Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002420-TA|BGIBMGA002420-PA|undefined
(80 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017299-1|AAH17299.1| 400|Homo sapiens TRIM47 protein protein. 31 0.77
BC009225-1|AAH09225.2| 266|Homo sapiens TRIM47 protein protein. 31 0.77
BC006153-1|AAH06153.1| 403|Homo sapiens Unknown (protein for IM... 31 0.77
AY026763-1|AAK07687.1| 638|Homo sapiens gene overexpressed in a... 31 0.77
AK022240-1|BAB13994.1| 336|Homo sapiens protein ( Homo sapiens ... 29 1.8
AL136527-3|CAB89419.1| 1901|Homo sapiens A kinase (PRKA) anchor ... 29 2.4
AF176555-1|AAF07045.1| 1901|Homo sapiens A-kinase anchoring prot... 29 2.4
AB014529-1|BAA31604.2| 1272|Homo sapiens KIAA0629 protein protein. 29 2.4
AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein. 28 5.5
AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling fa... 28 5.5
AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein. 28 5.5
AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein. 28 5.5
>BC017299-1|AAH17299.1| 400|Homo sapiens TRIM47 protein protein.
Length = 400
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 18 PSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPND 52
P G+EDG D+E+D + + ++S SE P D
Sbjct: 149 PGGNEDGPQKLDSEADAEPQDLESTNLLESEAPRD 183
>BC009225-1|AAH09225.2| 266|Homo sapiens TRIM47 protein protein.
Length = 266
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 18 PSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPND 52
P G+EDG D+E+D + + ++S SE P D
Sbjct: 15 PGGNEDGPQKLDSEADAEPQDLESTNLLESEAPRD 49
>BC006153-1|AAH06153.1| 403|Homo sapiens Unknown (protein for
IMAGE:3535476) protein.
Length = 403
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 18 PSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPND 52
P G+EDG D+E+D + + ++S SE P D
Sbjct: 152 PGGNEDGPQKLDSEADAEPQDLESTNLLESEAPRD 186
>AY026763-1|AAK07687.1| 638|Homo sapiens gene overexpressed in
astrocytoma protein.
Length = 638
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 18 PSGSEDGQDFSDAESDDDIERIQSIQFFLSEIPND 52
P G+EDG D+E+D + + ++S SE P D
Sbjct: 387 PGGNEDGPQKLDSEADAEPQDLESTNLLESEAPRD 421
>AK022240-1|BAB13994.1| 336|Homo sapiens protein ( Homo sapiens
cDNA FLJ12178 fis, clone MAMMA1000731, weakly similar to
CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1. ).
Length = 336
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 15 LNIPSGSEDGQDFSDAESDDDIERIQSI--QFFLSEIPNDVETSSLRAEISVL 65
L PS S Q+F D E+++ ++++Q+I L + DVE E +++
Sbjct: 160 LRFPSESTFMQEFGDLETEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETII 212
>AL136527-3|CAB89419.1| 1901|Homo sapiens A kinase (PRKA) anchor
protein 11 protein.
Length = 1901
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 12 EDFLNIPSGSEDGQDFSDAESDDDIE 37
ED L+ P+ DG D D E +D++E
Sbjct: 1776 EDNLSFPTSDSDGPDDKDEEHEDEVE 1801
>AF176555-1|AAF07045.1| 1901|Homo sapiens A-kinase anchoring protein
220 protein.
Length = 1901
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 12 EDFLNIPSGSEDGQDFSDAESDDDIE 37
ED L+ P+ DG D D E +D++E
Sbjct: 1776 EDNLSFPTSDSDGPDDKDEEHEDEVE 1801
>AB014529-1|BAA31604.2| 1272|Homo sapiens KIAA0629 protein protein.
Length = 1272
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 12 EDFLNIPSGSEDGQDFSDAESDDDIE 37
ED L+ P+ DG D D E +D++E
Sbjct: 1147 EDNLSFPTSDSDGPDDKDEEHEDEVE 1172
>AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.
Length = 2881
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 15 LNIPSGSEDGQDFSDAESDDDIERIQSI--QFFLSEIPNDVETSSLRAEISVL 65
L PS S Q+F D ++++ ++++Q+I L + DVE E +++
Sbjct: 1046 LRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETII 1098
>AY243500-1|AAQ24287.1| 2897|Homo sapiens chromatin remodeling factor
CHROM1 protein.
Length = 2897
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 15 LNIPSGSEDGQDFSDAESDDDIERIQSI--QFFLSEIPNDVETSSLRAEISVL 65
L PS S Q+F D ++++ ++++Q+I L + DVE E +++
Sbjct: 1046 LRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETII 1098
>AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.
Length = 2432
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 18 PSGSEDGQDFSDAESDDDIERIQSI--QFFLSEIPNDVE 54
PS SE +DF D ++++ ++++Q+I L + DVE
Sbjct: 851 PSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVE 889
>AB002306-1|BAA20767.3| 2759|Homo sapiens KIAA0308 protein.
Length = 2759
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 15 LNIPSGSEDGQDFSDAESDDDIERIQSI--QFFLSEIPNDVETSSLRAEISVL 65
L PS S Q+F D ++++ ++++Q+I L + DVE E +++
Sbjct: 923 LRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETII 975
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.135 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,776,919
Number of Sequences: 224733
Number of extensions: 332331
Number of successful extensions: 1544
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1534
Number of HSP's gapped (non-prelim): 14
length of query: 80
length of database: 73,234,838
effective HSP length: 58
effective length of query: 22
effective length of database: 60,200,324
effective search space: 1324407128
effective search space used: 1324407128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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