GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002426-TA|BGIBMGA002426-PA|IPR001382|Glycoside
hydrolase, family 47
         (539 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73906-1|CAA98114.1|  540|Caenorhabditis elegans Hypothetical pr...   460   e-129
Z78012-5|CAB01415.1|  590|Caenorhabditis elegans Hypothetical pr...   460   e-129
U41272-1|AAA82446.2|  584|Caenorhabditis elegans Hypothetical pr...   281   7e-76
Z68270-2|CAA92567.1|  532|Caenorhabditis elegans Hypothetical pr...   281   9e-76
Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical pr...   144   1e-34
Z81497-2|CAB04078.1|  781|Caenorhabditis elegans Hypothetical pr...   143   2e-34
Z68882-3|CAA93106.2|  568|Caenorhabditis elegans Hypothetical pr...   135   6e-32
Z68751-7|CAA92977.2|  319|Caenorhabditis elegans Hypothetical pr...    29   6.3  
U80441-5|AAB37654.1|  207|Caenorhabditis elegans Atp synthase su...    29   6.3  
U80441-4|AAR25649.1|  228|Caenorhabditis elegans Atp synthase su...    29   6.3  
AC024859-12|AAK29966.1|  477|Caenorhabditis elegans Hypothetical...    29   6.3  

>Z73906-1|CAA98114.1|  540|Caenorhabditis elegans Hypothetical
           protein D2030.1 protein.
          Length = 540

 Score =  460 bits (1134), Expect = e-129
 Identities = 212/446 (47%), Positives = 300/446 (67%), Gaps = 4/446 (0%)

Query: 77  EMMRHAWNNYKLYAWGKNELNPISKRAHLSSVFGSGEMGATIVDGLDTLYVMGLTDEFRE 136
           +M++ AW+ Y+ YAWG+NEL P S+  H SS+FG G+ GATI+D +DTLY++GL +E++E
Sbjct: 95  QMIKFAWDGYRKYAWGENELRPNSRSGHSSSIFGYGKTGATIIDAIDTLYLVGLKEEYKE 154

Query: 137 GRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADALLPAFET 196
            RDWIA+         +LSVFET IRF GGLLS +ALTGD +F  KA +VA  LLPAFET
Sbjct: 155 ARDWIADFDFKTSAKGDLSVFETNIRFTGGLLSAFALTGDKMFLKKAEDVATILLPAFET 214

Query: 197 PTGLPYALINPSTKASRQYHWADSNSILSELGTLHLEFSYLSDVTGREVYKNKVDKIREV 256
           P+G+P +LI+  T  S+ Y WA   +ILSE G++ LEF YLS++TG  V+  K DKIR+V
Sbjct: 215 PSGIPNSLIDAQTGRSKTYSWASGKAILSEYGSIQLEFDYLSNLTGNPVFAQKADKIRDV 274

Query: 257 LYTIEKPGDLYPNYIN-PRTGQWGQRHISLGALGDSFYEYLLKAWLASNRGDEQARTMFD 315
           L  +EKP  LYP YI      +WGQ   S+GA+ DS+YEYLLK W+A+ + D++ +  ++
Sbjct: 275 LTAMEKPEGLYPIYITMDNPPRWGQHLFSMGAMADSWYEYLLKQWIATGKKDDRTKREYE 334

Query: 316 TAMQAALDKML-RVSPSGLAYLAELKYGWVIEEKMEHLSCFAGGMFALAATTLEN-SFSE 373
            A+ A   +ML +   S L Y A++  G  +E   EHL+CF+GGM  L A   +N + S+
Sbjct: 335 EAIFAMEKRMLFKSEQSNLWYFAKMN-GNRMEHSFEHLACFSGGMVVLHAMNEKNKTISD 393

Query: 374 RYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSDEKVYLLRPETFESYFIM 433
            YM + +++ HTCHESY RS T +GPE+F+F+++VEA+ ++  +  Y+LRPE  E++F +
Sbjct: 394 HYMTLGKEIGHTCHESYARSTTGIGPESFQFTSSVEAKTERRQDSYYILRPEVVETWFYL 453

