Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002424-TA|BGIBMGA002424-PA|IPR000555|Mov34/MPN/PAD-1
(404 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 181 1e-46
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 44 3e-05
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 41 3e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.22
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 29 0.89
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 3.6
SPAC3G9.16c |bet5|SPAC688.15|TRAPP complex subunit Bet5 |Schizos... 27 4.7
SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr ... 27 6.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 8.3
SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces p... 26 8.3
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 181 bits (441), Expect = 1e-46
Identities = 88/195 (45%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 211 PPSRPHNDSSLGGALYGSHRLRTVVVPXXXXXXXXXXXXDNTTRNIETCGILAGILERNQ 270
P +P + G LRT+ +P NT +N+ETCGIL G L +N
Sbjct: 240 PRPKPAGTFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNA 299
Query: 271 LKITHVIVPKQSGTPDSCSTNNEEEIFHYQDQHNLITLGWIHTHPTQTAFLSSVDLHTQC 330
ITH+++P Q T D+C T +E +F +QD+HNL+TLGWIHTHPTQT F+SSVDLHT C
Sbjct: 300 FFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQTCFMSSVDLHTHC 359
Query: 331 SYQLMMAEAIAIVCAPKYNETGYFALTPDYGMQFIANCRQSG-FHPHPNDP-PLFHNVSH 388
SYQLM+ EAIAIV AP N +G F L G+Q I CR+ G FHPH + H
Sbjct: 360 SYQLMLPEAIAIVMAPSKNTSGIFRLLDPEGLQTIVKCRKPGLFHPHEGKVYTMVAQPGH 419
Query: 389 INVDDAAPIEMVDLR 403
+ + + +++VDLR
Sbjct: 420 VR-EINSKLQVVDLR 433
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/114 (22%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 13 LASMEPSARVKQLANYGTMVDVDPNVPPRRYYRSGLEMVRMANVYLAEGSLENAYILYMK 72
L E +++A+ D + N+P + + R+ + + A+VY++E N L +
Sbjct: 4 LQGSEAPLSYEEIASRAGAFDFNKNIPLKNWLRTSTTISKQAHVYVSEHDYSNGVFLLFR 63
Query: 73 FMTLFLEKIRKHPEYSSVPAQVKSVNQGKLKEVMPKAEKLKQKLLDQYAKEHAQ 126
+ LF+ K +KHP+ ++ ++ QG ++ + + E +K + +QY + Q
Sbjct: 64 YCELFM-KCQKHPDAAAYKKELFDYYQG-VRNALEEIELIKPIVKEQYEQYQCQ 115
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 44.4 bits (100), Expect = 3e-05
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 256 IETCGILAG-ILERNQLKITHVIVPKQSGTP------DSCSTNNEEEIFHYQDQHNLITL 308
+E G++ G ++ +++ V QSGT D N ++ + ++ +
Sbjct: 50 MEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMV-V 108
Query: 309 GWIHTHPTQTAFLSSVDLHTQCSYQLMMAEAIAIVCAP 346
GW H+HP +LSSVD++TQ S++ + A+A+V P
Sbjct: 109 GWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDP 146
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 41.1 bits (92), Expect = 3e-04
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 256 IETCGILAGILERNQLKITHVIVPKQSGTPDSCSTNNEEEIFHYQDQHNLI--------T 307
+E G + G +E L I GT + + E + + Q H L
Sbjct: 55 LEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQ-YHTLCKSVYRHENV 113
Query: 308 LGWIHTHPTQTAFLSSVDLHTQCSYQLMMAEAIAIVCAPKYN-ETGYFALTP--DYGMQF 364
+GW H+HP +LS VD+ TQ Q +A+V PK + E+ Y + Y +
Sbjct: 114 IGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGN 173
Query: 365 IANCRQSGFHPHPNDPPLFHNVSHINVDDA 394
+ R H HP+ LF N+ ++DA
Sbjct: 174 DGSIRTKSRH-HPS--VLFKNLPSSKIEDA 200
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.22
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 304 NLITLGWIHTHPTQTAFLSSVDLHT 328
+L LGWIHT ++ +LSSVD+ T
Sbjct: 2199 DLEPLGWIHTQSSELPYLSSVDVTT 2223
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 29.5 bits (63), Expect = 0.89
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 152 QADENKRDGNSTIPHLLNNEQWVVSPSAP-AVDRVLYPDDFAAEPPQAPPHHYQPVPPLI 210
Q ENK+ T P + + P +++R P FA Q+ PH P
Sbjct: 86 QLKENKKPKLPTTPQTPKTPKRTIQIVTPKSLNRTCNPVPFATRLLQSTPHRQLFPPTPS 145
Query: 211 PPSRPHNDSSLGGALYGSHRLRTVV 235
PS P +S+ +L S+R VV
Sbjct: 146 TPSTPSYNSTAKLSLRKSYRSAGVV 170
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 176 SPSAPAVDRVLYPDDFAAEPPQAPPHHYQPVPP 208
S AP V R + A++PPQ P P+PP
Sbjct: 244 SSVAPFVPRRQFSVSSASDPPQTPISMSPPIPP 276
>SPAC3G9.16c |bet5|SPAC688.15|TRAPP complex subunit Bet5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 67 YILYMKFMTLFLEKIRKHPEYSSVP 91
++L + TL++E + KHP Y+ VP
Sbjct: 104 HVLQQIYTTLYVEFVVKHPLYTHVP 128
>SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 481
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 45 RSGLEMVRMANVYLAEGSLENAYILYMKFMTLFLEKIRKHPEYSSVPAQVKSVNQGKLKE 104
++GLE+ ++A + LE Y + K T L++I + Y + + G+L++
Sbjct: 353 QTGLEIPQLAQELV---QLERHYTHFAKAYTALLQEIHRRQTYENCVRSIVDEFVGRLEK 409
Query: 105 VMPKAEKLKQKLLDQY 120
K + +QY
Sbjct: 410 EQQAEAKCRIDFFNQY 425
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 174 VVSPSAPAVDRVLYPDDFAAE--PPQAPPHHYQPVPPLIPPS 213
+ SP P V +P + PP P H P P+ P S
Sbjct: 923 IASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQS 964
>SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 359
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 287 SCSTNNEEEIFHYQDQHNLITLGWIHTHPTQTAFLSSVD 325
+C E++F ++H L TL W + PT +++ +D
Sbjct: 201 ACKNIYAEDLFIRMERHILDTLDWDISIPTPASYIPVLD 239
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,908,472
Number of Sequences: 5004
Number of extensions: 79021
Number of successful extensions: 225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 215
Number of HSP's gapped (non-prelim): 13
length of query: 404
length of database: 2,362,478
effective HSP length: 74
effective length of query: 330
effective length of database: 1,992,182
effective search space: 657420060
effective search space used: 657420060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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