Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002422-TA|BGIBMGA002422-PA|undefined
(196 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0361 - 2583296-2583652,2584269-2584461,2584725-2584978 40 0.001
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 30 1.1
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 29 2.5
04_04_1535 + 34205426-34205593,34205697-34206869 29 3.3
06_01_0495 - 3546131-3547588 28 4.4
03_05_0717 + 27097367-27097621,27097744-27097866,27098136-270983... 28 4.4
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 28 5.8
04_03_0242 + 13253268-13253317,13254522-13254573,13254654-132547... 27 7.6
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 27 7.6
>06_01_0361 - 2583296-2583652,2584269-2584461,2584725-2584978
Length = 267
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 92 IVRLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTDILLAHEDDCATHKCDEIYDALQD- 150
++R++++Y RS+ P H+ P Q F DI+ H+ A + ++YDAL D
Sbjct: 146 LLRVVLIYCRSSTKP--QHQWPI-----KQKNFTLDIIYLHDKPTADNCPQKVYDALVDA 198
Query: 151 ---LDNGYSYVFEVSRNATKI---HDCIAKLLAHPLQRPLQKNTD 189
+ Y+ E + +I CI LL+HPLQR +Q + D
Sbjct: 199 LEHVSQYEGYILETGQGLARILFRQTCI--LLSHPLQRCIQDDLD 241
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 119 RSQIYFYTDILLAHEDDCATHKCDEIYDALQDLDNGYSYVFEVSRNATKIHDCIAKLLAH 178
+++ + YT I +A +DD T +IY L D D S+ + T+ + +AK
Sbjct: 615 KAEAHLYTIIKVARDDDLTTQIGKDIYFDLVDHDKVPSFRIQKQMPFTQFKEEVAKEFGI 674
Query: 179 PLQ 181
P Q
Sbjct: 675 PTQ 677
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 28 QDAGACWTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRH 73
QDA CWTQ + +++ H E+ ++ + E VY L H
Sbjct: 196 QDAEECWTQ-LVYTLSQTLTSETRVHCAESGEESLERESVYSLKCH 240
>04_04_1535 + 34205426-34205593,34205697-34206869
Length = 446
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 92 IVRLLILYGRSNCVPVIPHEDPCFQYIRSQIYFYTD 127
+VR +L R NC+P PH+ P + R FY D
Sbjct: 373 LVRSKVLDVRLNCIPNFPHQRPALECAR----FYAD 404
>06_01_0495 - 3546131-3547588
Length = 485
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 104 CVPVIPHE-DPCFQYI---RSQIYFYTDILLAHEDDCATHKCDEIYDALQDL 151
C V+PH D FQ+ + I+FY D + + D + + D L+++
Sbjct: 400 CTVVLPHSFDTFFQFTYDYQGGIFFYVDYAMIYRYDVERRVVERVVDMLEEM 451
>03_05_0717 +
27097367-27097621,27097744-27097866,27098136-27098303,
27098393-27100072
Length = 741
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 9 FFHTKHAISKKTEFALITLQDAGACWTQ 36
FF TK+ I+ + + A +DAG W Q
Sbjct: 133 FFETKNPITSQGDIAAAVSEDAGVTWQQ 160
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 141 CDEIYDALQDLDNGYSYVFEVSRNATKIHDCIAKLLAHP 179
CDE + L G Y++++ +HD +A L+ P
Sbjct: 700 CDECWKLLLVTRRGLMYIWDLYTRTCVLHDSLASLVTSP 738
>04_03_0242 +
13253268-13253317,13254522-13254573,13254654-13254730,
13254804-13254937,13255645-13255815,13255894-13256035,
13256257-13256443,13256932-13256998,13257846-13257892,
13258623-13258629,13258716-13258786,13259229-13259339,
13260404-13260466,13261050-13261187,13261721-13261826,
13262101-13262147,13262416-13262460,13262538-13262604,
13262683-13262737,13263008-13263214,13264723-13264810,
13264940-13265021,13265274-13265320,13265782-13265941,
13266058-13266224,13266360-13266659,13267144-13267200
Length = 914
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 10 FHTKHAISKKTEFALITLQDAGACWTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYE 69
FH K ++++ L ++G CW VK+ + + ++ S E++YE
Sbjct: 433 FHLKWLKDSHKDYSIKLLDESGGCWRDLLVPIVKEA-----WKNCKKGDSSIAIAERIYE 487
Query: 70 LIR 72
+++
Sbjct: 488 MVK 490
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 73 HHIEIPMMK-PGESLLPPPYIVRLLILYGRSN 103
H IE+P PG P P+++ +L + GRSN
Sbjct: 34 HPIEVPPTAVPGGPREPGPHVIEVLRIKGRSN 65
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.139 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,906,906
Number of Sequences: 37544
Number of extensions: 239375
Number of successful extensions: 644
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 638
Number of HSP's gapped (non-prelim): 9
length of query: 196
length of database: 14,793,348
effective HSP length: 78
effective length of query: 118
effective length of database: 11,864,916
effective search space: 1400060088
effective search space used: 1400060088
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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