Query: 434 WRLTKEQKYRDWGWEAVQALEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAETXXXXX 493
           WR TK++KYR W W+ VQ LE++C+   GY+G+ NVY  +P+ DDVQQS+  AE      
Sbjct: 454 WRATKDEKYRQWAWDHVQNLEEYCKGTAGYSGIRNVYESSPEQDDVQQSFLFAELFKYLY 513

Query: 494 XXXXXXXXXXXXEWVFNTEAHPLPIK 519
                       +WVFNTEAHP  I+
Sbjct: 514 LIFSEDNILPLDQWVFNTEAHPFRIR 539


>Z78012-5|CAB01415.1|  590|Caenorhabditis elegans Hypothetical
           protein C52E4.5 protein.
          Length = 590

 Score =  460 bits (1133), Expect = e-129
 Identities = 230/500 (46%), Positives = 317/500 (63%), Gaps = 6/500 (1%)

Query: 22  VQTFNAGQGTSVHPASRLAREARSLQSNQIEAGNSSSYSGALDSQSSVEKQRHIIEMMRH 81
           V++   G+ TS  P      +A    S  +E      +    D ++ + +Q+ + EMM H
Sbjct: 91  VESKPPGEKTSTEPEETGVGKAPIQTSEGLEKLIGKIHYENKDEENDLRRQK-VKEMMIH 149

Query: 82  AWNNYKLYAWGKNELNPISKRAHLSSVFGSGEMGATIVDGLDTLYVMGLTDEFREGRDWI 141
           AW  YK Y+WG NEL P+SK+ +  ++FG  +M ATIVD  DTL++M L D+++E RD+I
Sbjct: 150 AWEGYKNYSWGANELRPMSKKPNSQNIFGGSQMPATIVDAADTLFIMDLKDKYKEARDYI 209

Query: 142 AEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADALLPAFETPTGLP 201
             +F++ +  S LSVFETTIRF+GGLLS YALT ++ + +KA EV +ALLPAF TP+G+P
Sbjct: 210 ENNFSMAKSTSTLSVFETTIRFLGGLLSLYALTQESFYIEKAREVGEALLPAFNTPSGIP 269

Query: 202 YALINPSTKASRQYHWAD-SNSILSELGTLHLEFSYLSDVTGREVYKNKVDKIREVLYTI 260
            + ++ ++K +  Y WA+   SILSE+G+LHLEF YLS ++   +++ KV K+R+ L   
Sbjct: 270 KSNLDVASKHASNYGWANGGQSILSEIGSLHLEFLYLSRISNAPIFEKKVKKVRDALEKA 329

Query: 261 EKPGDLYPNYINPRTGQWGQRHISLGALGDSFYEYLLKAWLASNRGDEQARTMFDTAMQA 320
           EKP  LY NYINP TG++   H+SLGALGDSFYEYL+K+++ SN  D QA+ M+     A
Sbjct: 330 EKPNGLYSNYINPDTGKFTGSHMSLGALGDSFYEYLIKSYVQSNYTDTQAKNMYWDVSDA 389

Query: 321 ALDKMLRVS-PSGLAYLAELKYGWVIEEKMEHLSCFAGGMFALAATTLENSFSE-RYMDV 378
               M++VS  S L Y  EL  G   + KM HL+CF  GMFAL A   +    + R M +
Sbjct: 390 IQKHMIKVSKQSNLTYTVELNNGQA-QHKMGHLACFVPGMFALQAINEDTEEEKLRIMTL 448

Query: 379 ARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSDEKVYLLRPETFESYFIMWRLTK 438
           A +L  TCHESY RSET +GPE F F+   EA   K  E  Y+ RPE  E +F +WRLT 
Sbjct: 449 AEELAKTCHESYIRSETHIGPEMFYFNERDEA-TSKHSENGYIQRPEVIEGWFYLWRLTG 507

Query: 439 EQKYRDWGWEAVQALEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAETXXXXXXXXXX 498
           +  YRDW W+AVQA+EK+CRV+ G+TGL NVY+     +DV QS+FLAE           
Sbjct: 508 KTMYRDWVWDAVQAIEKYCRVDSGFTGLQNVYNPKAGREDVMQSFFLAEFLKYAYLTFAD 567

Query: 499 XXXXXXXEWVFNTEAHPLPI 518
                  +WVFNTEAHP+P+
Sbjct: 568 ESLISLDKWVFNTEAHPVPV 587


>U41272-1|AAA82446.2|  584|Caenorhabditis elegans Hypothetical
           protein T03G11.4 protein.
          Length = 584

 Score =  281 bits (690), Expect = 7e-76
 Identities = 161/458 (35%), Positives = 252/458 (55%), Gaps = 21/458 (4%)

Query: 70  EKQRHIIEMMRHAWNNYKLYAWGKNELNPISKRAHLSSVFGSGEMGATIVDGLDTLYVMG 129
           ++Q+ +++  +HAW  YK YAWG + L P+SK    S  F   + G TIVDGLDT  +MG
Sbjct: 136 DRQKAVVKAFQHAWIGYKKYAWGHDTLKPVSKS--YSDWF---DTGLTIVDGLDTAIIMG 190

Query: 130 LTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADA 189
           L DE  E  +WI       E D  ++ FE TIR +GG++S + LTG  +F +K+ ++ D 
Sbjct: 191 LEDEATEATEWIQNTLTF-EKDRMVNFFECTIRVLGGMMSAFHLTGKKMFLEKSVDLGDR 249

Query: 190 LLPAFETPTGLPYALINPSTKASRQYHWADSNSILSELGTLHLEFSYLSDVTGREVYKNK 249
           LL AF++P+ +PY+ +N   + +    W  ++S LSE+ T+ LE+  LS  +G   Y++ 
Sbjct: 250 LLSAFKSPSPIPYSDVNLLKRTATNPQWG-ADSSLSEVTTVQLEYRALSRASGNSTYEDL 308

Query: 250 VDKIREVLYTI--EKPGDLYPNYINPRTGQWGQ-RHISLGALGDSFYEYLLKAWLASNRG 306
              + + ++ I  E    L   +IN  TG + +   I+ GA  DSFYEYL K W+ + + 
Sbjct: 309 TFNVFKHIHKIGCETHEGLCGMFINANTGNFKKDSTITFGARSDSFYEYLFKQWIQTGKT 368

Query: 307 DEQARTMFDTAMQAALDKMLRVS-PSGLAYLAELKYGWVIEEKMEHLSCFAGGMFALAAT 365
            +  +  +  AM+A    + R S P+ + ++ EL  G     KM+HL CF  G  +  + 
Sbjct: 369 IDWLKEDYGKAMKAMEKYLYRNSKPNKMFFIGELLSGQTYSPKMDHLVCFIAGTLSQGS- 427

Query: 366 TLENSFSERYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQ---KSDEKVYLL 422
             ++ F  +++D+A K+  TCH  Y  + T LGPE   F N +  +     K  +   LL
Sbjct: 428 --QHGFPRKHLDMAEKIGETCHNMY-DNPTGLGPEIAHF-NMIPGKEDLYVKPLDAHCLL 483

Query: 423 RPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRV-EGGYTGLTNVYHQNPQGDDVQQ 481
           RPE  E++F ++R T ++KY++WGW A QA+EK+ R+  GGY+ ++NV   N +  D  +
Sbjct: 484 RPEAIEAWFYLYRFTGDKKYQEWGWSAFQAIEKYARIPTGGYSSISNVKQINVRFRDSME 543

Query: 482 SYFLAETXXXXXXXXXXXXXXX-XXEWVFNTEAHPLPI 518
           S+ L ET                  +WVF TE HPLPI
Sbjct: 544 SFLLGETFKYLYLLLGDDQTVLPLDKWVFTTEGHPLPI 581


