Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002420-TA|BGIBMGA002420-PA|undefined
(80 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 0.41
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 0.41
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 26 0.55
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 25 1.7
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 24 2.2
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 24 2.2
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 24 2.9
SPAC664.08c |||traub transciption factor family protein |Schizos... 24 2.9
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 24 2.9
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 23 3.8
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 23 3.8
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 23 3.8
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 23 3.8
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 23 5.1
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 23 5.1
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 23 6.7
SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 23 6.7
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 23 6.7
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 23 6.7
SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces pombe... 22 8.9
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 22 8.9
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 22 8.9
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 22 8.9
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 22 8.9
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.6 bits (56), Expect = 0.41
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 33 DDDIERIQSIQFFLSEIPNDVETSSLRAE 61
DD +RI SI+F +S + +TSSL+ E
Sbjct: 84 DDCQQRIDSIRFLVSSLKLTDDTSSLKIE 112
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.6 bits (56), Expect = 0.41
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 25 QDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQR 70
+ F D ++++ + IQSI F+ +I ETS++ + +S R
Sbjct: 142 EHFLDKKTEETVAFIQSIDNFVEKILRHAETSAIMDLLLKFISMDR 187
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 26.2 bits (55), Expect = 0.55
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 3 RRRLRDEDIEDFLNIPSGSE----DGQDFSDAESDDDIERIQSIQFFLSEIPND 52
+R+L +E F N S +E D +F +AE+ D+E + Q F E +D
Sbjct: 44 KRQLAEEKKSLFENSDSENEKDLIDADEFEEAETLSDLEHDEEPQTFADEFIDD 97
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 24.6 bits (51), Expect = 1.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 10 DIEDFLNIPSGSEDGQDFSDAESDDDIERIQS 41
D+ED +I + G+DFSD E+ E +S
Sbjct: 567 DLEDNSDIDESANAGKDFSDDENIGSDEEDES 598
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 24.2 bits (50), Expect = 2.2
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 14 FLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRA 60
FL+ SGS + + + ++ SD IE + +S ND+ +S ++
Sbjct: 163 FLDKSSGSMEIESWDNSTSDSIIESSSRLHESISLRENDIRSSDSKS 209
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 24.2 bits (50), Expect = 2.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 39 IQSIQFFLSEIPNDVETSSLRAEISVL 65
+Q I L +P SSLRAE+++L
Sbjct: 266 LQDISIRLIIVPRQARLSSLRAELALL 292
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 23.8 bits (49), Expect = 2.9
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 11 IEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQR 70
+E LN P D D +D+D E + SIQ LS + + +S S S
Sbjct: 130 VETHLN-PDTDPDIPSDEDVLTDEDTEEVASIQPALSTSVSSLSLASTAMSKSASASEFS 188
Query: 71 G 71
G
Sbjct: 189 G 189
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 23.8 bits (49), Expect = 2.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 29 DAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRG 71
D +++D + Q LSE ND TS+ + L+S G
Sbjct: 405 DEQTEDLFSSLLGQQLDLSETANDTNTSNFVEKDDELISSNDG 447
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 23.8 bits (49), Expect = 2.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 12 EDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSE 48
+DF+ G +DG + SD+ + E IQ + L +
Sbjct: 850 QDFIKNNRGVDDGANLSDSFLTEVYEEIQKNEIVLKD 886
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 23.4 bits (48), Expect = 3.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 46 LSEIPNDVETSSLRAEISVLVSRQRGCY 73
L++ PN SS R E + VSR+ C+
Sbjct: 64 LTKSPNAYHASSAREEKDLQVSRRDTCF 91
