G L
Sbjct: 462 EQFCINYTNEKLQQFFNHFMFAKEQSDYLEEGIKWTQVNFANHLQPTIDLIEKPM-GILS 520
Query: 1316 FLQNYRRDPNKLQQSLMNKF-STIFNNRSPEKLQSPQK 1352
FL+ PN ++SL+ K S + N+ S +K + QK
Sbjct: 521 FLEEECVVPNGSEKSLLEKLCSNLSNDSSFKKSKQTQK 558
>Z83228-6|CAB05731.1| 148|Caenorhabditis elegans Hypothetical
protein F52F12.5 protein.
Length = 148
Score = 33.9 bits (74), Expect = 0.92
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 610 KKGQKNIRSMLLSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYFAEHKEYWSM 669
+KG N+ + LS+ +P KKSKG + + E K S ET S+ + A+ K +
Sbjct: 8 RKGYDNVE-LSLSEDDDPVKEKKKSKGNEKKSSTESKSKESKET-SKEEDLAQKKFLMTQ 65
Query: 670 DRETYLKDDSNVE 682
++ +D+ V+
Sbjct: 66 KTQSMTEDEKEVK 78
>AF045639-1|AAC02565.1| 672|Caenorhabditis elegans Hypothetical
protein B0212.3 protein.
Length = 672
Score = 33.9 bits (74), Expect = 0.92
Identities = 21/104 (20%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 1213 MQDKFSVQIDSKRKLEMDDDEIASPYFNKKPKLTKSPDKQRTLKEKILASVSSFKVKQKF 1272
++ F QI+ K+++D++ + Y +K K+ K + R +++K S + K+ QK
Sbjct: 330 VESDFLAQIEESGKVQLDENHLIVKYTSKNRKI-KLGGETRLVEKKKRKSTNYHKMHQKR 388
Query: 1273 DNFHCSVS-QSNVLSQKENRNPQFASQFAKTTSATEKDVKGNLE 1315
SV+ +++++++ + ++ + + K EK++ E
Sbjct: 389 RKIIRSVTDETSLVAKWKRKSDSYYEMYQKRRKIGEKELSDTAE 432
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.92
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 502 VSQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFD 544
++Q + RV FR G C LV + + G+D+ +V++++ FD
Sbjct: 314 MAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFD 356
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 33.5 bits (73), Expect = 1.2
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 911 EKSNDNEFEKDEVNRENNFDIGELHDIFANSS-PLDNFEAEKTDKPQENEKKVLSFFGLD 969
E +D + EK E +E + + D LD+ + + DK ++K+ +
Sbjct: 813 EDEDDLDTEKKEKKKERKYQDDKDEDSNRKEPRSLDDEDKVELDKNFADKKEKKKGKWNE 872
Query: 970 SVEDIFADYEDSFDKKCDEPEMKDIEADKTDD 1001
EDIF D ++ K+ D + KD D DD
Sbjct: 873 DEEDIFEDRKEELPKESDRRDRKDRRHDDEDD 904
>Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 33.1 bits (72), Expect = 1.6
Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 9/199 (4%)
Query: 952 TDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKT-DDVTFLNVRST 1010
T+KP+ENE+KV+ + ++D+ D ED KK + + + D +D + +
Sbjct: 150 TEKPEENEEKVVGDEDEEDIDDVQEDDEDEAPKKKTKKAVSTSDDDDLHEDDSPKGGSVS 209
Query: 1011 TETHKPMPDENPLSP-SILSGRVKVKEQVTS--PILCSQKRKFELSTKKEIHRNSTPIAK 1067
E +P +++ P + + VKEQ S PI K EI ++S ++
Sbjct: 210 DEKEEPENEDDTEEPENEVEVESPVKEQADSGEPIENVNDDKASEPGVGEISQDSVDDSQ 269
Query: 1068 KSLLFDKIDXXXXXXXXXXXXXXEDSMFT--ITQVLELINKTKDEKALASVATHSKTDIN 1125
K L K S T +V ++ T K+++N
Sbjct: 270 KIGLDSKSPDGESEANEENQESQSSSRSTRRAKRVSATVSSTPSSNTPRRGGRGQKSEVN 329
Query: 1126 DNEDNLCVSPILPSQTERK 1144
+E +PI+ + T R+
Sbjct: 330 ADETK---TPIVSNSTPRR 345
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 951 KTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRST 1010
+TD + K+ +SF + +++ D KK P+ K+ +KT++ + T
Sbjct: 1343 QTDVREGTPKRRVSFAEEELPKEVIDS--DRKKKKSPSPDKKEKSPEKTEEKPASPTKKT 1400
Query: 1011 TETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEIHRNSTPIAK 1067