>Z68270-2|CAA92567.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC410.3 protein.
          Length = 532

 Score =  281 bits (689), Expect = 9e-76
 Identities = 168/461 (36%), Positives = 265/461 (57%), Gaps = 23/461 (4%)

Query: 70  EKQRHIIEMMRHAWNNYKLYAWGKNELNPISKRAHLSSVFGSGEMGATIVDGLDTLYVMG 129
           E+Q+ I+   +HAW+ YK YAWG +EL P+SKR      FG   +G TI+D LDT  +MG
Sbjct: 81  ERQKAIVRAFQHAWSGYKKYAWGHDELRPVSKR--FDDSFG---LGLTIIDSLDTAIIMG 135

Query: 130 LTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADA 189
           L +E R+G +WI E+ N++   S ++VFETTIR +GGLLS Y LTG+    +KA ++ D 
Sbjct: 136 LEEETRDGVEWIRENLNVSPARS-VNVFETTIRVLGGLLSGYHLTGEEALLEKATQLGDN 194

Query: 190 LLPAFETPTGL-PYALINPSTKASRQYHWADSNSILSELGTLHLEFSYLSDVTGREVYKN 248
           L+ AF   + L P + +N     +   +  D +S L+E  TL LEF  L+ +TG + Y++
Sbjct: 195 LIKAFTKSSSLIPKSDVNLDNGNACSPN-RDLSS-LAEATTLQLEFRDLTALTGDQKYED 252

Query: 249 KVDKIREVLYTI--EKPGDLYPNYINPRTGQWGQRHISLGALGDSFYEYLLKAWLASNRG 306
                 E ++ +  +K   L P YI+ + G++ +  I+LGA  DS+YEYL+K WL + + 
Sbjct: 253 VAFGASEHVHNVGCKKMDGLCPFYIDGK-GEFKKSSITLGARADSYYEYLIKQWLQTKKS 311

Query: 307 DEQARTMFDTAMQAALDKMLRVS-PSGLAYLAELKYGWVIEEKMEHLSCFAGGMFALAAT 365
            +  R  F  ++ A    + R S P+ + +L E+        KM+HL CF  G   L+  
Sbjct: 312 IDWLRDDFIQSIAAMKKHLYRQSQPNSIWFLGEITELAQFYPKMDHLVCFLSGSLVLSHL 371

Query: 366 TLENSFSERYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSDEKVY----- 420
              +  +E ++++A+ + + CH+ Y  + T LGPE   F+    +   ++D  V      
Sbjct: 372 NGLDHDNE-HLEMAKNIGNVCHKMY-ENPTGLGPEIIHFNMEDSSDMTQADTYVKNLDAH 429

Query: 421 -LLRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVE-GGYTGLTNVYHQNPQGDD 478
            LLRPE  E++F ++R+TK++KY++WGW+A +++EK+ +VE GGY+ + NV  +  +  D
Sbjct: 430 SLLRPEAIEAWFYLYRVTKDKKYQEWGWKAFESIEKYAKVETGGYSSIDNVLRKKIKRRD 489

Query: 479 VQQSYFLAETXXXXXXXXXXXXXXXXXE-WVFNTEAHPLPI 518
             +S+FLAET                 + WV NTEAHPLPI
Sbjct: 490 KMESFFLAETLKYLYLLMADDQEILPLDRWVLNTEAHPLPI 530


>Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical
           protein ZC506.1 protein.
          Length = 931

 Score =  144 bits (350), Expect = 1e-34
 Identities = 135/476 (28%), Positives = 210/476 (44%), Gaps = 61/476 (12%)

Query: 72  QRHIIEMMRHAWNNYKLYAWGKNELNPISKRAHLSSVFGS--------GEMGATIVDGLD 123
           Q+   +M  H +N+Y  YA+  +EL P+S +  +  V  S        G    T++D LD
Sbjct: 30  QKEAYDMFMHGYNSYMNYAFPADELMPLSCKGRIRGVTPSRGDVDDVLGNFSVTLLDSLD 89

