GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002423-TA|BGIBMGA002423-PA|IPR006622|Zinc finger,
CDGSH-type
         (128 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    24   1.4  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    23   2.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   2.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   3.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   3.3  
AY062195-1|AAL58556.1|  139|Anopheles gambiae cytochrome P450 CY...    22   7.6  

>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family
          protein Anob-1 protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 10 SQSSAQLGKRMCGDYAKVRVK 30
          SQ     GK +CG+Y + R+K
Sbjct: 61 SQDVINQGKCLCGEYIRARLK 81


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 23  DYAKVRVKDWLALIPPTVVVGGISYYSYQTIKKAREAGSG 62
           DY     +DW A  P  + +  +   SY+ I ++   G G
Sbjct: 183 DYGSGSSRDWAAKGPYLLGIKAVIAESYERIHRSNLVGMG 222


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 92  RCWRSKNWPYCDGSHGPHNKETG 114
           + W   +  Y DG+  PHN++ G
Sbjct: 823 KLWDGYSLLYVDGNDYPHNQDLG 845


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 94   WRSKNWPYCDGSHGPHNKETGD 115
            W   +W   D  H P N E+G+
Sbjct: 1188 WHGPDWLVKDPKHWPKNIESGN 1209


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 108 PHNKETGDNTGPVVVRHKP 126
           PH ++TG    P  + H+P
Sbjct: 146 PHQRDTGPALFPAPISHRP 164


>AY062195-1|AAL58556.1|  139|Anopheles gambiae cytochrome P450
          CYP4H18 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 24 YAKVRVKDWLALIPPTVVVG 43
          Y  + +K+ L L+PP  ++G
Sbjct: 61 YLDMVIKESLRLVPPVPIIG 80


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,678
Number of Sequences: 2123
Number of extensions: 5340
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 6
length of query: 128
length of database: 516,269
effective HSP length: 57
effective length of query: 71
effective length of database: 395,258
effective search space: 28063318
effective search space used: 28063318
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)