E K +++P SP+ + E+V SP ++K K S K+ S+P K
Sbjct: 1401 GEEVKSPKEKSPASPT-KKEKSPAAEEVKSP---TKKEKSPSSPTKKEKSPSSPTKK 1453
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 33.1 bits (72), Expect = 1.6
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 694 QRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQA 753
+R+ + V V+ S V EL + +TK EL++ N +QE + P KSK+
Sbjct: 258 RRSNAEPVEVKISSKDVSHAELEESMETKL-ELESRSNEKETQEPFNDPKLSKPKKSKKN 316
Query: 754 RKRQKITHSPGKKNGD 769
RK ++ T P +K +
Sbjct: 317 RKSEQTTAKPEEKESN 332
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 951 KTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRST 1010
+TD + K+ +SF + +++ D KK P+ K+ +KT++ + T
Sbjct: 1343 QTDVREGTPKRRVSFAEEELPKEVIDS--DRKKKKSPSPDKKEKSPEKTEEKPASPTKKT 1400
Query: 1011 TETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEIHRNSTPIAK 1067
E K +++P SP+ + E+V SP ++K K S K+ S+P K
Sbjct: 1401 GEEVKSPKEKSPASPT-KKEKSPAAEEVKSP---TKKEKSPSSPTKKEKSPSSPTKK 1453
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 951 KTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRST 1010
+TD + K+ +SF + +++ D KK P+ K+ +KT++ + T
Sbjct: 1343 QTDVREGTPKRRVSFAEEELPKEVIDS--DRKKKKSPSPDKKEKSPEKTEEKPASPTKKT 1400
Query: 1011 TETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEIHRNSTPIAK 1067
E K +++P SP+ + E+V SP ++K K S K+ S+P K
Sbjct: 1401 GEEVKSPKEKSPASPT-KKEKSPAAEEVKSP---TKKEKSPSSPTKKEKSPSSPTKK 1453
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 951 KTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRST 1010
+TD + K+ +SF + +++ D KK P+ K+ +KT++ + T
Sbjct: 1343 QTDVREGTPKRRVSFAEEELPKEVIDS--DRKKKKSPSPDKKEKSPEKTEEKPASPTKKT 1400
Query: 1011 TETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEIHRNSTPIAK 1067
E K +++P SP+ + E+V SP ++K K S K+ S+P K
Sbjct: 1401 GEEVKSPKEKSPASPT-KKEKSPAAEEVKSP---TKKEKSPSSPTKKEKSPSSPTKK 1453
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 32.7 bits (71), Expect = 2.1
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 561 AKLLQSNEIKESLYKRNPRMMPHDFTPKCQMLHITVAKRN----ETKQNN--ENCKKGQK 614
AKL +++ E K + D PK ++L K + ET + + E+ +
Sbjct: 9286 AKLESKSKMTEDTTKESDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAVESAGPSES 9345
Query: 615 NIRSML-LSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRET 673
+++ + K K+ T +K K ++E+ GK S E S+ + A+ K D
Sbjct: 9346 ETQNVAAVDKEKKQKETDEKQKLEAEIA-----GKKSTEQKSKLEAEAKLKRAAEEDAAK 9400
Query: 674 YLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSL 733
K+ + + ++ LEL++ Q +N D V L ++N+L+ ++ L
Sbjct: 9401 KQKEKTEAASKKAAAEKLELEKQAQ--INKAAEADAVKKQNELD----EQNKLEATKK-L 9453
Query: 734 ASQEFLTKLQKPSPVKSKQARKRQ 757
A+++ KL++ S KSKQA + Q
Sbjct: 9454 AAEKL--KLEEQSAAKSKQAAEEQ 9475
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.7 bits (71), Expect = 2.1
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 561 AKLLQSNEIKESLYKRNPRMMPHDFTPKCQMLHITVAKRN----ETKQNN--ENCKKGQK 614
AKL +++ E K + D PK ++L K + ET + + E+ +
Sbjct: 9306 AKLESKSKMTEDTTKESDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAVESAGPSES 9365
Query: 615 NIRSML-LSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRET 673