Query: 124 TLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYAL---------- 173
           TL VM   DEF +  D + +H   +  D  +SVFET IR +GGL+S + L          
Sbjct: 90  TLVVMNELDEFEKAIDLVIKHVRFDS-DHVVSVFETNIRVLGGLISAHVLAELVKEKYPN 148

Query: 174 ---TGDTIFRDKAAEVADALLPAFETPTGLPYALINPSTKASRQYHWADSNSILSELG-T 229
              T D      A EV + LLPAF T +GLP++ IN   K   Q H        +  G T
Sbjct: 149 RLTTYDNQLLKMATEVGNRLLPAFNTTSGLPFSRIN--LKHGMQDHLKRQKDTCTACGGT 206

Query: 230 LHLEFSYLSDVTGREVYKNKVDKIREVLYTIE-KPGDLYPNYINPRTGQWGQRHISLGAL 288
           + LEF+ L+ +TG  +Y+ K  K  + L+    +  DL    +N  +G W +R   +GA 
Sbjct: 207 MILEFAALTSLTGDPIYEKKARKAMDFLWQQRHRSSDLMGTVLNVHSGDWTRRESGIGAG 266

Query: 289 GDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGWVIEEK 348
            DS+YEY LKA++    GDE     F+   +A    + R    G  ++    +   +  +
Sbjct: 267 IDSYYEYTLKAYIL--LGDESYLDRFNKHYEA----IKRYINKGPIFVDVHMHRPTVATR 320

Query: 349 --MEHLSCFAGGMFALAATTLENSFSERYMDVARKLTHTCHESYFR--SETKLGPEAFRF 404
             M+ L  F  G+  L              DV   +    HE  F+   + K  PEAF  
Sbjct: 321 GFMDSLLAFWPGLQVLKG------------DVKEAI--EMHEMLFQVIQKHKFLPEAFTH 366

Query: 405 SNAVEARAQKSDEKVYLLRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVEGGYT 464
              V           + +RPE  ES + ++R TK+  Y     + + ++ K+ +V  G+ 
Sbjct: 367 DFQVHWAE-------HPIRPEFVESTYFLYRATKDPHYLHVAKQIMDSINKYVKVPCGFA 419

Query: 465 GLTNVYHQNPQGDDVQQSYFLAETXXXXXXXXX--XXXXXXXXEWVFNTEAHPLPI 518
            L ++  +    +D  +S+ L+ET                    +V  TEAH LP+
Sbjct: 420 ALKDI--RTMVKEDQMESFVLSETFKYLYMIFTDPEDLMFDPDHYVLTTEAHFLPL 473


>Z81497-2|CAB04078.1|  781|Caenorhabditis elegans Hypothetical
           protein F10C2.5 protein.
          Length = 781

 Score =  143 bits (347), Expect = 2e-34
 Identities = 133/463 (28%), Positives = 212/463 (45%), Gaps = 50/463 (10%)

Query: 43  ARSLQSNQIEAGNSSSYSGALDSQSSVEKQRHIIE-MMRHAWNNYKLYAWGKNELNPISK 101
           A  +Q++       +  S    + S ++  R  ++ M  HA+N Y  +A+  +EL PI+ 
Sbjct: 13  ASIIQASDDSEAPDNKKSSIRFTPSVIDSYREKVQKMFYHAYNGYLDHAFPLDELKPITC 72

Query: 102 RAHLSSVFGSGEMGATIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTI 161
                  +GS  +  +++D LDTL VMG T EFR     + E    ++ +  +SVFET I
Sbjct: 73  VGQ--DTWGSFSL--SLIDALDTLLVMGNTTEFRRAVSLVLEKAR-DDANVNVSVFETNI 127

Query: 162 RFVGGLLSCYALTG--------------DTIFRDKAAEVADALLPAFETPTGLPYALINP 207
           R VGGL+S + L G              D+     A ++AD L+PAF T TG+PY  +N 
Sbjct: 128 RVVGGLISAHMLAGRHKDLVVDWEGYPCDSPLLKLAVKMADRLMPAFNTETGMPYGTVNL 187

