GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002426-TA|BGIBMGA002426-PA|IPR001382|Glycoside
hydrolase, family 47
         (539 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   2.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   6.8  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    25   6.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 307 DEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGWVIEEKMEHLSCF 355
           D+Q R M +TA  A ++++          LA+ + G   + +++H  CF
Sbjct: 704 DDQDRRMIETATDAMIEQVAIYREVEKLLLAKCRNGEPPDWELKHADCF 752


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 6.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 86  YKLYAWGKNELNPISKRAHLSSVFGSGEMGATIVDG 121
           + LY W K ELN +   A     +G      TI+ G
Sbjct: 93  FVLYRWNKKELNELLVAAKYHDEYGYALSNNTILFG 128


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 6.8
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 112 GEMGATIVDGLDTLYVMGLTDEFREGRD-WIAEHFNINE-----IDSELSVFETTIRFVG 165
           G+     ++    LY++G++  F      W+ EH    +     +DS LSV   T   VG
Sbjct: 19  GKARGADINSSRNLYILGVSFFFPLVLCLWLQEHPGAIQTGNQTVDSTLSVLLGTTILVG 78

Query: 166 GLLSC 170
           G+L C
Sbjct: 79  GVLGC 83


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,598
Number of Sequences: 2123
Number of extensions: 20078
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 4
length of query: 539
length of database: 516,269
effective HSP length: 67
effective length of query: 472
effective length of database: 374,028
effective search space: 176541216
effective search space used: 176541216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)