GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002422-TA|BGIBMGA002422-PA|undefined
         (196 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    25   0.63 
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    25   0.63 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.9  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
          protein.
          Length = 116

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 45 LISAIDYAHAEEATSDTFDFEKVYELI 71
          ++S + + +AEE  SD +D+  + E++
Sbjct: 10 ILSLLTWTYAEELYSDKYDYVNIDEIL 36


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
          protein.
          Length = 116

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 45 LISAIDYAHAEEATSDTFDFEKVYELI 71
          ++S + + +AEE  SD +D+  + E++
Sbjct: 10 ILSLLTWTYAEELYSDKYDYVNIDEIL 36


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 167 KIHDCIAKLLAHPLQRPLQKNTDYSFGSR 195
           K + C+   L H  Q PL   +D S  SR
Sbjct: 426 KCYFCLDGKLPHDDQPPLSPQSDSSSSSR 454


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.139    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,225
Number of Sequences: 429
Number of extensions: 2462
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 196
length of database: 140,377
effective HSP length: 55
effective length of query: 141
effective length of database: 116,782
effective search space: 16466262
effective search space used: 16466262
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)