Query: 208 STKASRQYHWADSNSILSELGTLHLEFSYLSDVTGREVYKNKVDKIREVLYTIEKPGDLY 267
                +        +  + +GT  +EF  LS +TG + Y+    K  + L++   P  L 
Sbjct: 188 KYGVHKD---ETPITCTAGVGTFLIEFGTLSRLTGDDKYEKVALKALDALWSTRSPIGLV 244

Query: 268 PNYINPRTGQWGQRHISLGALGDSFYEYLLK-AWLASNRGDEQARTMFDTAMQAALDKML 326
            N+IN +TGQW      +GA  DS++EYL K A+L   R     +   + A   +++K +
Sbjct: 245 GNHINVQTGQWTATDSGIGAGVDSYFEYLAKGAYLF--RRPSLMKQFHEHA--TSINKHV 300

Query: 327 RVSPSGLAYLAELKYGWVIEEKMEHLSCFAGGMFALAATTLENS-FSERYMDVARKLTHT 385
           R       +++  K G V     + L  F  G   +     + S     Y +V RK    
Sbjct: 301 R-KGEWFMWVSMAK-GSVSLPIFQSLEAFWPGTLTMVGDVQDASRIMLTYSEVIRKY--- 355

Query: 386 CHESYFRSETKLGPEAFRFSNAVEARAQKSDEKVYLLRPETFESYFIMWRLTKEQKYRDW 445
                        PE +   N  E   +K     + LRPE  ES   ++R TK++ + + 
Sbjct: 356 ----------GFPPEFYNIHN--EEPGEK--RAAFPLRPEMVESLMYLYRATKDETWLEL 401

Query: 446 GWEAVQALEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAET 488
           G E + A+E   R + GY  + NV   +   +D  +S+FLAET
Sbjct: 402 GAEMIDAIESSARTKCGYATINNVKEHSI--EDRMESFFLAET 442


>Z68882-3|CAA93106.2|  568|Caenorhabditis elegans Hypothetical
           protein C47E12.3 protein.
          Length = 568

 Score =  135 bits (327), Expect = 6e-32
 Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 62/502 (12%)

Query: 63  LDSQSSVEKQRHIIEMMRHAWNNYKLYAWGKNELNPISKRA-----------HLSSVFGS 111
           +D Q  + K R   EM +  W+NY  +A+  +EL+PI  R            +++ V G 
Sbjct: 42  VDLQYGLAKTR---EMFQFGWDNYMEHAFPADELDPIHCRGRGHDHDNPDNINVNDVLGD 98

Query: 112 GEMGATIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCY 171
             +G  ++D LD+L V G  DEF+   + + +  +  E ++ + VFE+TIR +GGLL+ +
Sbjct: 99  YSLG--LIDTLDSLVVFGDADEFKRAVNLVIKTVSF-EKNTTVQVFESTIRVMGGLLAAH 155

Query: 172 ALTGDTIFR--------------DKAAEVADALLPAFE-TPTGLPYALINPSTKASRQYH 216
            +  D   R                A ++A  LLPAF+ T TG+PY  IN          
Sbjct: 156 MIAADKTNRFGPFYMSDYGGELLTLAHDLAGRLLPAFDGTATGIPYTRINLQKGI---LP 212

Query: 217 WADSNSILSELGTLHLEFSYLSDVTGREVYKNKVDKIREVLYTI-EKPGDLYPNYINPRT 275
              +++  S  G+L LEF  LS + G + Y+    ++ E L+ +  +   L+ N I+ +T
Sbjct: 213 GTTNSTCTSGAGSLLLEFGVLSKLLGDDTYERLARRVNEKLWNLRNEVTGLHGNLIDIQT 272

Query: 276 GQWGQRHISLGALGDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAY 335
           G+W      LGA  DSFYEY+LK+++    G+++   M++ +       M R    G + 
Sbjct: 273 GEWLGHLAGLGAGIDSFYEYMLKSYILF--GNQRDLDMYNESFARITTYMRR----GRSR 326