+++ + K K+ T +K K ++E+ GK S E S+ + A+ K D
Sbjct: 9366 ETQNVAAVDKEKKQKETDEKQKLEAEIA-----GKKSTEQKSKLEAEAKLKRAAEEDAAK 9420
Query: 674 YLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSL 733
K+ + + ++ LEL++ Q +N D V L ++N+L+ ++ L
Sbjct: 9421 KQKEKTEAASKKAAAEKLELEKQAQ--INKAAEADAVKKQNELD----EQNKLEATKK-L 9473
Query: 734 ASQEFLTKLQKPSPVKSKQARKRQ 757
A+++ KL++ S KSKQA + Q
Sbjct: 9474 AAEKL--KLEEQSAAKSKQAAEEQ 9495
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.7 bits (71), Expect = 2.1
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 561 AKLLQSNEIKESLYKRNPRMMPHDFTPKCQMLHITVAKRN----ETKQNN--ENCKKGQK 614
AKL +++ E K + D PK ++L K + ET + + E+ +
Sbjct: 9306 AKLESKSKMTEDTTKESDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAVESAGPSES 9365
Query: 615 NIRSML-LSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRET 673
+++ + K K+ T +K K ++E+ GK S E S+ + A+ K D
Sbjct: 9366 ETQNVAAVDKEKKQKETDEKQKLEAEIA-----GKKSTEQKSKLEAEAKLKRAAEEDAAK 9420
Query: 674 YLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSL 733
K+ + + ++ LEL++ Q +N D V L ++N+L+ ++ L
Sbjct: 9421 KQKEKTEAASKKAAAEKLELEKQAQ--INKAAEADAVKKQNELD----EQNKLEATKK-L 9473
Query: 734 ASQEFLTKLQKPSPVKSKQARKRQ 757
A+++ KL++ S KSKQA + Q
Sbjct: 9474 AAEKL--KLEEQSAAKSKQAAEEQ 9495
>AF100307-10|AAC68930.1| 295|Caenorhabditis elegans Hypothetical
protein T12B5.4 protein.
Length = 295
Score = 32.7 bits (71), Expect = 2.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1091 EDSMFTITQVLELINKTKDEKALASVATHSKTDINDNEDNLCVSPIL 1137
ED M + Q +L + K ++ L S+ S TDI N++NLCV IL
Sbjct: 97 EDLMAVMDQTSQLCFRNKRKELLNSIT--SVTDILKNKENLCVKEIL 141
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 510 VMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSP--VRLVQRDGLNAK 562
V++ F+AG ++AT VA GLDV + ++ +D S V + R G + K
Sbjct: 418 VLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDK 472
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical
protein C09G1.2 protein.
Length = 1115
Score = 32.3 bits (70), Expect = 2.8
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 599 RNETKQNNENCKKGQKNIRSM-LLSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISEN 657
+N K + K K I + + SK +EP+ KK++ ++E+ TN K+S +
Sbjct: 182 KNTVKNTHPKVDKDHKRIENQDISSKGQEPTCFQKKARLRTEIDTNYLPAKISIHSRENW 241
Query: 658 KYFAEHKEYWSMDRETYLKDDSNVETNLDMSK 689
EH E K +V T D+ K
Sbjct: 242 TRDREHLRRLLESEEPNPKKQKSVPTEHDLKK 273
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 32.3 bits (70), Expect = 2.8
Identities = 31/165 (18%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 597 AKRNETKQNNENCKKGQKNIRSMLLSKSKEPSNTTKKSKGKSELITNEQYGKLSPETISE 656
+K E+ Q +++ +K S + S E + TT+K +EL+ + + + ++ ++
Sbjct: 220 SKEAESIQASQDSDHVEKEGESETTTTSDESATTTEKKTNGAELVEKSETEEKNGDSSTK 279
Query: 657 NKYFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQRTLQD--TVNVEHSEDTVLLTE 714
+ + E LK +++ E +D ++ R L + N E E T +TE
Sbjct: 280 SPEVTSESSVDTTTIEEQLKSNNDEEKQVDGNEKESTFRVLNEDHNENEEIGEGTKKVTE 339
Query: 715 LLQFSKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQARKRQKI 759
+ + + E +N ++ +Q T + + K++ ++ K+
