GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002421-TA|BGIBMGA002421-PA|undefined
         (88 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26652-1|CAA81393.1|  993|Homo sapiens FLT3 receptor tyrosine ki...    28   5.3  
U02687-1|AAA18947.1|  993|Homo sapiens serine/threonine protein ...    28   5.3  
BC126350-1|AAI26351.1|  993|Homo sapiens fms-related tyrosine ki...    28   5.3  
BC036028-1|AAH36028.1|  596|Homo sapiens FLT3 protein protein.         28   5.3  
AL591024-3|CAH70634.1|  996|Homo sapiens fms-related tyrosine ki...    28   5.3  
AL445262-1|CAI17231.1|  996|Homo sapiens fms-related tyrosine ki...    28   5.3  
AL356915-1|CAI12447.1|  996|Homo sapiens fms-related tyrosine ki...    28   5.3  
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p...    27   7.0  

>Z26652-1|CAA81393.1|  993|Homo sapiens FLT3 receptor tyrosine
           kinase precursor protein.
          Length = 993

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>U02687-1|AAA18947.1|  993|Homo sapiens serine/threonine protein
           kinase protein.
          Length = 993

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>BC126350-1|AAI26351.1|  993|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 993

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>BC036028-1|AAH36028.1|  596|Homo sapiens FLT3 protein protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>AL591024-3|CAH70634.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>AL445262-1|CAI17231.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>AL356915-1|CAI12447.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 27  IPSKNWRAAAYTNPNETEELQTAVW 51
           +PS  W+  +  +PN TEE+   VW
Sbjct: 459 LPSWTWKKCSDKSPNCTEEITEGVW 483


>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
           protein.
          Length = 1125

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 38  TNPNETEELQTAVWCSGAMDLSIFLFGVKKDNDANILAAREKHSYLATN 86
           T+  + E+L   V  +   ++ IF+ GV K ND N     ++ + +AT+
Sbjct: 907 TDSRDKEKLTEVVKNASDTNVEIFVIGVVKKNDPNFEIFHKEMNLIATD 955


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.128    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,411,596
Number of Sequences: 224733
Number of extensions: 379194
Number of successful extensions: 497
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 489
Number of HSP's gapped (non-prelim): 8
length of query: 88
length of database: 73,234,838
effective HSP length: 66
effective length of query: 22
effective length of database: 58,402,460
effective search space: 1284854120
effective search space used: 1284854120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)