Query: 336 LAELKYGWVIEEKMEHLSCFAGGMFALAATTLENSFSERYMDVARKLTHTCHES-YFRSE 394
            + L+    I   ++      G        +L+ SF+   +         CH + Y+   
Sbjct: 327 CSSLEGDIPIYVNVDSRD---GSTSNTWIDSLQASFAGVLVLAGEVDEAVCHHALYYAIW 383

Query: 395 TKLG--PEAFRFSNAVEARAQKSDEKVYLLRPETFESYFIMWRLTKEQKYRDWGWEAVQA 452
            K G  PE F +      + Q  D   Y LRPE  ES ++++  TK   Y+  G E + +
Sbjct: 384 KKYGVLPERFNW------QLQAPDVSFYPLRPEFVESTYLLYTATKNPFYQHVGLEILDS 437

Query: 453 LEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAETXXXXXXXXXXXXXXXXXEW---VF 509
           LE   RV+ G+  + +V   +   +D  +S+FL+ET                 +    +F
Sbjct: 438 LETITRVKCGFATVHDVI--DGSLEDRMESFFLSETLKYLYLLFDVDHPINKEQQESVLF 495

Query: 510 NTEAHPLPIKGKNPLYRMASTP 531
           +TE H  PI   +PL+ +  TP
Sbjct: 496 STEGHIFPI---SPLFNLPPTP 514


>Z68751-7|CAA92977.2|  319|Caenorhabditis elegans Hypothetical
           protein T05E11.6 protein.
          Length = 319

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 185 EVADALLPAFETPTGLPYALINPSTKASRQYHWADSNSILSELGTLHLEFSYLSDV 240
           ++A A+   FE        +I  S +++  Y W DS ++LS   +L  E SY  DV
Sbjct: 174 DLAYAIQTMFEDNRYHEMLVIADSCRSASMYEWIDSPNVLSLSSSLTHEESYSYDV 229


>U80441-5|AAB37654.1|  207|Caenorhabditis elegans Atp synthase
           subunit protein 3,isoform a protein.
          Length = 207

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 117 TIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGD 176
           T ++ + T   +GLT E       +AE+  +N+++S +S FE+ +R   G L     + +
Sbjct: 84  TAIEAISTK--LGLTKETGNFLGLLAENGRLNKLESVVSSFESIMRAHRGELFVQVTSAE 141

Query: 177 TIFRDKAAEVADAL 190
            +       ++DAL
Sbjct: 142 ELSSSNQKALSDAL 155


>U80441-4|AAR25649.1|  228|Caenorhabditis elegans Atp synthase
           subunit protein 3,isoform b protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 117 TIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGD 176
           T ++ + T   +GLT E       +AE+  +N+++S +S FE+ +R   G L     + +
Sbjct: 105 TAIEAISTK--LGLTKETGNFLGLLAENGRLNKLESVVSSFESIMRAHRGELFVQVTSAE 162

Query: 177 TIFRDKAAEVADAL 190
            +       ++DAL
Sbjct: 163 ELSSSNQKALSDAL 176


>AC024859-12|AAK29966.1|  477|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.16 protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 218 ADSNSILSELGTLHLE-FSYLSDVTGREVYKNKVDKIREVLYTIEKPGDLYPNYIN 272
           AD + + +++   H + FS LS  TG  V  +K+  +  VLY     G   P+++N
Sbjct: 141 ADKSWLSAQVDIEHRDLFSLLSQKTGWHVTGSKISDVFNVLYRKHANGVAQPDWVN 196


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.318    0.132    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,653,577
Number of Sequences: 27539
Number of extensions: 509421
Number of successful extensions: 1178
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1128
Number of HSP's gapped (non-prelim): 16
length of query: 539
length of database: 12,573,161
effective HSP length: 85
effective length of query: 454
effective length of database: 10,232,346
effective search space: 4645485084
effective search space used: 4645485084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)