Sbjct: 340 --ETTTVETTERQNVDDTTENQTTQTTSSSYNAKEEKKSYRKCKV 382
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 32.3 bits (70), Expect = 2.8
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 22/178 (12%)
Query: 603 KQNNENCKK-GQKNIRSML---LSKSKEPSNTTKKSKGKSELITNEQYGKLSPETI---- 654
K+ +EN K G+ ++S L LS K +N K SK + GKLSPET+
Sbjct: 98 KELDENSLKIGKAQMQSCLQNELSALKSANNAMKTSKNGPAKEHRPENGKLSPETLDRGK 157
Query: 655 SENKYFAEHKEY-WSMDRE----TYLKDDSNVETNLDMSKWLELQRTLQDTVNVEHSEDT 709
EN+ + E+ S+D E T + +T D+ + E L+D +
Sbjct: 158 EENQEGRQDLEHRGSVDSELSALTQTPSQTPADTPSDVGESFEDLLVLEDNFQQPRPKSV 217
Query: 710 VLLTEL---------LQFSKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQARKRQK 758
VL +L K + E KNS+ + E +K + K+ R+ +K
Sbjct: 218 VLFPQLPDPHDDHNNTMSLKLRSAEKKNSELKKSLDEMKMNFKKFTREYEKEKRELEK 275
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical protein
C33D9.6 protein.
Length = 485
Score = 31.9 bits (69), Expect = 3.7
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 910 SEKSNDNEFEKDEVNREN----NFDIGELHDIFANSSPLDNFEAEKTDKPQENEKKVLSF 965
SE N + E++ +N F+I + +IF S + F ++ P KK
Sbjct: 308 SEIKNLIREQSKEIHEKNVKIAKFEIKDYANIFRQISK-NIFTNKEAPGPSGRPKKRRM- 365
Query: 966 FGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRSTTE 1012
+D ED+F +YED D K E K IE K D T +N +E
Sbjct: 366 --VDDPEDLFHNYEDLDDAKFLE-LAKIIETTKKDVTTLINTEGPSE 409
>Z22177-2|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 31.9 bits (69), Expect = 3.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNAK 562
S P + ++AF +++T V G+D+ +D ++ FD+ S V R G A+
Sbjct: 294 SNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSS-WFVHRAGRTAR 352
>AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical
protein K02F6.3 protein.
Length = 839
Score = 31.9 bits (69), Expect = 3.7
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 634 SKGKSELI-TNEQYGKLSPETISENKYFAEHKEYWS--MDRETYLKDDSNVETNLDMSKW 690
+KG+ + + NE Y K + + + +KYF E K+ + + R+T K+ S ++ D+ K
Sbjct: 473 TKGQIDAMRANETYKKFAEKVATASKYFDEIKQTGTSILIRDTN-KNMSIIKNMQDVLKR 531
Query: 691 LELQRTLQDTVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSLASQEFLTKLQK 744
L TL+ + + D+ L ++L++F + +++N A+ FL ++ K
Sbjct: 532 TNLITTLECLKDKKF--DSSLASDLMKFGSNIRAFGVHAKNDKATISFLDQISK 583
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 31.9 bits (69), Expect = 3.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 514 FRAGACNTLVATCVAEEGLDVGSVDLILCFDI 545
FR G LVAT VA GLD+ +V ++ +D+
Sbjct: 473 FRTGTAPILVATAVAARGLDIPNVKHVINYDL 504
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical protein
F18C12.3 protein.
Length = 545
Score = 31.5 bits (68), Expect = 4.9
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 953 DKPQENEKKVLSF--FGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRST 1010
+KP++ KK ++++ED+ + EDS ++K +E E + + D++ D+ L+ S
Sbjct: 245 NKPEKKSKKSTEKKELNIENLEDLNNEDEDSENEKEEEIEENEEDYDQS-DIEMLD--SD 301
Query: 1011 TETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEI 1058
E +N ++L G + V+E P L +KRK +E+
Sbjct: 302 EEEAGEEAAKN--RRNLLLGLIGVQEDKNRPSLAPKKRKLVEEEDEEV 347
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical protein
F18C12.3 protein.
