GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002421-TA|BGIBMGA002421-PA|undefined
         (88 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   1.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   6.9  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        19   9.1  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 28  PSKNWRAAAYTNPNETEELQTAVWCSGAMDLSIFLFGVKKDND 70
           P+  W+ A  +   E EEL+   +     + ++ L  VK+D +
Sbjct: 739 PTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDRE 781


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 28  PSKNWRAAAYTNPNETEELQTAVWCSGAMDLSIFLFGVKKDND 70
           P+  W+ A  +   E EEL+   +     + ++ L  VK+D +
Sbjct: 735 PTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDRE 777


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like
          receptor 2 protein.
          Length = 581

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 60 IFLFGVKKDNDANILAAREKHSYLATN 86
          IF+ G+  +    ++ AR K  + ATN
Sbjct: 63 IFVTGLVGNVSTCVVIARNKSMHTATN 89


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 21 LGKDLKIPSKNWRAAAY 37
          L KD+ + S N+R  A+
Sbjct: 45 LPKDVVVVSSNYRVGAF 61


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.128    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,387
Number of Sequences: 429
Number of extensions: 756
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 88
length of database: 140,377
effective HSP length: 48
effective length of query: 40
effective length of database: 119,785
effective search space:  4791400
effective search space used:  4791400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)
S2: 37 (19.0 bits)