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 23.4 bits (48), Expect = 3.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 33 DDDIERIQSIQFFLSEIPNDVETSSL 58
D D+++I + + L ++P+DV+ L
Sbjct: 20 DPDVQQIDADEDLLDDVPDDVDCVEL 45
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 23.4 bits (48), Expect = 3.8
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 17 IPSGSEDGQDFSDAESDDDIE 37
+ + +++G+D D E DD+I+
Sbjct: 184 LKAANDEGEDVKDNEQDDNID 204
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 23.4 bits (48), Expect = 3.8
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 2 SRRRLRDEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSL 58
S+RR+ ++DF G DGQDF + + I+ + ++E +D E S L
Sbjct: 693 SQRRMT---LDDFCRNVRGVNDGQDFDRNFLSEIYKAIKENEIIVAE-EHDTELSFL 745
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 23.0 bits (47), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 12 EDFLNIPSGSEDGQDFSDAESDDDI 36
EDF + + D S A+SDD+I
Sbjct: 445 EDFYGVKNSDTDTDSDSLADSDDEI 469
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 23.0 bits (47), Expect = 5.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 6 LRDEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQ 40
L DE I + +NIPS + +F D E Q
Sbjct: 117 LLDESISNPINIPSTEVESSNFGQTRYDQVPENPQ 151
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 22.6 bits (46), Expect = 6.7
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 20 GSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSS 57
G +D ++++ D + + +++F +S+IP ETSS
Sbjct: 423 GLQDDEEYNGIPVD--VNELLNVEF-ISQIPMSTETSS 457
>SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 22.6 bits (46), Expect = 6.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 8 DEDIEDFLNIPSGSEDGQDFS 28
D++I+DFL+ P ++D + S
Sbjct: 140 DKEIDDFLHYPLPAKDAKKLS 160
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 22.6 bits (46), Expect = 6.7
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 9 EDIEDFLNIPSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPNDVETSSLR 59
ED +FL+IP + AE +++ R+ ++++P +++ S R
Sbjct: 112 EDYAEFLHIPDTKFTDMNKVRAEIENETLRVAGANKGINKLPINLKIYSTR 162
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 22.6 bits (46), Expect = 6.7
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 28 SDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVSRQRGCYEILKIV 79
+ A + DD E + L E P V++ S A + SR+ E K+V
Sbjct: 109 AQASNPDDEEEFVMEEDNLGEAPLLVDSESYEASVKADTSRKAYDKEFKKVV 160
Score = 22.6 bits (46), Expect = 6.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 28 SDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEISVLVS 67
S + DD + I FLS +P +E R E+ L++
Sbjct: 351 SSTKVDDPVAVASYILQFLSRVPGQLERMFQRYELPPLLN 390
>SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 460
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 26 DFSDAESDDDIERIQSIQFFLSEIPNDVETSSLRAEIS 63
D SD+ES+D + + +F + ++ + A+IS
Sbjct: 357 DISDSESEDLSDILSDSEFSIGNRNKNIGNNEYSAQIS 394
>SPBC12C2.06 |||ATP-dependent RNA helicase
Dbp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 22.2 bits (45), Expect = 8.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 20 GSEDGQDFSDAESDDDIERI 39
G E D++ +SD++++RI
Sbjct: 6 GQESKTDWASLDSDEEVQRI 25
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 22.2 bits (45), Expect = 8.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Query: 1 MSRRRLRDEDIEDFLNIPSGSEDG-QDFSDAESDD 34
+SR+ +E+ E+ S ED DFSD E+DD
Sbjct: 391 LSRKEEEEEEDEE----ASDFEDSFADFSDGEADD 421
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 3 RRRLRDEDIEDFLNIPSGSEDGQDFSDAESDDD 35
+++L +E I + + ED Q D+ DDD
Sbjct: 363 QQKLENERIVEEIKKNGIQEDSQSTDDSSKDDD 395
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 22.2 bits (45), Expect = 8.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 8 DEDIEDFLNIPSGSEDGQDFSDAESDDDIERIQS 41
D DI+D + +GSED + +D R +S
Sbjct: 463 DIDIDDIAQVDNGSEDLGSIENKTVEDTGNREKS 496
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.135 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,997
Number of Sequences: 5004
Number of extensions: 13225
Number of successful extensions: 59
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 26
length of query: 80
length of database: 2,362,478
effective HSP length: 59
effective length of query: 21
effective length of database: 2,067,242
effective search space: 43412082
effective search space used: 43412082
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)
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