Length = 545
Score = 31.5 bits (68), Expect = 4.9
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 953 DKPQENEKKVLSF--FGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRST 1010
+KP++ KK ++++ED+ + EDS ++K +E E + + D++ D+ L+ S
Sbjct: 245 NKPEKKSKKSTEKKELNIENLEDLNNEDEDSENEKEEEIEENEEDYDQS-DIEMLD--SD 301
Query: 1011 TETHKPMPDENPLSPSILSGRVKVKEQVTSPILCSQKRKFELSTKKEI 1058
E +N ++L G + V+E P L +KRK +E+
Sbjct: 302 EEEAGEEAAKN--RRNLLLGLIGVQEDKNRPSLAPKKRKLVEEEDEEV 347
>Z70205-4|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4 protein.
Length = 996
Score = 31.5 bits (68), Expect = 4.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 71 KLLGQTWIYPTNYPVRDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYN 121
KLL Q I+P YP F + + K L+ P+G GKT +A + N
Sbjct: 738 KLLEQVIIWPRKYP---QLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical protein
T05G5.1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 4.9
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 890 AEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNR----ENNFDIGELHDIFANSSPLD 945
AE+ + D E Q +E+S E ++E +R + D + D +
Sbjct: 159 AERRIQEQRVRDDERRRQHEAERSQIEERRREEESRRLAAQRETDEARVRDEERRRQETE 218
Query: 946 N-FEAEKTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTF 1004
E E DK ++ + + G D A+ ED +D + E D T+DVT
Sbjct: 219 KEVEKELNDKRTQSMNEQFEYEGGDEEYPQVAEKEDEYD--------EGYETDNTEDVT- 269
Query: 1005 LNVRSTTETHKPMPDEN 1021
+ TT+ KPM +E+
Sbjct: 270 ITTTKTTKLMKPMVEES 286
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 31.5 bits (68), Expect = 4.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 71 KLLGQTWIYPTNYPVRDYQFNIINAALVKNTLVSLPTGLGKTFIAAVVMYN 121
KLL Q I+P YP F + + K L+ P+G GKT +A + N
Sbjct: 738 KLLEQVIIWPRKYP---QLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 31.1 bits (67), Expect = 6.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 503 SQPQQLRVMRAFRAGACNTLVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDG 558
S ++ M FR G LV T + GLD+ V L++ +D+ T S V + R G
Sbjct: 410 SDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPT-SIVSYIHRVG 464
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 6.5
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 99 KNTLVSLPTGLGKTF---IAAV--VMYN-----FYRWYPLGKIVFTAPTRPLVAQQIDAC 148
+ +V PTG+GKT+ I A+ + N F P I+ A T LV Q + C
Sbjct: 31 RGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMASTSALVDQLFNRC 90
Query: 149 YNIVAIPPRDTIEMTGHMQTSTRKLHWQNKR----VFFATPQVIYNDIKSGICPGDKIRC 204
I+ + D +E ++ + + + F T + I+ G D ++
Sbjct: 91 ELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLKATIECGDVCLDNLKT 150
Query: 205 LVIDEAHRARKNYAYCQIINALDD 228
+++DEA + N A+ IN + D
Sbjct: 151 IILDEADKMIDNCAFVPDINWILD 174
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 31.1 bits (67), Expect = 6.5
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 903 EFDSQIFSEKSNDNEFEKDEVNRENNFDIGELHDIFANSSPLDNFEAEKTDKPQENEKKV 962
E D+Q E ++ E D+V +++ + + D + P D + K E +K
Sbjct: 3753 EDDAQAPKEDPKEDGKEDDQVEEDDDQENVDERDRENDERPEDQMDTSDPSKDDEIPEKG 3812
Query: 963 LSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEADKTDDVTFLNVRSTTETHKPMPD 1019
