GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002422-TA|BGIBMGA002422-PA|undefined
         (196 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    28   0.21 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.1  

>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 108 IPHEDPCFQYIRSQIYFYTDILLAHEDDCATHKCDEIYDALQDLD 152
           +P ED C + + +QI  Y   L  + ++C     D + +  +++D
Sbjct: 184 LPDEDHCMKLLHAQIDQYEQRLRTNVEECHDKLADHLAEQRREID 228


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 3    KRILDFFFHTKHAISKKTEFALI 25
            K++  FFFHTK  I +     ++
Sbjct: 1147 KQLSMFFFHTKETIQQPANVTMV 1169


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 40  SNVKDLISAIDYAHAEEATSDTFDFEKVYELIRHHIEIPMMKPGE 84
           S+V   I  ++Y H    T +  ++ +V  LI     + M +PGE
Sbjct: 290 SSVVSTILILNYHHRNSDTHEMSEWIRVVFLIWLPFILRMSRPGE 334


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,575
Number of Sequences: 2123
Number of extensions: 9976
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 4
length of query: 196
length of database: 516,269
effective HSP length: 61
effective length of query: 135
effective length of database: 386,766
effective search space: 52213410
effective search space used: 52213410
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 46 (22.6 bits)