+D ED D D DK+ +E D E D+ +D + T+T++ D
Sbjct: 3813 ----EIDEAED--EDDGDETDKEDEEAIEGDGEEDQNEDQNDQELEDPTQTNEENED 3863
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 514 FRAGACNTLVATCVAEEGLDVGSVDLILCFD 544
F+ G LVAT VA GLDV ++ L++ +D
Sbjct: 598 FKTGVIKVLVATSVAARGLDVKNLILVVNYD 628
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 99 KNTLVSLPTGLGKTFIAAVVM 119
+N ++SLPTG GKT IA V+M
Sbjct: 185 ENCILSLPTGAGKTLIAEVLM 205
>Z93389-6|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 30.7 bits (66), Expect = 8.6
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 877 EDRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNRENNFDIGE--L 934
E++ + K + E+ + + D EK D E ++D+ N+E+N E
Sbjct: 94 EEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKDGEKKEDDENKEDNEKKKEEKK 153
Query: 935 HDIFANSSPLDNFEAEKTDKPQ---ENEKKVLSFFGLDSVEDIFADYEDSFDKK 985
D + E + TDK Q + KK + + ++ED+ +D++DS KK
Sbjct: 154 EDEKPKKEEIVPQEQKYTDKEQAIADGVKKKRTDY--PTMEDVASDWDDSKKKK 205
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 30.7 bits (66), Expect = 8.6
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 870 EYRNRAVEDRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNRENNF 929
E+ + ++D+A D ++ + NV F+ D E D ++ E+ + + E+D + F
Sbjct: 19 EFDDEQIDDQAERD-GWNEVID-NVG-EFE-DEEVDEEVDEEEDHAEDEERDTDDEVEGF 74
Query: 930 DIGELHDIFANSSPLDNFEAEKTDKPQENEKKVLSFFGLDSV-EDIFADYEDSFDKK 985
D + DI P +F +K PQ+ E L + V +++ E+S ++
Sbjct: 75 DKEIVSDIDDEEVPQIDFGYDKNGDPQQLESPALQRIDVGIVLDELLETIEESHKER 131
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 30.7 bits (66), Expect = 8.6
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 870 EYRNRAVEDRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNRENNF 929
E+ + ++D+A D ++ + NV F+ D E D ++ E+ + + E+D + F
Sbjct: 19 EFDDEQIDDQAERD-GWNEVID-NVG-EFE-DEEVDEEVDEEEDHAEDEERDTDDEVEGF 74
Query: 930 DIGELHDIFANSSPLDNFEAEKTDKPQENEKKVLSFFGLDSV-EDIFADYEDSFDKK 985
D + DI P +F +K PQ+ E L + V +++ E+S ++
Sbjct: 75 DKEIVSDIDDEEVPQIDFGYDKNGDPQQLESPALQRIDVGIVLDELLETIEESHKER 131
>Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical protein
K08E3.2 protein.
Length = 276
Score = 30.7 bits (66), Expect = 8.6
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 878 DRASPDVNKTDLAEKNVSANFDLDLEFDSQIFSEKSNDNEFEKDEVNRENNFDIGELHDI 937
++ + + T +++ + L LE D + +K E E++E + D E D
Sbjct: 36 EKHAESLTATPVSKSPAPVSKSLALEKDEDVEKKKEKGEEKEEEEKGEKKKEDKEEKKDD 95
Query: 938 FANSSPLDNFEAEKTDKPQENEKKVLSFFGLDSVEDIFADYEDSFDKKCDEPEMKDIEAD 997
++ E +KT + +EN +K E+ + ++ D+K D E KD E D
Sbjct: 96 SKEDKKDEDHEKKKTAEEKENNEK--------KDENKNKNKDERKDEKKD--EKKDDEKD 145
Query: 998 KTDD 1001
+ +D
Sbjct: 146 ERND 149
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical protein
M01A8.2b protein.
Length = 869
Score = 30.7 bits (66), Expect = 8.6
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 1207 DKVSSLMQDKFSVQIDSKRKLEMDDDEIASPYFNKKPKLTKSPDKQRTLKEKILASVSSF 1266
D S K S +++ K ++ ++ A P K P K+P K + + E++ AS+ +
Sbjct: 259 DTKSDKSPTKKSQKMEEKPVVKKKEEPAAPPPPPKFPVKQKAPSKHQLMMEQLKASIEAE 318
Query: 1267 KVKQK 1271
K K K
Sbjct: 319 KTKPK 323
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical protein
M01A8.2a protein.
Length = 937
Score = 30.7 bits (66), Expect = 8.6
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 1207 DKVSSLMQDKFSVQIDSKRKLEMDDDEIASPYFNKKPKLTKSPDKQRTLKEKILASVSSF 1266
D S K S +++ K ++ ++ A P K P K+P K + + E++ AS+ +
Sbjct: 327 DTKSDKSPTKKSQKMEEKPVVKKKEEPAAPPPPPKFPVKQKAPSKHQLMMEQLKASIEAE 386
Query: 1267 KVKQK 1271
K K K
Sbjct: 387 KTKPK 391
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 30.7 bits (66), Expect = 8.6
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Query: 635 KGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQ 694
K K +TN + G + E SE + + + S+ T++ NV+ +
Sbjct: 292 KSKVGSVTNHKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDFSAAS 351
Query: 695 RTLQDTVNVEHSE-DTVLLTELLQF-SKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQ 752
+ N + ++ D +++E L + +K+K + N+ + A QK + +
Sbjct: 352 PKVGSKTNYQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAGGNVQILSQKLNWKAESK 411
Query: 753 ARKRQKITHSPGKKNGDI 770
+ + H PG N I
Sbjct: 412 VGSKDNMNHRPGGGNVQI 429
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 30.7 bits (66), Expect = 8.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 700 TVNVEHSEDTVLLTELLQFSKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQARKRQ 757
+VN++H + + L Q KT +Q S S KL++ +K KQ R+R+
Sbjct: 271 SVNLDHLKTKPAKSTLDQHQKTSSTSSNGNQKSGLSSSEREKLREKEKLKEKQERQRE 328
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 30.7 bits (66), Expect = 8.6
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Query: 635 KGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQ 694
K K +TN + G + E SE + + + S+ T++ NV+ +
Sbjct: 270 KSKVGSVTNHKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDFSAAS 329
Query: 695 RTLQDTVNVEHSE-DTVLLTELLQF-SKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQ 752
+ N + ++ D +++E L + +K+K + N+ + A QK + +
Sbjct: 330 PKVGSKTNYQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAGGNVQILSQKLNWKAESK 389
Query: 753 ARKRQKITHSPGKKNGDI 770
+ + H PG N I
Sbjct: 390 VGSKDNMNHRPGGGNVQI 407
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 30.7 bits (66), Expect = 8.6
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Query: 635 KGKSELITNEQYGKLSPETISENKYFAEHKEYWSMDRETYLKDDSNVETNLDMSKWLELQ 694
K K +TN + G + E SE + + + S+ T++ NV+ +
Sbjct: 292 KSKVGSVTNHKAGGGNVEIFSEKRLYNAQSKVGSLKNATHVAGGGNVQIENRKLDFSAAS 351
Query: 695 RTLQDTVNVEHSE-DTVLLTELLQF-SKTKKNELKNSQNSLASQEFLTKLQKPSPVKSKQ 752
+ N + ++ D +++E L + +K+K + N+ + A QK + +
Sbjct: 352 PKVGSKTNYQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAGGNVQILSQKLNWKAESK 411
Query: 753 ARKRQKITHSPGKKNGDI 770
+ + H PG N I
Sbjct: 412 VGSKDNMNHRPGGGNVQI 429
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 30.7 bits (66), Expect = 8.6
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 504 QPQQLRVMRAFRAGACNT--LVATCVAEEGLDVGSVDLILCFDISTRSPVRLVQRDGLNA 561
Q QQ R F+ T L+ T VA GLD+ +VD I+ +D T P + R G A
Sbjct: 348 QKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYD-PTDEPREYIHRVGRTA 406
Query: 562 K 562
+
Sbjct: 407 R 407
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 30.7 bits (66), Expect = 8.6
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 649 LSPETISENKYFAEHKEY----WSMDRETYLKDDSNVETNLDMS 688
L PET+ N +H + W++D+E+Y DD ++E + +++
Sbjct: 486 LRPETVRSNSKDQKHLDSSDFSWAVDQESYETDDEDIEEDYELA 529
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,531,359
Number of Sequences: 27539
Number of extensions: 1578692
Number of successful extensions: 5546
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 5339
Number of HSP's gapped (non-prelim): 268
length of query: 1553
length of database: 12,573,161
effective HSP length: 91
effective length of query: 1462
effective length of database: 10,067,112
effective search space: 14718117744
effective search space used: 14718117744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
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